Male CNS – Cell Type Explorer

CB2200(R)

3
Total Neurons
Right: 1 | Left: 2
log ratio : 1.00
498
Total Synapses
Post: 306 | Pre: 192
log ratio : -0.67
498
Mean Synapses
Post: 306 | Pre: 192
log ratio : -0.67
ACh(93.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
IB10133.0%0.4413771.4%
SCL(R)10032.7%-3.18115.7%
ICL(R)5819.0%-1.86168.3%
ATL(R)123.9%1.062513.0%
PLP(R)185.9%-2.5831.6%
CentralBrain-unspecified92.9%-inf00.0%
SLP(R)72.3%-inf00.0%
SPS(R)10.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB2200
%
In
CV
CL353 (L)4Glu176.1%0.5
LoVP59 (R)1ACh145.1%0.0
LoVP26 (R)1ACh134.7%0.0
CL353 (R)3Glu124.3%0.5
CL287 (R)1GABA114.0%0.0
SLP076 (R)2Glu114.0%0.6
AVLP046 (R)2ACh114.0%0.3
LoVP24 (L)3ACh114.0%0.3
LoVP23 (R)1ACh82.9%0.0
CL288 (R)1GABA82.9%0.0
LoVP24 (R)3ACh82.9%0.9
CL090_c (R)3ACh82.9%0.2
CB2896 (R)1ACh72.5%0.0
OA-VUMa3 (M)2OA72.5%0.4
CL354 (L)1Glu62.2%0.0
CL087 (R)1ACh51.8%0.0
LT72 (R)1ACh51.8%0.0
CB0633 (L)1Glu51.8%0.0
CB0633 (R)1Glu51.8%0.0
AN07B004 (L)1ACh51.8%0.0
CB3044 (L)2ACh51.8%0.6
LoVP16 (R)2ACh51.8%0.6
LoVP63 (R)1ACh41.4%0.0
LoVP23 (L)1ACh31.1%0.0
CB2737 (R)1ACh31.1%0.0
PLP013 (R)1ACh31.1%0.0
LoVC26 (L)1Glu31.1%0.0
CL352 (L)1Glu31.1%0.0
LoVP69 (R)1ACh31.1%0.0
CB4010 (R)2ACh31.1%0.3
CL225 (L)2ACh31.1%0.3
PLP231 (L)2ACh31.1%0.3
SMP459 (R)1ACh20.7%0.0
PLP141 (R)1GABA20.7%0.0
SMP016_a (R)1ACh20.7%0.0
IB042 (R)1Glu20.7%0.0
AOTU013 (R)1ACh20.7%0.0
IB021 (R)1ACh20.7%0.0
LoVP106 (R)1ACh20.7%0.0
SLP206 (R)1GABA20.7%0.0
LoVCLo2 (R)1unc20.7%0.0
OA-VUMa6 (M)1OA20.7%0.0
LoVP26 (L)2ACh20.7%0.0
PLP115_b (R)2ACh20.7%0.0
SMP067 (R)1Glu10.4%0.0
CL048 (R)1Glu10.4%0.0
CL014 (R)1Glu10.4%0.0
SMP016_a (L)1ACh10.4%0.0
CB2896 (L)1ACh10.4%0.0
LoVP27 (R)1ACh10.4%0.0
CB1876 (R)1ACh10.4%0.0
ATL024 (L)1Glu10.4%0.0
CB1467 (R)1ACh10.4%0.0
LoVP21 (R)1ACh10.4%0.0
CL091 (R)1ACh10.4%0.0
CL090_b (R)1ACh10.4%0.0
CB2439 (R)1ACh10.4%0.0
CB3931 (R)1ACh10.4%0.0
LC36 (R)1ACh10.4%0.0
IB054 (L)1ACh10.4%0.0
CL089_b (R)1ACh10.4%0.0
GNG657 (L)1ACh10.4%0.0
CB3578 (R)1ACh10.4%0.0
CL180 (R)1Glu10.4%0.0
SMP018 (R)1ACh10.4%0.0
SMP013 (L)1ACh10.4%0.0
5-HTPMPV01 (L)15-HT10.4%0.0
IB021 (L)1ACh10.4%0.0
PS187 (R)1Glu10.4%0.0
CL107 (R)1ACh10.4%0.0
CL031 (R)1Glu10.4%0.0
aMe15 (L)1ACh10.4%0.0
CL064 (R)1GABA10.4%0.0
LHPV3c1 (R)1ACh10.4%0.0
PLP216 (L)1GABA10.4%0.0
5-HTPMPV01 (R)15-HT10.4%0.0
CL135 (L)1ACh10.4%0.0
LoVCLo3 (L)1OA10.4%0.0
IB008 (L)1GABA10.4%0.0

Outputs

downstream
partner
#NTconns
CB2200
%
Out
CV
LoVC5 (R)1GABA276.7%0.0
IB061 (R)1ACh235.7%0.0
LoVC5 (L)1GABA225.5%0.0
IB110 (R)1Glu215.2%0.0
IB008 (L)1GABA215.2%0.0
IB009 (R)1GABA174.2%0.0
PS203 (R)1ACh143.5%0.0
IB018 (R)1ACh123.0%0.0
IB008 (R)1GABA102.5%0.0
CL235 (R)3Glu102.5%0.8
SMP544 (R)1GABA82.0%0.0
IB110 (L)1Glu82.0%0.0
PLP228 (R)1ACh71.7%0.0
IB009 (L)1GABA71.7%0.0
IB018 (L)1ACh71.7%0.0
DNae009 (R)1ACh71.7%0.0
IB071 (R)2ACh71.7%0.1
DNae009 (L)1ACh61.5%0.0
LoVC7 (R)1GABA61.5%0.0
SMP057 (R)2Glu61.5%0.3
IB010 (L)1GABA51.2%0.0
SMP066 (R)2Glu51.2%0.6
IB109 (R)1Glu41.0%0.0
SMP542 (R)1Glu41.0%0.0
CL327 (R)1ACh41.0%0.0
DNpe001 (R)1ACh41.0%0.0
DNpe001 (L)1ACh41.0%0.0
LoVP24 (L)2ACh41.0%0.5
LoVC2 (R)1GABA30.7%0.0
CB3074 (R)1ACh30.7%0.0
LoVP27 (R)1ACh30.7%0.0
CL090_e (R)1ACh30.7%0.0
IB120 (R)1Glu30.7%0.0
ATL030 (R)1Glu30.7%0.0
LoVC19 (R)1ACh30.7%0.0
5-HTPMPV03 (R)15-HT30.7%0.0
LoVP24 (R)2ACh30.7%0.3
PLP246 (L)1ACh20.5%0.0
CRE075 (R)1Glu20.5%0.0
SMP595 (R)1Glu20.5%0.0
CB2737 (R)1ACh20.5%0.0
LC36 (L)1ACh20.5%0.0
CB1851 (R)1Glu20.5%0.0
IB070 (R)1ACh20.5%0.0
CB3010 (R)1ACh20.5%0.0
CL273 (R)1ACh20.5%0.0
SMP459 (L)1ACh20.5%0.0
PS318 (R)1ACh20.5%0.0
IB061 (L)1ACh20.5%0.0
CL287 (R)1GABA20.5%0.0
SMP370 (L)1Glu20.5%0.0
DNpe055 (R)1ACh20.5%0.0
CL182 (R)2Glu20.5%0.0
CL014 (R)2Glu20.5%0.0
IB051 (R)1ACh10.2%0.0
DNpe017 (R)1ACh10.2%0.0
LoVP21 (L)1ACh10.2%0.0
SMP494 (R)1Glu10.2%0.0
IB016 (R)1Glu10.2%0.0
SMP072 (R)1Glu10.2%0.0
LAL134 (R)1GABA10.2%0.0
DNp104 (R)1ACh10.2%0.0
SMP390 (R)1ACh10.2%0.0
SMP047 (R)1Glu10.2%0.0
SMP459 (R)1ACh10.2%0.0
IB010 (R)1GABA10.2%0.0
LoVP26 (L)1ACh10.2%0.0
CL235 (L)1Glu10.2%0.0
CL042 (R)1Glu10.2%0.0
CB2896 (L)1ACh10.2%0.0
CB1876 (R)1ACh10.2%0.0
CB3044 (L)1ACh10.2%0.0
CB1896 (L)1ACh10.2%0.0
ATL024 (L)1Glu10.2%0.0
LoVP27 (L)1ACh10.2%0.0
SMP066 (L)1Glu10.2%0.0
CB3074 (L)1ACh10.2%0.0
CB4072 (R)1ACh10.2%0.0
CL167 (R)1ACh10.2%0.0
LoVP21 (R)1ACh10.2%0.0
PS107 (L)1ACh10.2%0.0
PLP182 (R)1Glu10.2%0.0
CL225 (L)1ACh10.2%0.0
CB1547 (R)1ACh10.2%0.0
VLP_TBD1 (R)1ACh10.2%0.0
CL090_d (R)1ACh10.2%0.0
CL161_a (R)1ACh10.2%0.0
CL244 (R)1ACh10.2%0.0
CL090_c (R)1ACh10.2%0.0
IB042 (R)1Glu10.2%0.0
CL225 (R)1ACh10.2%0.0
CL085_c (R)1ACh10.2%0.0
IB051 (L)1ACh10.2%0.0
SMP501 (R)1Glu10.2%0.0
CL086_a (R)1ACh10.2%0.0
CL074 (R)1ACh10.2%0.0
IB050 (R)1Glu10.2%0.0
LT72 (R)1ACh10.2%0.0
CL179 (R)1Glu10.2%0.0
PLP080 (R)1Glu10.2%0.0
CL012 (L)1ACh10.2%0.0
IB058 (R)1Glu10.2%0.0
CB0633 (L)1Glu10.2%0.0
LoVP63 (R)1ACh10.2%0.0
CB0633 (R)1Glu10.2%0.0
LoVP79 (R)1ACh10.2%0.0
CL031 (R)1Glu10.2%0.0
SLP004 (R)1GABA10.2%0.0
LoVC4 (L)1GABA10.2%0.0
LoVC3 (R)1GABA10.2%0.0
DNbe004 (R)1Glu10.2%0.0
LoVC7 (L)1GABA10.2%0.0
CB4071 (R)1ACh10.2%0.0
LoVC3 (L)1GABA10.2%0.0
VES041 (L)1GABA10.2%0.0
OA-VUMa3 (M)1OA10.2%0.0