Male CNS – Cell Type Explorer

CB2936(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
688
Total Synapses
Post: 537 | Pre: 151
log ratio : -1.83
688
Mean Synapses
Post: 537 | Pre: 151
log ratio : -1.83
GABA(66.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LAL(L)49391.8%-1.7914394.7%
CentralBrain-unspecified264.8%-2.3853.3%
CRE(L)183.4%-2.5832.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB2936
%
In
CV
LAL156_b (R)1ACh6914.2%0.0
WEDPN7B (L)4ACh5110.5%0.8
LAL133_d (L)1Glu306.2%0.0
CB0683 (L)1ACh173.5%0.0
CRE003_b (R)3ACh173.5%0.7
PLP046 (L)3Glu173.5%0.5
WED032 (L)1GABA163.3%0.0
CB4112 (L)2Glu163.3%0.5
WED031 (L)3GABA153.1%1.0
CRE003_b (L)2ACh122.5%0.3
CB2088 (R)2ACh112.3%0.3
CB2088 (L)1ACh91.9%0.0
WED183 (L)1Glu91.9%0.0
WED167 (R)1ACh81.6%0.0
SIP087 (R)1unc81.6%0.0
LC33 (L)2Glu81.6%0.0
LAL133_c (L)1Glu71.4%0.0
CB2713 (L)1ACh71.4%0.0
LAL165 (R)1ACh71.4%0.0
CRE018 (L)3ACh61.2%0.7
WEDPN17_a2 (L)2ACh61.2%0.0
CB2550 (L)3ACh61.2%0.4
LAL050 (L)3GABA61.2%0.4
LAL063 (L)1GABA51.0%0.0
WEDPN18 (L)1ACh51.0%0.0
CRE013 (R)1GABA51.0%0.0
LHPV3a2 (R)2ACh51.0%0.2
WED144 (R)1ACh40.8%0.0
LAL128 (L)1DA40.8%0.0
LAL133_a (L)1Glu40.8%0.0
WEDPN7A (L)1ACh40.8%0.0
WED038 (L)2Glu40.8%0.5
SMP112 (L)2ACh40.8%0.5
PLP187 (R)3ACh40.8%0.4
SMP145 (R)1unc30.6%0.0
LAL031 (L)1ACh30.6%0.0
LHPV3a1 (R)1ACh30.6%0.0
SMP177 (L)1ACh30.6%0.0
OA-VUMa1 (M)1OA30.6%0.0
LAL034 (L)2ACh30.6%0.3
PLP078 (R)1Glu20.4%0.0
MBON26 (L)1ACh20.4%0.0
WED041 (L)1Glu20.4%0.0
CB2550 (R)1ACh20.4%0.0
MBON10 (L)1GABA20.4%0.0
AOTU030 (L)1ACh20.4%0.0
PLP187 (L)1ACh20.4%0.0
WED153 (L)1ACh20.4%0.0
WED017 (L)1ACh20.4%0.0
SIP081 (L)1ACh20.4%0.0
LAL164 (L)1ACh20.4%0.0
LAL072 (L)1Glu20.4%0.0
PS327 (R)1ACh20.4%0.0
SIP087 (L)1unc20.4%0.0
MBON26 (R)1ACh20.4%0.0
CRE003_a (L)2ACh20.4%0.0
WED145 (R)2ACh20.4%0.0
CB2357 (L)1GABA10.2%0.0
CB1956 (L)1ACh10.2%0.0
LHPV5e1 (L)1ACh10.2%0.0
SMP142 (L)1unc10.2%0.0
LHPV3a1 (L)1ACh10.2%0.0
LAL203 (L)1ACh10.2%0.0
SMP008 (R)1ACh10.2%0.0
SMP008 (L)1ACh10.2%0.0
LAL148 (L)1Glu10.2%0.0
LAL037 (L)1ACh10.2%0.0
CB2846 (L)1ACh10.2%0.0
CB1599 (L)1ACh10.2%0.0
LAL061 (L)1GABA10.2%0.0
CB4155 (L)1GABA10.2%0.0
CB2950 (L)1ACh10.2%0.0
LAL071 (L)1GABA10.2%0.0
LAL055 (L)1ACh10.2%0.0
WEDPN7C (L)1ACh10.2%0.0
CRE057 (L)1GABA10.2%0.0
CRE052 (L)1GABA10.2%0.0
SMP145 (L)1unc10.2%0.0
AOTU002_a (R)1ACh10.2%0.0
CB1841 (L)1ACh10.2%0.0
PLP161 (L)1ACh10.2%0.0
CL021 (L)1ACh10.2%0.0
FB4C (L)1Glu10.2%0.0
ExR3 (L)15-HT10.2%0.0
LAL142 (L)1GABA10.2%0.0

Outputs

downstream
partner
#NTconns
CB2936
%
Out
CV
LAL034 (L)4ACh4712.8%0.9
VES059 (L)1ACh3910.6%0.0
LAL052 (L)1Glu215.7%0.0
SMP456 (L)1ACh174.6%0.0
LAL037 (L)2ACh154.1%0.6
CRE018 (L)3ACh154.1%1.0
FB2D (L)3Glu123.3%0.9
CB1956 (L)3ACh123.3%0.7
LAL165 (R)1ACh102.7%0.0
CRE020 (L)1ACh82.2%0.0
CRE056 (L)2GABA82.2%0.5
MBON26 (L)1ACh71.9%0.0
LAL131 (L)1Glu71.9%0.0
LAL182 (L)1ACh71.9%0.0
ExR6 (L)1Glu71.9%0.0
LAL198 (L)1ACh71.9%0.0
SMP145 (L)1unc61.6%0.0
LCNOpm (L)1Glu61.6%0.0
LAL050 (L)3GABA61.6%0.0
SIP087 (R)1unc51.4%0.0
LAL195 (L)1ACh51.4%0.0
CRE107 (L)1Glu51.4%0.0
AVLP705m (L)2ACh51.4%0.2
LAL075 (L)1Glu41.1%0.0
SMP145 (R)1unc41.1%0.0
SMP142 (L)1unc41.1%0.0
IB076 (R)1ACh41.1%0.0
LAL170 (R)1ACh41.1%0.0
CRE003_b (L)2ACh41.1%0.5
CB0683 (L)1ACh30.8%0.0
PS233 (L)1ACh30.8%0.0
FB4C (L)1Glu30.8%0.0
LAL051 (L)1Glu30.8%0.0
CB2117 (L)2ACh30.8%0.3
CRE005 (L)2ACh30.8%0.3
LAL128 (L)1DA20.5%0.0
WEDPN17_a2 (L)1ACh20.5%0.0
LAL011 (L)1ACh20.5%0.0
WED167 (R)1ACh20.5%0.0
WEDPN17_a1 (L)1ACh20.5%0.0
LAL152 (L)1ACh20.5%0.0
LNOa (L)1Glu20.5%0.0
LAL030_a (L)2ACh20.5%0.0
CB2713 (L)2ACh20.5%0.0
FB2G_b (L)2Glu20.5%0.0
PLP063 (L)1ACh10.3%0.0
LAL123 (L)1unc10.3%0.0
LHPV5l1 (L)1ACh10.3%0.0
CB0325 (L)1ACh10.3%0.0
LNO1 (L)1GABA10.3%0.0
CB2088 (R)1ACh10.3%0.0
WED145 (R)1ACh10.3%0.0
LAL063 (L)1GABA10.3%0.0
CB3441 (L)1ACh10.3%0.0
WED155 (L)1ACh10.3%0.0
CB2846 (L)1ACh10.3%0.0
LAL071 (L)1GABA10.3%0.0
CB3065 (L)1GABA10.3%0.0
WEDPN7B (L)1ACh10.3%0.0
FB3C (L)1GABA10.3%0.0
ER1_a (L)1GABA10.3%0.0
CB2066 (L)1GABA10.3%0.0
ER1_b (L)1GABA10.3%0.0
CRE009 (L)1ACh10.3%0.0
CL055 (L)1GABA10.3%0.0
LAL115 (L)1ACh10.3%0.0
LAL144 (L)1ACh10.3%0.0
LAL072 (L)1Glu10.3%0.0
PFL2 (R)1ACh10.3%0.0
LAL156_b (R)1ACh10.3%0.0
SIP087 (L)1unc10.3%0.0
LAL139 (L)1GABA10.3%0.0
LHCENT11 (L)1ACh10.3%0.0