Male CNS – Cell Type Explorer

CB2517(L)

3
Total Neurons
Right: 2 | Left: 1
log ratio : -1.00
368
Total Synapses
Post: 222 | Pre: 146
log ratio : -0.60
368
Mean Synapses
Post: 222 | Pre: 146
log ratio : -0.60
Glu(71.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SLP(L)14665.8%-0.768658.9%
SMP(L)5123.0%-0.423826.0%
SIP(L)188.1%0.152013.7%
CentralBrain-unspecified73.2%-1.8121.4%

Connectivity

Inputs

upstream
partner
#NTconns
CB2517
%
In
CV
FS4A (R)10ACh9648.0%0.6
CB3050 (L)2ACh2110.5%0.8
CB1617 (L)5Glu126.0%0.6
CB1178 (L)2Glu63.0%0.7
CB1884 (L)2Glu63.0%0.3
CB3081 (L)2ACh52.5%0.6
LHPV6f3_b (L)2ACh42.0%0.5
FS4B (R)3ACh42.0%0.4
M_vPNml53 (L)1GABA31.5%0.0
SLP414 (L)3Glu31.5%0.0
SIP015 (L)1Glu21.0%0.0
FS4C (R)1ACh21.0%0.0
CB2992 (L)1Glu21.0%0.0
M_vPNml54 (L)1GABA21.0%0.0
SLP315 (L)1Glu21.0%0.0
SMP167 (L)1unc21.0%0.0
CB2467 (L)1ACh21.0%0.0
LHAV6i2_b (L)1ACh21.0%0.0
SLP269 (L)1ACh21.0%0.0
DNpe053 (L)1ACh21.0%0.0
SLP359 (L)2ACh21.0%0.0
SLP271 (L)1ACh10.5%0.0
FB7K (L)1Glu10.5%0.0
FS3_d (R)1ACh10.5%0.0
CB4129 (L)1Glu10.5%0.0
CB4138 (L)1Glu10.5%0.0
CB4107 (L)1ACh10.5%0.0
SMP497 (L)1Glu10.5%0.0
SLP268 (L)1Glu10.5%0.0
CB2910 (L)1ACh10.5%0.0
CB1387 (L)1ACh10.5%0.0
PRW009 (L)1ACh10.5%0.0
DNpe053 (R)1ACh10.5%0.0
SMP184 (L)1ACh10.5%0.0
LHAV3a1_c (L)1ACh10.5%0.0
SMP505 (R)1ACh10.5%0.0
SMP181 (L)1unc10.5%0.0
PPL203 (L)1unc10.5%0.0
CSD (R)15-HT10.5%0.0

Outputs

downstream
partner
#NTconns
CB2517
%
Out
CV
FS4A (R)21ACh8425.8%0.7
CB3050 (L)4ACh226.8%0.9
FB1E_b (L)1Glu185.5%0.0
CB4157 (L)3Glu164.9%0.8
FB1D (L)1Glu154.6%0.0
FB7B (L)1unc123.7%0.0
CB3541 (L)2ACh123.7%0.2
CB4134 (L)2Glu103.1%0.2
CB1406 (L)1Glu82.5%0.0
SLP359 (L)2ACh82.5%0.2
CB2814 (L)3Glu82.5%0.4
SMP338 (L)2Glu61.8%0.3
SMP505 (R)1ACh51.5%0.0
LHPV6f3_b (L)2ACh51.5%0.6
CB1617 (L)4Glu51.5%0.3
CB4133 (L)3Glu51.5%0.3
SMP166 (L)1GABA41.2%0.0
FB1B (L)1Glu41.2%0.0
SMP125 (R)1Glu30.9%0.0
FB7C (L)1Glu30.9%0.0
CB2535 (L)1ACh30.9%0.0
FB7L (L)1Glu30.9%0.0
SLP368 (R)1ACh30.9%0.0
SMP505 (L)1ACh30.9%0.0
LoVP64 (L)1Glu30.9%0.0
SLP414 (L)2Glu30.9%0.3
FS4B (R)1ACh20.6%0.0
SMP497 (L)1Glu20.6%0.0
CB4022 (L)1ACh20.6%0.0
FB1E_a (L)1Glu20.6%0.0
SAF (L)1Glu20.6%0.0
LHPV6f3_b (R)1ACh20.6%0.0
SMP126 (R)1Glu20.6%0.0
SLP199 (L)1Glu20.6%0.0
CB1685 (L)1Glu20.6%0.0
LHPV6i2_a (L)1ACh20.6%0.0
FB6F (L)1Glu20.6%0.0
SMP001 (L)1unc20.6%0.0
FS4C (R)2ACh20.6%0.0
SMP167 (L)2unc20.6%0.0
SMP186 (L)1ACh10.3%0.0
SMP387 (L)1ACh10.3%0.0
PPL107 (L)1DA10.3%0.0
SMP337 (L)1Glu10.3%0.0
CB4107 (L)1ACh10.3%0.0
FB8A (L)1Glu10.3%0.0
FB9C (L)1Glu10.3%0.0
CB3069 (L)1ACh10.3%0.0
CB1281 (L)1Glu10.3%0.0
FB8F_b (L)1Glu10.3%0.0
FB9B_b (L)1Glu10.3%0.0
CB4129 (L)1Glu10.3%0.0
FB8D (L)1Glu10.3%0.0
FS3_d (R)1ACh10.3%0.0
SA3 (L)1Glu10.3%0.0
SLP240_a (L)1ACh10.3%0.0
SMP191 (L)1ACh10.3%0.0
SMP297 (L)1GABA10.3%0.0
FB8G (L)1Glu10.3%0.0
FB3E (L)1GABA10.3%0.0
SLP211 (L)1ACh10.3%0.0
DN1pB (L)1Glu10.3%0.0
SLP397 (L)1ACh10.3%0.0
BiT (R)1ACh10.3%0.0
BiT (L)1ACh10.3%0.0
SMP034 (L)1Glu10.3%0.0