Male CNS – Cell Type Explorer

CB2500(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,473
Total Synapses
Post: 1,269 | Pre: 204
log ratio : -2.64
1,473
Mean Synapses
Post: 1,269 | Pre: 204
log ratio : -2.64
Glu(81.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (12 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SCL(R)74959.0%-3.118742.6%
ICL(R)13810.9%-2.94188.8%
SMP(R)1007.9%-1.792914.2%
SLP(R)1159.1%-3.39115.4%
SMP(L)413.2%-0.902210.8%
SIP(R)241.9%-0.88136.4%
PED(R)332.6%-4.0421.0%
CentralBrain-unspecified221.7%-1.14104.9%
ICL(L)181.4%-2.5831.5%
PLP(R)181.4%-2.5831.5%
SCL(L)60.5%-0.2652.5%
PVLP(R)50.4%-2.3210.5%

Connectivity

Inputs

upstream
partner
#NTconns
CB2500
%
In
CV
AVLP045 (R)5ACh534.4%0.5
CL024_a (R)3Glu453.7%0.4
CL063 (R)1GABA413.4%0.0
LHAD2c3 (R)3ACh413.4%0.2
CB4116 (R)3ACh262.2%0.6
PLP064_a (R)4ACh262.2%0.3
SLP131 (R)1ACh252.1%0.0
CB4116 (L)4ACh252.1%1.0
CL125 (R)2Glu242.0%0.2
LHAD2c1 (R)2ACh231.9%0.7
CL234 (R)2Glu201.7%0.1
CB3869 (R)1ACh191.6%0.0
CB3908 (R)3ACh191.6%0.7
SMP488 (L)1ACh181.5%0.0
SMP380 (R)4ACh171.4%0.2
AN05B097 (R)1ACh161.3%0.0
SLP228 (R)2ACh161.3%0.2
CB1072 (L)4ACh151.2%1.0
GNG121 (L)1GABA121.0%0.0
SMP501 (R)2Glu121.0%0.3
CB4073 (L)3ACh121.0%0.6
aIPg9 (R)1ACh110.9%0.0
CL257 (R)1ACh110.9%0.0
CB3530 (R)2ACh110.9%0.6
PS146 (R)2Glu100.8%0.2
CL113 (R)2ACh100.8%0.0
SMP048 (L)1ACh90.7%0.0
CB1302 (R)1ACh90.7%0.0
SLP379 (R)1Glu90.7%0.0
CL069 (R)1ACh90.7%0.0
CB1190 (L)2ACh90.7%0.1
SLP223 (R)2ACh90.7%0.1
CB1190 (R)2ACh90.7%0.1
CL345 (L)1Glu80.7%0.0
CL130 (R)1ACh80.7%0.0
aIPg_m2 (R)1ACh80.7%0.0
AVLP047 (R)2ACh80.7%0.5
PS149 (R)1Glu70.6%0.0
CB3907 (R)1ACh70.6%0.0
SLP442 (R)1ACh70.6%0.0
AN05B103 (R)1ACh70.6%0.0
CL036 (R)1Glu70.6%0.0
AVLP089 (R)2Glu70.6%0.1
PLP064_b (R)2ACh70.6%0.1
AN05B097 (L)1ACh60.5%0.0
SMP048 (R)1ACh60.5%0.0
SMP488 (R)1ACh60.5%0.0
SLP189 (R)1Glu60.5%0.0
SMP160 (L)1Glu60.5%0.0
CL063 (L)1GABA60.5%0.0
CB3530 (L)2ACh60.5%0.7
AVLP036 (R)2ACh60.5%0.7
CB1189 (R)2ACh60.5%0.3
AVLP038 (R)3ACh60.5%0.7
CB1072 (R)3ACh60.5%0.4
CL024_d (R)1Glu50.4%0.0
SMP491 (L)1ACh50.4%0.0
aMe12 (R)1ACh50.4%0.0
AVLP433_b (R)1ACh50.4%0.0
AVLP434_a (L)1ACh50.4%0.0
LoVP101 (R)1ACh50.4%0.0
VES012 (R)1ACh50.4%0.0
SMP593 (R)1GABA50.4%0.0
AstA1 (L)1GABA50.4%0.0
CB1017 (R)2ACh50.4%0.2
SLP227 (R)3ACh50.4%0.6
PLP001 (L)1GABA40.3%0.0
SMP593 (L)1GABA40.3%0.0
AVLP433_b (L)1ACh40.3%0.0
SMP010 (R)1Glu40.3%0.0
SMP477 (R)1ACh40.3%0.0
SMP160 (R)1Glu40.3%0.0
LC44 (R)1ACh40.3%0.0
DNpe053 (R)1ACh40.3%0.0
SMP489 (L)1ACh40.3%0.0
AVLP033 (R)1ACh40.3%0.0
CL064 (R)1GABA40.3%0.0
GNG579 (R)1GABA40.3%0.0
GNG103 (R)1GABA40.3%0.0
OA-VPM4 (L)1OA40.3%0.0
CB1794 (R)2Glu40.3%0.5
CL235 (L)2Glu40.3%0.5
AVLP234 (L)2ACh40.3%0.0
CB4073 (R)2ACh40.3%0.0
CB2967 (R)3Glu40.3%0.4
SLP285 (R)1Glu30.2%0.0
CRE095 (R)1ACh30.2%0.0
SIP132m (L)1ACh30.2%0.0
PS146 (L)1Glu30.2%0.0
LHPD5e1 (R)1ACh30.2%0.0
CL078_c (L)1ACh30.2%0.0
CB2625 (R)1ACh30.2%0.0
CL290 (R)1ACh30.2%0.0
SMP312 (R)1ACh30.2%0.0
SMP380 (L)1ACh30.2%0.0
LHAV1b3 (R)1ACh30.2%0.0
CL023 (L)1ACh30.2%0.0
CL078_b (R)1ACh30.2%0.0
CL234 (L)1Glu30.2%0.0
AVLP218_b (L)1ACh30.2%0.0
CL368 (R)1Glu30.2%0.0
GNG579 (L)1GABA30.2%0.0
AVLP035 (R)1ACh30.2%0.0
AVLP033 (L)1ACh30.2%0.0
PPM1201 (R)1DA30.2%0.0
GNG121 (R)1GABA30.2%0.0
SAD082 (L)1ACh30.2%0.0
AVLP572 (R)1ACh30.2%0.0
AstA1 (R)1GABA30.2%0.0
CL185 (R)2Glu30.2%0.3
CL235 (R)2Glu30.2%0.3
SMP055 (L)2Glu30.2%0.3
PVLP118 (R)2ACh30.2%0.3
CB2816 (R)1Glu20.2%0.0
mALB5 (L)1GABA20.2%0.0
CB1017 (L)1ACh20.2%0.0
AVLP063 (L)1Glu20.2%0.0
CB2182 (R)1Glu20.2%0.0
AVLP445 (R)1ACh20.2%0.0
SMP506 (R)1ACh20.2%0.0
AVLP433_a (L)1ACh20.2%0.0
SMP719m (L)1Glu20.2%0.0
aIPg9 (L)1ACh20.2%0.0
CB1396 (R)1Glu20.2%0.0
AVLP279 (R)1ACh20.2%0.0
CB2152 (R)1Glu20.2%0.0
CB2433 (L)1ACh20.2%0.0
CRE095 (L)1ACh20.2%0.0
CL165 (R)1ACh20.2%0.0
SMP510 (L)1ACh20.2%0.0
CL147 (R)1Glu20.2%0.0
CL166 (R)1ACh20.2%0.0
AVLP049 (L)1ACh20.2%0.0
SLP189_b (R)1Glu20.2%0.0
CB1005 (L)1Glu20.2%0.0
CB0084 (R)1Glu20.2%0.0
SMP452 (L)1Glu20.2%0.0
AVLP022 (L)1Glu20.2%0.0
CB3414 (R)1ACh20.2%0.0
CL292 (R)1ACh20.2%0.0
CL104 (R)1ACh20.2%0.0
AVLP486 (R)1GABA20.2%0.0
CL024_b (R)1Glu20.2%0.0
CB1403 (R)1ACh20.2%0.0
CL101 (R)1ACh20.2%0.0
SLP229 (R)1ACh20.2%0.0
CB3906 (R)1ACh20.2%0.0
CL100 (R)1ACh20.2%0.0
CRE088 (R)1ACh20.2%0.0
PLP239 (R)1ACh20.2%0.0
CB2196 (R)1Glu20.2%0.0
AVLP244 (R)1ACh20.2%0.0
PLP095 (R)1ACh20.2%0.0
CB2659 (R)1ACh20.2%0.0
AVLP595 (R)1ACh20.2%0.0
CL032 (R)1Glu20.2%0.0
SMP010 (L)1Glu20.2%0.0
LoVP97 (R)1ACh20.2%0.0
pC1x_d (R)1ACh20.2%0.0
CB2257 (L)1ACh20.2%0.0
pC1x_d (L)1ACh20.2%0.0
aMe15 (L)1ACh20.2%0.0
SMP036 (R)1Glu20.2%0.0
CB0992 (L)1ACh20.2%0.0
IB094 (L)1Glu20.2%0.0
CL066 (R)1GABA20.2%0.0
SLP130 (R)1ACh20.2%0.0
CL257 (L)1ACh20.2%0.0
CL065 (R)1ACh20.2%0.0
AVLP590 (R)1Glu20.2%0.0
CL092 (R)1ACh20.2%0.0
AVLP531 (R)1GABA20.2%0.0
MBON20 (R)1GABA20.2%0.0
AVLP280 (R)1ACh20.2%0.0
CL152 (R)2Glu20.2%0.0
OA-VUMa3 (M)2OA20.2%0.0
DNp32 (L)1unc10.1%0.0
CL359 (R)1ACh10.1%0.0
SMP155 (R)1GABA10.1%0.0
CL094 (L)1ACh10.1%0.0
SMP371_a (R)1Glu10.1%0.0
SMP323 (L)1ACh10.1%0.0
mALB5 (R)1GABA10.1%0.0
DNp32 (R)1unc10.1%0.0
SMP072 (R)1Glu10.1%0.0
SMP145 (R)1unc10.1%0.0
SMP594 (R)1GABA10.1%0.0
CL191_b (R)1Glu10.1%0.0
CL191_a (R)1Glu10.1%0.0
SMP717m (R)1ACh10.1%0.0
AVLP595 (L)1ACh10.1%0.0
AVLP733m (L)1ACh10.1%0.0
CL196 (L)1Glu10.1%0.0
SMP077 (R)1GABA10.1%0.0
CB3135 (L)1Glu10.1%0.0
SMP703m (R)1Glu10.1%0.0
LHPV5c3 (R)1ACh10.1%0.0
SMP106 (R)1Glu10.1%0.0
CB2027 (L)1Glu10.1%0.0
CB2500 (L)1Glu10.1%0.0
CL191_a (L)1Glu10.1%0.0
SMP452 (R)1Glu10.1%0.0
CL189 (R)1Glu10.1%0.0
PS007 (R)1Glu10.1%0.0
SMP342 (R)1Glu10.1%0.0
CB2846 (L)1ACh10.1%0.0
AVLP069_c (L)1Glu10.1%0.0
IB038 (R)1Glu10.1%0.0
AVLP483 (R)1unc10.1%0.0
SMP162 (L)1Glu10.1%0.0
AVLP049 (R)1ACh10.1%0.0
CL272_a2 (R)1ACh10.1%0.0
SMP378 (R)1ACh10.1%0.0
SLP189_a (R)1Glu10.1%0.0
AVLP271 (R)1ACh10.1%0.0
CL004 (R)1Glu10.1%0.0
IB017 (R)1ACh10.1%0.0
CB2006 (R)1ACh10.1%0.0
SMP529 (R)1ACh10.1%0.0
CB1795 (R)1ACh10.1%0.0
AVLP037 (R)1ACh10.1%0.0
CL253 (R)1GABA10.1%0.0
CL073 (R)1ACh10.1%0.0
AVLP182 (R)1ACh10.1%0.0
CL294 (R)1ACh10.1%0.0
AVLP093 (R)1GABA10.1%0.0
SMP143 (L)1unc10.1%0.0
CB3576 (R)1ACh10.1%0.0
LoVP43 (R)1ACh10.1%0.0
AVLP065 (R)1Glu10.1%0.0
SMP490 (L)1ACh10.1%0.0
CL099 (R)1ACh10.1%0.0
SIP024 (R)1ACh10.1%0.0
PLP053 (R)1ACh10.1%0.0
P1_6a (R)1ACh10.1%0.0
CL356 (R)1ACh10.1%0.0
SMP339 (R)1ACh10.1%0.0
PLP052 (R)1ACh10.1%0.0
AVLP046 (R)1ACh10.1%0.0
CL008 (R)1Glu10.1%0.0
AVLP390 (R)1ACh10.1%0.0
aIPg1 (R)1ACh10.1%0.0
AVLP218_a (L)1ACh10.1%0.0
CL010 (R)1Glu10.1%0.0
SLP456 (R)1ACh10.1%0.0
LoVP106 (R)1ACh10.1%0.0
AVLP474 (R)1GABA10.1%0.0
AVLP036 (L)1ACh10.1%0.0
SLP278 (R)1ACh10.1%0.0
AVLP031 (R)1GABA10.1%0.0
SLP059 (R)1GABA10.1%0.0
PS001 (R)1GABA10.1%0.0
AVLP035 (L)1ACh10.1%0.0
CL159 (R)1ACh10.1%0.0
MeVC20 (R)1Glu10.1%0.0
SLP304 (R)1unc10.1%0.0
AVLP030 (R)1GABA10.1%0.0
CL115 (R)1GABA10.1%0.0
SMP109 (R)1ACh10.1%0.0
aIPg_m4 (R)1ACh10.1%0.0
AVLP029 (R)1GABA10.1%0.0
PS111 (L)1Glu10.1%0.0
IB115 (R)1ACh10.1%0.0
CL112 (R)1ACh10.1%0.0
SLP438 (R)1unc10.1%0.0
CL365 (L)1unc10.1%0.0
PLP246 (R)1ACh10.1%0.0
PS001 (L)1GABA10.1%0.0
AVLP531 (L)1GABA10.1%0.0
AVLP433_a (R)1ACh10.1%0.0
mALD1 (L)1GABA10.1%0.0
PPL202 (R)1DA10.1%0.0
DNpe053 (L)1ACh10.1%0.0
PLP124 (R)1ACh10.1%0.0
LoVCLo3 (R)1OA10.1%0.0

Outputs

downstream
partner
#NTconns
CB2500
%
Out
CV
CL099 (R)5ACh235.3%0.7
CB4073 (R)5ACh184.2%0.5
CL235 (R)3Glu143.3%0.4
SMP155 (R)2GABA133.0%0.5
CL235 (L)3Glu133.0%0.8
LHAD2c1 (R)2ACh102.3%0.2
CRE038 (L)1Glu92.1%0.0
CL065 (R)1ACh92.1%0.0
SMP054 (R)1GABA81.9%0.0
PS002 (R)3GABA71.6%0.5
SLP003 (R)1GABA61.4%0.0
SMP160 (R)2Glu61.4%0.3
SMP155 (L)1GABA51.2%0.0
SMP472 (R)1ACh51.2%0.0
DNp101 (R)1ACh51.2%0.0
AVLP016 (R)1Glu51.2%0.0
CB4073 (L)2ACh51.2%0.2
CB2816 (R)2Glu40.9%0.5
CB1396 (R)1Glu30.7%0.0
CL042 (R)1Glu30.7%0.0
SLP442 (L)1ACh30.7%0.0
SMP579 (R)1unc30.7%0.0
SMP159 (R)1Glu30.7%0.0
AVLP015 (R)1Glu30.7%0.0
CL029_a (R)1Glu30.7%0.0
SMP160 (L)1Glu30.7%0.0
AVLP562 (R)1ACh30.7%0.0
PVLP115 (R)1ACh30.7%0.0
CL159 (L)1ACh30.7%0.0
CL111 (R)1ACh30.7%0.0
AVLP339 (L)1ACh30.7%0.0
CL286 (R)1ACh30.7%0.0
AVLP572 (R)1ACh30.7%0.0
CL038 (R)2Glu30.7%0.3
SMP452 (R)2Glu30.7%0.3
SMP315 (R)2ACh30.7%0.3
CL024_a (R)3Glu30.7%0.0
SMP085 (R)1Glu20.5%0.0
CL165 (R)1ACh20.5%0.0
SMP394 (R)1ACh20.5%0.0
OA-ASM3 (R)1unc20.5%0.0
AN05B097 (L)1ACh20.5%0.0
CL339 (R)1ACh20.5%0.0
SMP506 (R)1ACh20.5%0.0
SMP717m (R)1ACh20.5%0.0
SMP055 (R)1Glu20.5%0.0
PS146 (L)1Glu20.5%0.0
DNp42 (R)1ACh20.5%0.0
SMP081 (R)1Glu20.5%0.0
CB1833 (R)1Glu20.5%0.0
CB2074 (R)1Glu20.5%0.0
CB3574 (R)1Glu20.5%0.0
SMP381_a (R)1ACh20.5%0.0
SMP719m (R)1Glu20.5%0.0
CL165 (L)1ACh20.5%0.0
SMP162 (R)1Glu20.5%0.0
IB017 (R)1ACh20.5%0.0
SMP214 (R)1Glu20.5%0.0
AVLP442 (R)1ACh20.5%0.0
aIPg9 (R)1ACh20.5%0.0
PRW012 (R)1ACh20.5%0.0
AVLP039 (R)1ACh20.5%0.0
SLP442 (R)1ACh20.5%0.0
CL368 (R)1Glu20.5%0.0
CL032 (R)1Glu20.5%0.0
SMP596 (R)1ACh20.5%0.0
PLP144 (R)1GABA20.5%0.0
PS002 (L)1GABA20.5%0.0
SLP060 (R)1GABA20.5%0.0
SMP041 (R)1Glu20.5%0.0
AVLP039 (L)1ACh20.5%0.0
CL022_b (R)1ACh20.5%0.0
CL036 (R)1Glu20.5%0.0
AVLP029 (R)1GABA20.5%0.0
CL069 (L)1ACh20.5%0.0
LoVC19 (R)1ACh20.5%0.0
CB0429 (R)1ACh20.5%0.0
LoVC1 (L)1Glu20.5%0.0
CL361 (R)1ACh20.5%0.0
SIP136m (L)1ACh20.5%0.0
PLP124 (R)1ACh20.5%0.0
DNp27 (R)1ACh20.5%0.0
CB2401 (R)2Glu20.5%0.0
SMP501 (R)2Glu20.5%0.0
PS007 (R)2Glu20.5%0.0
CL269 (R)2ACh20.5%0.0
PLP052 (R)2ACh20.5%0.0
SMP021 (L)1ACh10.2%0.0
PS108 (R)1Glu10.2%0.0
CL359 (R)1ACh10.2%0.0
AVLP022 (R)1Glu10.2%0.0
SMP451 (L)1Glu10.2%0.0
PLP246 (L)1ACh10.2%0.0
AN10B005 (L)1ACh10.2%0.0
CL063 (R)1GABA10.2%0.0
SMP527 (R)1ACh10.2%0.0
SMP490 (R)1ACh10.2%0.0
SMP482 (R)1ACh10.2%0.0
CL303 (R)1ACh10.2%0.0
SMP322 (R)1ACh10.2%0.0
DNp32 (R)1unc10.2%0.0
SMP072 (R)1Glu10.2%0.0
LAL134 (R)1GABA10.2%0.0
SMP048 (R)1ACh10.2%0.0
CB1050 (R)1ACh10.2%0.0
aIPg_m1 (L)1ACh10.2%0.0
SMP010 (R)1Glu10.2%0.0
CL160 (R)1ACh10.2%0.0
CB2458 (R)1ACh10.2%0.0
SMP469 (R)1ACh10.2%0.0
SMP068 (R)1Glu10.2%0.0
SMP488 (R)1ACh10.2%0.0
DNp44 (R)1ACh10.2%0.0
SMP077 (R)1GABA10.2%0.0
SMP449 (R)1Glu10.2%0.0
CB3120 (R)1ACh10.2%0.0
CL190 (R)1Glu10.2%0.0
SMP131 (R)1Glu10.2%0.0
PS005_e (L)1Glu10.2%0.0
CL186 (R)1Glu10.2%0.0
CL189 (R)1Glu10.2%0.0
CB2931 (R)1Glu10.2%0.0
CL182 (R)1Glu10.2%0.0
CL177 (L)1Glu10.2%0.0
PLP134 (R)1ACh10.2%0.0
CL292 (L)1ACh10.2%0.0
CL147 (R)1Glu10.2%0.0
SMP476 (R)1ACh10.2%0.0
SMP488 (L)1ACh10.2%0.0
LHPD5d1 (R)1ACh10.2%0.0
CL185 (R)1Glu10.2%0.0
CRE094 (L)1ACh10.2%0.0
CL166 (R)1ACh10.2%0.0
SMP021 (R)1ACh10.2%0.0
SMP380 (R)1ACh10.2%0.0
CB1808 (R)1Glu10.2%0.0
SMP476 (L)1ACh10.2%0.0
IB038 (R)1Glu10.2%0.0
SMP312 (L)1ACh10.2%0.0
CB2967 (R)1Glu10.2%0.0
CL184 (R)1Glu10.2%0.0
AVLP045 (R)1ACh10.2%0.0
CRE090 (L)1ACh10.2%0.0
SMP069 (L)1Glu10.2%0.0
SMP066 (R)1Glu10.2%0.0
SMP424 (R)1Glu10.2%0.0
WED012 (R)1GABA10.2%0.0
LHAD2c3 (R)1ACh10.2%0.0
SMP507 (R)1ACh10.2%0.0
AVLP180 (R)1ACh10.2%0.0
SMP583 (R)1Glu10.2%0.0
LHAV8a1 (R)1Glu10.2%0.0
AVLP113 (R)1ACh10.2%0.0
SMP066 (L)1Glu10.2%0.0
CL077 (R)1ACh10.2%0.0
CL266_a2 (R)1ACh10.2%0.0
aIPg4 (R)1ACh10.2%0.0
CL080 (R)1ACh10.2%0.0
SMP546 (R)1ACh10.2%0.0
CRZ01 (R)1unc10.2%0.0
CB2659 (R)1ACh10.2%0.0
SMP199 (R)1ACh10.2%0.0
LNd_b (R)1ACh10.2%0.0
aIPg_m2 (R)1ACh10.2%0.0
SMP710m (R)1ACh10.2%0.0
SMP010 (L)1Glu10.2%0.0
SLP379 (R)1Glu10.2%0.0
SMP489 (R)1ACh10.2%0.0
CL022_c (R)1ACh10.2%0.0
SMP541 (L)1Glu10.2%0.0
CL027 (R)1GABA10.2%0.0
DNa08 (L)1ACh10.2%0.0
CL069 (R)1ACh10.2%0.0
SLP059 (R)1GABA10.2%0.0
CL287 (R)1GABA10.2%0.0
CL159 (R)1ACh10.2%0.0
MeVC20 (R)1Glu10.2%0.0
AVLP030 (R)1GABA10.2%0.0
GNG579 (R)1GABA10.2%0.0
SLP130 (R)1ACh10.2%0.0
CL066 (R)1GABA10.2%0.0
AN10B005 (R)1ACh10.2%0.0
DNp104 (L)1ACh10.2%0.0
SAD082 (L)1ACh10.2%0.0
LoVC5 (R)1GABA10.2%0.0
SMP543 (L)1GABA10.2%0.0
CL251 (R)1ACh10.2%0.0
AVLP215 (R)1GABA10.2%0.0
CB0429 (L)1ACh10.2%0.0
CL286 (L)1ACh10.2%0.0
DNp42 (L)1ACh10.2%0.0
DNp103 (R)1ACh10.2%0.0
SIP136m (R)1ACh10.2%0.0
IB008 (L)1GABA10.2%0.0
AstA1 (L)1GABA10.2%0.0