Male CNS – Cell Type Explorer

CB2638(L)

6
Total Neurons
Right: 3 | Left: 3
log ratio : 0.00
1,868
Total Synapses
Post: 1,346 | Pre: 522
log ratio : -1.37
622.7
Mean Synapses
Post: 448.7 | Pre: 174
log ratio : -1.37
ACh(95.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(L)53840.0%-1.0725749.2%
SIP(L)30022.3%-1.1813225.3%
SCL(L)24618.3%-1.946412.3%
SLP(L)19614.6%-2.19438.2%
ICL(L)614.5%-1.47224.2%
CentralBrain-unspecified50.4%-0.3240.8%

Connectivity

Inputs

upstream
partner
#NTconns
CB2638
%
In
CV
SLP075 (L)1Glu5512.8%0.0
SMP235 (L)1Glu4911.4%0.0
LoVP82 (L)2ACh34.38.0%0.2
ATL004 (L)1Glu29.76.9%0.0
CB2814 (L)5Glu296.8%0.5
CL234 (L)2Glu15.73.7%0.0
CL007 (L)1ACh112.6%0.0
CL042 (L)2Glu9.72.3%0.7
MeVP35 (L)1Glu8.72.0%0.0
LoVP67 (L)1ACh8.72.0%0.0
MeVP45 (L)1ACh6.31.5%0.0
CB3080 (L)2Glu5.71.3%0.2
AstA1 (L)1GABA5.71.3%0.0
aMe26 (R)3ACh51.2%0.5
MeVP34 (L)2ACh4.31.0%0.2
SLP074 (L)1ACh40.9%0.0
SMP046 (L)1Glu40.9%0.0
FS1B_b (R)5ACh40.9%0.4
PRW004 (M)1Glu3.70.9%0.0
SMP061 (L)2Glu3.70.9%0.3
CL086_e (L)4ACh3.70.9%0.5
AstA1 (R)1GABA3.30.8%0.0
CL012 (R)1ACh30.7%0.0
SMP743 (R)2ACh30.7%0.6
LHPV6f3_b (L)2ACh2.70.6%0.8
SLP252_c (L)1Glu2.70.6%0.0
aMe26 (L)3ACh2.70.6%0.4
CB3541 (L)2ACh2.70.6%0.0
SMP243 (L)3ACh2.70.6%0.4
LC36 (L)1ACh2.30.5%0.0
SMP243 (R)2ACh2.30.5%0.7
CB1685 (L)3Glu2.30.5%0.8
CB2572 (L)2ACh2.30.5%0.1
CB4022 (L)1ACh20.5%0.0
SMP386 (L)1ACh20.5%0.0
SMP181 (L)1unc20.5%0.0
SMP257 (L)1ACh1.70.4%0.0
SMP234 (L)1Glu1.70.4%0.0
FB6M (L)2Glu1.70.4%0.6
SMP371_a (L)1Glu1.70.4%0.0
FS1B_b (L)2ACh1.70.4%0.2
SMP192 (L)1ACh1.70.4%0.0
LoVP65 (L)1ACh1.70.4%0.0
CB2638 (L)2ACh1.70.4%0.2
CB1368 (L)1Glu1.30.3%0.0
LoVP60 (R)1ACh1.30.3%0.0
SMP236 (L)1ACh1.30.3%0.0
SMP297 (L)1GABA1.30.3%0.0
CL314 (L)1GABA1.30.3%0.0
CL107 (L)1ACh1.30.3%0.0
CL040 (L)2Glu1.30.3%0.5
PLP252 (L)1Glu1.30.3%0.0
SLP223 (L)2ACh1.30.3%0.5
SMP181 (R)1unc1.30.3%0.0
SMP044 (L)1Glu1.30.3%0.0
SMP091 (L)3GABA1.30.3%0.4
SLP360_a (L)1ACh1.30.3%0.0
SMP338 (L)2Glu1.30.3%0.0
CB3556 (L)1ACh10.2%0.0
PS038 (L)1ACh10.2%0.0
SMP082 (L)1Glu10.2%0.0
CL073 (L)1ACh10.2%0.0
CL008 (L)1Glu10.2%0.0
CB1823 (L)1Glu10.2%0.0
SLP435 (L)1Glu10.2%0.0
CL162 (L)1ACh10.2%0.0
5-HTPMPV01 (R)15-HT10.2%0.0
CL357 (R)1unc10.2%0.0
SLP088_a (L)3Glu10.2%0.0
LoVP17 (L)2ACh10.2%0.3
SMP743 (L)2ACh10.2%0.3
LoVP24 (R)1ACh0.70.2%0.0
ATL008 (R)1Glu0.70.2%0.0
CB1548 (L)1ACh0.70.2%0.0
LHPV6f3_b (R)1ACh0.70.2%0.0
CB1858 (L)1unc0.70.2%0.0
CB3951b (L)1ACh0.70.2%0.0
PLP023 (L)1GABA0.70.2%0.0
CL083 (L)1ACh0.70.2%0.0
SLP444 (L)1unc0.70.2%0.0
SMP161 (L)1Glu0.70.2%0.0
CB4133 (L)1Glu0.70.2%0.0
CB4087 (L)1ACh0.70.2%0.0
IB116 (L)1GABA0.70.2%0.0
SMP186 (R)1ACh0.70.2%0.0
SIP086 (L)1Glu0.70.2%0.0
SMP387 (L)1ACh0.70.2%0.0
SLP327 (L)1ACh0.70.2%0.0
CB3614 (R)1ACh0.70.2%0.0
LoVP64 (L)1Glu0.70.2%0.0
SMP142 (R)1unc0.70.2%0.0
SMP430 (L)2ACh0.70.2%0.0
5-HTPMPV01 (L)15-HT0.70.2%0.0
ExR3 (L)15-HT0.70.2%0.0
CB4023 (L)2ACh0.70.2%0.0
FS4C (R)2ACh0.70.2%0.0
FS4C (L)2ACh0.70.2%0.0
LHAV3n1 (L)2ACh0.70.2%0.0
SMP542 (L)1Glu0.30.1%0.0
CB2295 (L)1ACh0.30.1%0.0
CB3050 (L)1ACh0.30.1%0.0
CB3143 (L)1Glu0.30.1%0.0
CB2884 (L)1Glu0.30.1%0.0
SMP381_c (L)1ACh0.30.1%0.0
SLP361 (L)1ACh0.30.1%0.0
LC34 (L)1ACh0.30.1%0.0
CB1532 (L)1ACh0.30.1%0.0
SMP182 (L)1ACh0.30.1%0.0
SMP393 (L)1ACh0.30.1%0.0
LoVP17 (R)1ACh0.30.1%0.0
SMP057 (L)1Glu0.30.1%0.0
SMP371_b (L)1Glu0.30.1%0.0
CL008 (R)1Glu0.30.1%0.0
SLP355 (L)1ACh0.30.1%0.0
CL102 (L)1ACh0.30.1%0.0
SMP390 (L)1ACh0.30.1%0.0
SMP531 (L)1Glu0.30.1%0.0
LHPV6m1 (R)1Glu0.30.1%0.0
ATL021 (R)1Glu0.30.1%0.0
LoVCLo2 (R)1unc0.30.1%0.0
LoVCLo2 (L)1unc0.30.1%0.0
CL135 (R)1ACh0.30.1%0.0
DNp48 (L)1ACh0.30.1%0.0
OA-VPM3 (R)1OA0.30.1%0.0
CL089_b (L)1ACh0.30.1%0.0
SMP186 (L)1ACh0.30.1%0.0
FB6H (L)1unc0.30.1%0.0
DNpe048 (L)1unc0.30.1%0.0
SMP145 (R)1unc0.30.1%0.0
LoVP60 (L)1ACh0.30.1%0.0
OA-VPM3 (L)1OA0.30.1%0.0
CB1876 (L)1ACh0.30.1%0.0
CL182 (L)1Glu0.30.1%0.0
CB2300 (L)1ACh0.30.1%0.0
CB4070 (L)1ACh0.30.1%0.0
SMP326 (L)1ACh0.30.1%0.0
CB1178 (L)1Glu0.30.1%0.0
CB4158 (L)1ACh0.30.1%0.0
FB7E (L)1Glu0.30.1%0.0
CB1871 (R)1Glu0.30.1%0.0
CB0943 (L)1ACh0.30.1%0.0
SMP167 (L)1unc0.30.1%0.0
SLP387 (L)1Glu0.30.1%0.0
SLP402_b (L)1Glu0.30.1%0.0
SLP359 (L)1ACh0.30.1%0.0
CB3281 (L)1Glu0.30.1%0.0
CL280 (L)1ACh0.30.1%0.0
CL073 (R)1ACh0.30.1%0.0
FB8I (L)1Glu0.30.1%0.0
SMP189 (L)1ACh0.30.1%0.0
SMP184 (L)1ACh0.30.1%0.0
CL086_a (L)1ACh0.30.1%0.0
SMP188 (L)1ACh0.30.1%0.0
SLP207 (L)1GABA0.30.1%0.0
SMP182 (R)1ACh0.30.1%0.0
ATL023 (L)1Glu0.30.1%0.0
SLP214 (L)1Glu0.30.1%0.0
MeVP10 (L)1ACh0.30.1%0.0
SMP135 (R)1Glu0.30.1%0.0
FS3_d (R)1ACh0.30.1%0.0
FS3_a (R)1ACh0.30.1%0.0
FB8D (L)1Glu0.30.1%0.0
CB3074 (R)1ACh0.30.1%0.0
FS1B_a (R)1ACh0.30.1%0.0
SMP076 (L)1GABA0.30.1%0.0
CB3691 (R)1unc0.30.1%0.0
PRW032 (L)1ACh0.30.1%0.0
SLP334 (L)1Glu0.30.1%0.0
LoVP66 (L)1ACh0.30.1%0.0
SMP086 (L)1Glu0.30.1%0.0
SMP535 (L)1Glu0.30.1%0.0
CB1009 (L)1unc0.30.1%0.0
SMP566 (L)1ACh0.30.1%0.0
SMP047 (L)1Glu0.30.1%0.0
PLP121 (L)1ACh0.30.1%0.0
FB5AA (L)1Glu0.30.1%0.0
PLP197 (L)1GABA0.30.1%0.0
LHPV3c1 (L)1ACh0.30.1%0.0
OA-VUMa3 (M)1OA0.30.1%0.0

Outputs

downstream
partner
#NTconns
CB2638
%
Out
CV
SMP235 (L)1Glu29.310.5%0.0
SMP147 (L)1GABA18.76.7%0.0
FB7E (L)3Glu176.1%0.4
LoVP82 (L)2ACh103.6%0.5
SMP057 (L)2Glu9.73.5%0.7
FB2G_b (L)3Glu9.73.5%0.6
SMP034 (L)2Glu7.72.7%0.3
SMP338 (L)2Glu7.32.6%0.1
FB6C_b (L)3Glu7.32.6%0.3
FB8I (L)3Glu72.5%0.6
FB7L (L)1Glu62.1%0.0
FB1C (L)1DA5.72.0%0.0
SIP004 (L)1ACh4.71.7%0.0
CB1897 (L)4ACh41.4%0.7
FB6B (L)1Glu3.71.3%0.0
FB7I (L)2Glu3.71.3%0.5
FB6U (L)2Glu3.31.2%0.0
SMP046 (L)1Glu31.1%0.0
CB4125 (L)1unc31.1%0.0
SMP119 (R)1Glu31.1%0.0
SMP125 (R)1Glu31.1%0.0
SMP189 (L)1ACh2.71.0%0.0
SMP427 (L)1ACh2.71.0%0.0
ATL024 (L)1Glu2.30.8%0.0
FB6V (L)1Glu2.30.8%0.0
FB5G_a (L)2Glu2.30.8%0.4
CB3076 (L)1ACh2.30.8%0.0
SMP201 (L)1Glu2.30.8%0.0
CB2295 (L)2ACh2.30.8%0.1
IB042 (L)1Glu2.30.8%0.0
SMP408_d (L)3ACh20.7%0.7
MeVC27 (L)2unc20.7%0.3
ATL004 (L)1Glu20.7%0.0
SMP186 (L)1ACh20.7%0.0
CB2539 (L)3GABA20.7%0.7
SMP304 (L)1GABA20.7%0.0
SLP075 (L)1Glu1.70.6%0.0
SMP234 (L)1Glu1.70.6%0.0
CL303 (L)1ACh1.70.6%0.0
DNp104 (L)1ACh1.70.6%0.0
CB1547 (L)1ACh1.70.6%0.0
IB109 (L)1Glu1.70.6%0.0
CB2638 (L)3ACh1.70.6%0.6
CB2814 (L)3Glu1.70.6%0.3
LHPV6q1 (L)1unc1.30.5%0.0
SMP459 (L)1ACh1.30.5%0.0
CL086_b (L)2ACh1.30.5%0.5
SMP044 (L)1Glu1.30.5%0.0
SMP743 (L)2ACh1.30.5%0.5
CB4134 (L)3Glu1.30.5%0.4
CB4137 (L)3Glu1.30.5%0.4
SMP181 (L)1unc1.30.5%0.0
SIP029 (L)1ACh1.30.5%0.0
CB1617 (L)2Glu1.30.5%0.0
CL014 (L)2Glu1.30.5%0.0
CL042 (L)1Glu10.4%0.0
IB109 (R)1Glu10.4%0.0
SMP135 (R)1Glu10.4%0.0
FB5G_c (L)1Glu10.4%0.0
SMP128 (R)1Glu10.4%0.0
FB8F_b (L)1Glu10.4%0.0
SMP186 (R)1ACh10.4%0.0
SMP181 (R)1unc10.4%0.0
FS3_d (L)3ACh10.4%0.0
SMP451 (L)1Glu0.70.2%0.0
FB6H (L)1unc0.70.2%0.0
SMP595 (L)1Glu0.70.2%0.0
CB3080 (L)1Glu0.70.2%0.0
CB4158 (L)1ACh0.70.2%0.0
SMP535 (L)1Glu0.70.2%0.0
SLP021 (L)1Glu0.70.2%0.0
SMP299 (L)1GABA0.70.2%0.0
SMP368 (L)1ACh0.70.2%0.0
CL362 (L)1ACh0.70.2%0.0
SMP166 (L)1GABA0.70.2%0.0
CL196 (L)1Glu0.70.2%0.0
SMP082 (L)1Glu0.70.2%0.0
CL025 (L)1Glu0.70.2%0.0
SMP184 (L)1ACh0.70.2%0.0
SMP527 (L)1ACh0.70.2%0.0
SMP153_b (L)1ACh0.70.2%0.0
SLP074 (L)1ACh0.70.2%0.0
FB8G (L)2Glu0.70.2%0.0
FB8F_a (L)1Glu0.70.2%0.0
CB0943 (L)2ACh0.70.2%0.0
LHPV5e2 (R)1ACh0.70.2%0.0
CB1009 (L)1unc0.70.2%0.0
SMP386 (L)1ACh0.70.2%0.0
SMP387 (L)1ACh0.70.2%0.0
CB3541 (L)2ACh0.70.2%0.0
DNES1 (L)2unc0.70.2%0.0
PLP128 (R)1ACh0.30.1%0.0
CB3015 (L)1ACh0.30.1%0.0
SMP416 (L)1ACh0.30.1%0.0
CB4023 (L)1ACh0.30.1%0.0
CB2300 (L)1ACh0.30.1%0.0
PAM10 (L)1DA0.30.1%0.0
SMP214 (L)1Glu0.30.1%0.0
SLP412_b (L)1Glu0.30.1%0.0
CB1532 (L)1ACh0.30.1%0.0
LHPV6f5 (L)1ACh0.30.1%0.0
SMP096 (L)1Glu0.30.1%0.0
SMP412 (L)1ACh0.30.1%0.0
SMP257 (L)1ACh0.30.1%0.0
SMP126 (R)1Glu0.30.1%0.0
CB1858 (L)1unc0.30.1%0.0
SMP566 (L)1ACh0.30.1%0.0
SMP192 (L)1ACh0.30.1%0.0
SLP397 (L)1ACh0.30.1%0.0
ATL018 (L)1ACh0.30.1%0.0
CL008 (L)1Glu0.30.1%0.0
FB5AA (L)1Glu0.30.1%0.0
CL317 (L)1Glu0.30.1%0.0
SMP188 (L)1ACh0.30.1%0.0
CB0429 (L)1ACh0.30.1%0.0
SLP447 (L)1Glu0.30.1%0.0
DGI (L)1Glu0.30.1%0.0
SMP495_b (L)1Glu0.30.1%0.0
SMP368 (R)1ACh0.30.1%0.0
SMP061 (L)1Glu0.30.1%0.0
CB1529 (L)1ACh0.30.1%0.0
SLP260 (L)1Glu0.30.1%0.0
CB4022 (L)1ACh0.30.1%0.0
SMP408_c (L)1ACh0.30.1%0.0
SLP387 (L)1Glu0.30.1%0.0
CB3376 (L)1ACh0.30.1%0.0
SLP405 (L)1ACh0.30.1%0.0
CL152 (L)1Glu0.30.1%0.0
SMP306 (L)1GABA0.30.1%0.0
CL280 (L)1ACh0.30.1%0.0
SMP373 (L)1ACh0.30.1%0.0
PLP064_b (L)1ACh0.30.1%0.0
CB1685 (L)1Glu0.30.1%0.0
FB6F (L)1Glu0.30.1%0.0
SMP272 (L)1ACh0.30.1%0.0
ExR3 (L)15-HT0.30.1%0.0
LoVP64 (L)1Glu0.30.1%0.0
SMP184 (R)1ACh0.30.1%0.0
CRE075 (L)1Glu0.30.1%0.0
CB1884 (L)1Glu0.30.1%0.0
SLP435 (L)1Glu0.30.1%0.0
SMP542 (L)1Glu0.30.1%0.0
SMP702m (L)1Glu0.30.1%0.0
SMP598 (L)1Glu0.30.1%0.0
CL179 (L)1Glu0.30.1%0.0
CB1548 (L)1ACh0.30.1%0.0
FS3_d (R)1ACh0.30.1%0.0
SMP430 (L)1ACh0.30.1%0.0
CB1733 (L)1Glu0.30.1%0.0
CB1945 (L)1Glu0.30.1%0.0
LHPD4d2_b (L)1Glu0.30.1%0.0
SMP136 (R)1Glu0.30.1%0.0
CB2572 (L)1ACh0.30.1%0.0
SLP171 (L)1Glu0.30.1%0.0
PLP122_a (L)1ACh0.30.1%0.0
SMP445 (L)1Glu0.30.1%0.0
SMP565 (L)1ACh0.30.1%0.0
SMP743 (R)1ACh0.30.1%0.0
SLP382 (L)1Glu0.30.1%0.0
CB3614 (R)1ACh0.30.1%0.0
SLP207 (L)1GABA0.30.1%0.0
LHPV1c2 (L)1ACh0.30.1%0.0
LoVP45 (L)1Glu0.30.1%0.0
OA-VUMa3 (M)1OA0.30.1%0.0
SMP001 (L)1unc0.30.1%0.0