Male CNS – Cell Type Explorer

CB2088(L)

3
Total Neurons
Right: 2 | Left: 1
log ratio : -1.00
619
Total Synapses
Post: 407 | Pre: 212
log ratio : -0.94
619
Mean Synapses
Post: 407 | Pre: 212
log ratio : -0.94
ACh(95.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (13 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
CRE(L)12831.4%-1.454722.2%
SIP(L)8520.9%-2.41167.5%
LAL(L)4310.6%0.034420.8%
LAL(R)276.6%0.002712.7%
CRE(R)153.7%1.053114.6%
CentralBrain-unspecified225.4%-0.14209.4%
SMP(L)399.6%-3.7031.4%
SLP(L)286.9%-1.8183.8%
LH(L)133.2%-1.1262.8%
SMP(R)00.0%inf73.3%
SCL(L)51.2%-inf00.0%
SIP(R)10.2%1.5831.4%
PLP(L)10.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB2088
%
In
CV
LHPD5f1 (L)1Glu319.2%0.0
CL362 (L)1ACh216.2%0.0
SMP089 (R)2Glu216.2%0.5
CL021 (L)1ACh133.8%0.0
LAL165 (L)1ACh113.3%0.0
LHAD2b1 (L)1ACh113.3%0.0
SMP174 (R)3ACh113.3%1.0
MBON26 (L)1ACh92.7%0.0
SIP087 (R)1unc92.7%0.0
SMP174 (L)4ACh82.4%0.6
CB1124 (L)1GABA72.1%0.0
LAL165 (R)1ACh72.1%0.0
CRE003_a (R)2ACh61.8%0.0
LAL050 (L)3GABA61.8%0.4
SIP029 (R)1ACh51.5%0.0
LHAV6c1 (L)4Glu51.5%0.3
CB3895 (L)1ACh41.2%0.0
FS1B_a (L)1ACh41.2%0.0
LHAV6g1 (R)1Glu41.2%0.0
CRE076 (R)1ACh41.2%0.0
LHPV1c2 (L)1ACh41.2%0.0
SIP081 (L)2ACh41.2%0.5
CRE056 (L)2GABA41.2%0.5
CRE003_b (L)2ACh41.2%0.5
CB1841 (R)2ACh41.2%0.5
LAL075 (R)1Glu30.9%0.0
SMP561 (R)1ACh30.9%0.0
CL021 (R)1ACh30.9%0.0
SIP087 (L)1unc30.9%0.0
VP1d+VP4_l2PN1 (L)1ACh30.9%0.0
WEDPN4 (L)1GABA30.9%0.0
LHPD2a4_a (L)2ACh30.9%0.3
CB2117 (L)2ACh30.9%0.3
CRE003_b (R)2ACh30.9%0.3
LAL050 (R)3GABA30.9%0.0
LAL128 (L)1DA20.6%0.0
LHPV10d1 (R)1ACh20.6%0.0
SLP072 (L)1Glu20.6%0.0
SMP145 (R)1unc20.6%0.0
MBON15-like (R)1ACh20.6%0.0
SIP003_b (L)1ACh20.6%0.0
CB1124 (R)1GABA20.6%0.0
CB1457 (L)1Glu20.6%0.0
SIP027 (R)1GABA20.6%0.0
LHPV5g2 (L)1ACh20.6%0.0
CB1128 (R)1GABA20.6%0.0
WED031 (R)1GABA20.6%0.0
CB1841 (L)1ACh20.6%0.0
ATL038 (L)1ACh20.6%0.0
ATL003 (R)1Glu20.6%0.0
GNG461 (R)1GABA20.6%0.0
LHAV6g1 (L)1Glu20.6%0.0
PPL202 (L)1DA20.6%0.0
M_smPN6t2 (R)1GABA20.6%0.0
M_spPN5t10 (R)1ACh20.6%0.0
oviIN (L)1GABA20.6%0.0
CB2550 (L)2ACh20.6%0.0
CRE003_a (L)2ACh20.6%0.0
LAL034 (L)1ACh10.3%0.0
MBON21 (R)1ACh10.3%0.0
PPL107 (L)1DA10.3%0.0
LHPV3a1 (L)1ACh10.3%0.0
WEDPN11 (L)1Glu10.3%0.0
OA-VPM3 (L)1OA10.3%0.0
CB2550 (R)1ACh10.3%0.0
SIP003_a (R)1ACh10.3%0.0
SIP011 (L)1Glu10.3%0.0
LAL037 (L)1ACh10.3%0.0
SIP081 (R)1ACh10.3%0.0
SIP013 (L)1Glu10.3%0.0
SLP314 (L)1Glu10.3%0.0
CB1128 (L)1GABA10.3%0.0
LHPD2a4_b (L)1ACh10.3%0.0
SMP328_b (L)1ACh10.3%0.0
SMP059 (R)1Glu10.3%0.0
CB2936 (R)1GABA10.3%0.0
SIP048 (L)1ACh10.3%0.0
SMP059 (L)1Glu10.3%0.0
CRE017 (L)1ACh10.3%0.0
SIP027 (L)1GABA10.3%0.0
PLP048 (L)1Glu10.3%0.0
MBON15 (L)1ACh10.3%0.0
mALB1 (R)1GABA10.3%0.0
SMP561 (L)1ACh10.3%0.0
PLP187 (R)1ACh10.3%0.0
PLP026 (L)1GABA10.3%0.0
FB5K (L)1Glu10.3%0.0
LAL144 (R)1ACh10.3%0.0
SMP568_d (R)1ACh10.3%0.0
CRE089 (L)1ACh10.3%0.0
WEDPN2A (L)1GABA10.3%0.0
LHPD2c7 (L)1Glu10.3%0.0
VP1d_il2PN (R)1ACh10.3%0.0
LAL175 (L)1ACh10.3%0.0
LHPV8a1 (L)1ACh10.3%0.0
M_l2PNm14 (L)1ACh10.3%0.0
M_l2PNl23 (L)1ACh10.3%0.0
SLP057 (L)1GABA10.3%0.0
PPM1201 (L)1DA10.3%0.0
SLP457 (L)1unc10.3%0.0
LHCENT14 (L)1Glu10.3%0.0
MBON26 (R)1ACh10.3%0.0
OA-VUMa6 (M)1OA10.3%0.0

Outputs

downstream
partner
#NTconns
CB2088
%
Out
CV
LAL050 (R)4GABA417.4%0.4
LAL034 (R)4ACh346.1%0.5
LAL050 (L)4GABA305.4%0.3
LAL034 (L)4ACh274.9%0.1
FB4X (L)1Glu193.4%0.0
CRE003_b (L)5ACh193.4%0.9
SIP081 (L)2ACh152.7%0.1
SIP081 (R)2ACh142.5%0.3
FB4X (R)1Glu132.3%0.0
FB5L (R)1Glu132.3%0.0
CRE003_b (R)4ACh122.2%0.3
LAL112 (L)2GABA101.8%0.0
CB2936 (L)1GABA91.6%0.0
FB6N (L)1Glu91.6%0.0
CB2117 (R)2ACh91.6%0.1
LAL112 (R)2GABA91.6%0.1
LAL073 (L)1Glu81.4%0.0
LAL204 (R)1ACh81.4%0.0
FB5I (L)1Glu71.3%0.0
SMP272 (R)1ACh71.3%0.0
LHPV5g1_b (L)2ACh71.3%0.1
CB0325 (L)1ACh61.1%0.0
CRE095 (L)2ACh61.1%0.7
LAL175 (L)2ACh61.1%0.7
OA-VUMa1 (M)2OA61.1%0.7
FB4Q_c (R)2Glu61.1%0.0
CB1956 (L)1ACh50.9%0.0
LAL177 (L)1ACh50.9%0.0
FB4Q_c (L)1Glu50.9%0.0
CB2936 (R)1GABA50.9%0.0
FB4Q_a (L)1Glu50.9%0.0
LAL160 (R)1ACh50.9%0.0
FB5L (L)1Glu50.9%0.0
CB2846 (R)2ACh50.9%0.6
LAL128 (L)1DA40.7%0.0
LAL032 (R)1ACh40.7%0.0
CB2117 (L)1ACh40.7%0.0
FB5K (R)1Glu40.7%0.0
LHPV5g2 (L)1ACh40.7%0.0
CL021 (R)1ACh40.7%0.0
LAL171 (L)1ACh40.7%0.0
FB5X (L)2Glu40.7%0.5
SMP409 (R)2ACh40.7%0.0
LAL175 (R)2ACh40.7%0.0
LAL172 (L)1ACh30.5%0.0
CB1956 (R)1ACh30.5%0.0
FB4Q_b (L)1Glu30.5%0.0
SMP112 (R)1ACh30.5%0.0
ATL033 (L)1Glu30.5%0.0
FB4P_b (L)1Glu30.5%0.0
FB5K (L)1Glu30.5%0.0
FB4Q_a (R)1Glu30.5%0.0
LAL051 (R)1Glu30.5%0.0
CB2846 (L)2ACh30.5%0.3
CRE056 (R)2GABA30.5%0.3
FB4Q_b (R)1Glu20.4%0.0
SMP145 (R)1unc20.4%0.0
SMP142 (L)1unc20.4%0.0
IB049 (L)1ACh20.4%0.0
LHPV6f1 (L)1ACh20.4%0.0
CB1457 (L)1Glu20.4%0.0
FB2K (L)1Glu20.4%0.0
FB2C (L)1Glu20.4%0.0
LAL063 (R)1GABA20.4%0.0
SMP198 (L)1Glu20.4%0.0
CB3065 (R)1GABA20.4%0.0
CB2066 (R)1GABA20.4%0.0
LHPD5f1 (L)1Glu20.4%0.0
LAL164 (L)1ACh20.4%0.0
CL021 (L)1ACh20.4%0.0
LAL182 (L)1ACh20.4%0.0
CRE011 (L)1ACh20.4%0.0
CRE056 (L)2GABA20.4%0.0
PAM12 (L)2DA20.4%0.0
SIP003_a (L)2ACh20.4%0.0
LAL144 (R)2ACh20.4%0.0
CRE071 (R)1ACh10.2%0.0
LAL032 (L)1ACh10.2%0.0
CB3065 (L)1GABA10.2%0.0
MBON04 (R)1Glu10.2%0.0
SMP142 (R)1unc10.2%0.0
DNpe023 (R)1ACh10.2%0.0
LHPV5e1 (L)1ACh10.2%0.0
PPL107 (L)1DA10.2%0.0
ATL037 (R)1ACh10.2%0.0
WED002 (L)1ACh10.2%0.0
MBON27 (R)1ACh10.2%0.0
LHAV6c1 (L)1Glu10.2%0.0
SMP016_b (L)1ACh10.2%0.0
CRE070 (L)1ACh10.2%0.0
LHPV5c1_d (L)1ACh10.2%0.0
CRE003_a (L)1ACh10.2%0.0
CB1841 (R)1ACh10.2%0.0
CB2550 (L)1ACh10.2%0.0
CB2736 (L)1Glu10.2%0.0
LAL063 (L)1GABA10.2%0.0
LHPD2a4_a (L)1ACh10.2%0.0
CB3056 (L)1Glu10.2%0.0
SIP003_b (R)1ACh10.2%0.0
ATL005 (R)1Glu10.2%0.0
LHPV7a2 (L)1ACh10.2%0.0
LAL144 (L)1ACh10.2%0.0
CRE008 (L)1Glu10.2%0.0
SIP027 (L)1GABA10.2%0.0
AOTU030 (L)1ACh10.2%0.0
CRE071 (L)1ACh10.2%0.0
LAL075 (R)1Glu10.2%0.0
SIP070 (L)1ACh10.2%0.0
AVLP752m (R)1ACh10.2%0.0
SMP151 (R)1GABA10.2%0.0
FB4H (L)1Glu10.2%0.0
FB5Y_b (L)1Glu10.2%0.0
SIP087 (R)1unc10.2%0.0
LAL186 (L)1ACh10.2%0.0
LAL076 (L)1Glu10.2%0.0
ATL001 (L)1Glu10.2%0.0
SIP018 (L)1Glu10.2%0.0
CRE076 (L)1ACh10.2%0.0
CRE076 (R)1ACh10.2%0.0
SIP087 (L)1unc10.2%0.0
SMP012 (L)1Glu10.2%0.0
LAL073 (R)1Glu10.2%0.0
LHCENT14 (L)1Glu10.2%0.0
ATL033 (R)1Glu10.2%0.0
ATL001 (R)1Glu10.2%0.0