Male CNS – Cell Type Explorer

CB2041(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
790
Total Synapses
Post: 542 | Pre: 248
log ratio : -1.13
790
Mean Synapses
Post: 542 | Pre: 248
log ratio : -1.13
ACh(82.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AVLP(L)49090.4%-2.608132.7%
SCL(R)173.1%1.645321.4%
SCL(L)122.2%1.944618.5%
SLP(R)71.3%1.72239.3%
CentralBrain-unspecified112.0%-0.14104.0%
ICL(R)20.4%3.25197.7%
SLP(L)30.6%2.22145.6%
AVLP(R)00.0%inf20.8%

Connectivity

Inputs

upstream
partner
#NTconns
CB2041
%
In
CV
AVLP126 (L)2ACh245.3%0.0
AVLP431 (R)1ACh184.0%0.0
AVLP076 (L)1GABA173.8%0.0
AVLP374 (L)1ACh153.3%0.0
AVLP055 (L)2Glu153.3%0.7
AVLP431 (L)1ACh143.1%0.0
AVLP001 (L)1GABA143.1%0.0
AVLP110_b (R)2ACh132.9%0.7
AVLP079 (L)1GABA112.4%0.0
AN05B102c (R)1ACh102.2%0.0
AVLP004_a (L)2GABA102.2%0.2
AVLP113 (L)1ACh92.0%0.0
AN09B027 (R)1ACh92.0%0.0
AVLP112 (R)2ACh92.0%0.6
CB1706 (R)1ACh81.8%0.0
AN05B102a (R)1ACh81.8%0.0
AVLP116 (R)2ACh81.8%0.8
AVLP532 (L)1unc71.6%0.0
AVLP082 (L)1GABA71.6%0.0
CB1301 (R)1ACh71.6%0.0
CB2086 (L)1Glu71.6%0.0
AVLP086 (L)1GABA71.6%0.0
AVLP145 (R)2ACh71.6%0.4
CB4215 (L)1ACh61.3%0.0
AVLP110_b (L)2ACh61.3%0.7
CB1085 (R)2ACh61.3%0.0
SLP230 (L)1ACh51.1%0.0
AVLP412 (L)1ACh51.1%0.0
CB1301 (L)1ACh51.1%0.0
CB1706 (L)1ACh40.9%0.0
AVLP005 (L)1GABA40.9%0.0
AVLP399 (L)1ACh40.9%0.0
AVLP739m (L)1ACh40.9%0.0
CB0925 (L)1ACh40.9%0.0
PVLP127 (L)1ACh40.9%0.0
AVLP252 (L)1GABA40.9%0.0
PPM1203 (L)1DA40.9%0.0
AVLP215 (L)1GABA40.9%0.0
CB4217 (L)2ACh40.9%0.5
AVLP225_b2 (L)2ACh40.9%0.0
AVLP311_a1 (L)1ACh30.7%0.0
CB3578 (R)1ACh30.7%0.0
AVLP222 (L)1ACh30.7%0.0
AVLP002 (L)1GABA30.7%0.0
CB0029 (R)1ACh30.7%0.0
AVLP430 (L)1ACh30.7%0.0
AVLP080 (L)1GABA30.7%0.0
OA-VPM4 (L)1OA30.7%0.0
vpoIN (L)2GABA30.7%0.3
AVLP229 (L)1ACh20.4%0.0
AVLP225_b3 (L)1ACh20.4%0.0
AVLP274_b (L)1ACh20.4%0.0
CB2041 (R)1ACh20.4%0.0
CB3959 (L)1Glu20.4%0.0
CB3690 (L)1ACh20.4%0.0
CB4116 (L)1ACh20.4%0.0
SIP121m (L)1Glu20.4%0.0
OA-VPM4 (R)1OA20.4%0.0
AVLP339 (L)1ACh20.4%0.0
PLP016 (L)1GABA20.4%0.0
CB2321 (R)2ACh20.4%0.0
CB3411 (L)1GABA10.2%0.0
CL094 (L)1ACh10.2%0.0
CB1017 (L)1ACh10.2%0.0
CB3019 (L)1ACh10.2%0.0
AVLP048 (L)1ACh10.2%0.0
AVLP063 (L)1Glu10.2%0.0
PLP074 (R)1GABA10.2%0.0
CB2321 (L)1ACh10.2%0.0
CB0829 (L)1Glu10.2%0.0
PVLP013 (L)1ACh10.2%0.0
AVLP203_a (L)1GABA10.2%0.0
AVLP115 (L)1ACh10.2%0.0
AVLP112 (L)1ACh10.2%0.0
SLP221 (L)1ACh10.2%0.0
CB1085 (L)1ACh10.2%0.0
CL160 (R)1ACh10.2%0.0
AVLP003 (L)1GABA10.2%0.0
AVLP274_a (L)1ACh10.2%0.0
CL070_b (L)1ACh10.2%0.0
CL097 (L)1ACh10.2%0.0
AVLP225_b1 (L)1ACh10.2%0.0
CB1187 (R)1ACh10.2%0.0
AVLP225_a (R)1ACh10.2%0.0
CB4214 (L)1ACh10.2%0.0
CB3576 (L)1ACh10.2%0.0
CB3635 (R)1Glu10.2%0.0
PVLP063 (R)1ACh10.2%0.0
PVLP049 (R)1ACh10.2%0.0
AVLP549 (L)1Glu10.2%0.0
AVLP269_b (R)1ACh10.2%0.0
CB1717 (L)1ACh10.2%0.0
CL096 (L)1ACh10.2%0.0
AVLP306 (L)1ACh10.2%0.0
AVLP312 (L)1ACh10.2%0.0
AVLP271 (L)1ACh10.2%0.0
CB0218 (L)1ACh10.2%0.0
WED051 (R)1ACh10.2%0.0
CB3578 (L)1ACh10.2%0.0
CB1302 (L)1ACh10.2%0.0
LHAD2c1 (R)1ACh10.2%0.0
AVLP267 (L)1ACh10.2%0.0
AVLP212 (L)1ACh10.2%0.0
CL075_b (R)1ACh10.2%0.0
AVLP117 (L)1ACh10.2%0.0
AVLP212 (R)1ACh10.2%0.0
CRZ01 (L)1unc10.2%0.0
CB3545 (L)1ACh10.2%0.0
AVLP060 (R)1Glu10.2%0.0
CL073 (L)1ACh10.2%0.0
AVLP322 (L)1ACh10.2%0.0
CRZ02 (R)1unc10.2%0.0
CL365 (R)1unc10.2%0.0
PVLP002 (R)1ACh10.2%0.0
AVLP413 (L)1ACh10.2%0.0
SLP059 (L)1GABA10.2%0.0
AVLP018 (R)1ACh10.2%0.0
AVLP533 (L)1GABA10.2%0.0
AVLP555 (L)1Glu10.2%0.0
AVLP369 (L)1ACh10.2%0.0
LoVP53 (L)1ACh10.2%0.0
CL094 (R)1ACh10.2%0.0
CL365 (L)1unc10.2%0.0
AVLP478 (L)1GABA10.2%0.0
AVLP215 (R)1GABA10.2%0.0
OA-VUMa4 (M)1OA10.2%0.0
SMP001 (L)1unc10.2%0.0
AstA1 (R)1GABA10.2%0.0
OA-VUMa8 (M)1OA10.2%0.0
DNp27 (R)1ACh10.2%0.0

Outputs

downstream
partner
#NTconns
CB2041
%
Out
CV
CL089_b (L)3ACh193.9%0.9
AVLP001 (L)1GABA183.7%0.0
CL025 (R)1Glu153.1%0.0
CL071_a (R)1ACh142.9%0.0
AVLP532 (L)1unc132.7%0.0
CL089_c (R)1ACh122.4%0.0
CL072 (R)1ACh122.4%0.0
AVLP211 (R)1ACh122.4%0.0
CL089_b (R)2ACh112.2%0.6
AVLP312 (L)2ACh102.0%0.8
CL025 (L)1Glu91.8%0.0
AVLP215 (L)1GABA91.8%0.0
SMP569 (L)2ACh81.6%0.5
AVLP708m (R)1ACh71.4%0.0
AVLP079 (L)1GABA71.4%0.0
AVLP492 (R)2ACh71.4%0.1
CL029_a (L)1Glu61.2%0.0
PS096 (L)1GABA61.2%0.0
CL072 (L)1ACh61.2%0.0
AVLP046 (L)1ACh61.2%0.0
CL029_a (R)1Glu61.2%0.0
CL111 (L)1ACh61.2%0.0
AVLP474 (L)1GABA61.2%0.0
AVLP442 (R)1ACh51.0%0.0
SMP042 (R)1Glu51.0%0.0
SMP579 (R)1unc51.0%0.0
CL361 (L)1ACh51.0%0.0
AVLP492 (L)2ACh51.0%0.2
AVLP115 (L)2ACh51.0%0.2
AVLP173 (L)1ACh40.8%0.0
CL070_a (L)1ACh40.8%0.0
CB2182 (L)1Glu40.8%0.0
CL184 (R)1Glu40.8%0.0
CB0029 (R)1ACh40.8%0.0
SMP026 (R)1ACh40.8%0.0
AVLP215 (R)1GABA40.8%0.0
CL036 (L)1Glu40.8%0.0
AVLP096 (L)2GABA40.8%0.0
CL168 (R)1ACh30.6%0.0
CL169 (R)1ACh30.6%0.0
SMP383 (R)1ACh30.6%0.0
CL170 (R)1ACh30.6%0.0
CL023 (R)1ACh30.6%0.0
CL073 (R)1ACh30.6%0.0
PS092 (L)1GABA30.6%0.0
PVLP063 (L)1ACh30.6%0.0
CL109 (L)1ACh30.6%0.0
AVLP571 (L)1ACh30.6%0.0
AVLP442 (L)1ACh30.6%0.0
CL336 (R)1ACh20.4%0.0
PLP080 (L)1Glu20.4%0.0
DNp27 (L)1ACh20.4%0.0
CL303 (R)1ACh20.4%0.0
PLP074 (R)1GABA20.4%0.0
CL002 (L)1Glu20.4%0.0
AVLP318 (L)1ACh20.4%0.0
AVLP111 (L)1ACh20.4%0.0
SMP506 (R)1ACh20.4%0.0
CL185 (R)1Glu20.4%0.0
SLP221 (L)1ACh20.4%0.0
CB3671 (L)1ACh20.4%0.0
AVLP230 (L)1ACh20.4%0.0
SMP068 (R)1Glu20.4%0.0
CL185 (L)1Glu20.4%0.0
CB1269 (L)1ACh20.4%0.0
CL235 (L)1Glu20.4%0.0
CRE104 (L)1ACh20.4%0.0
CB3287b (L)1ACh20.4%0.0
CL191_a (L)1Glu20.4%0.0
AVLP274_b (L)1ACh20.4%0.0
CL166 (R)1ACh20.4%0.0
AVLP480 (L)1GABA20.4%0.0
SLP228 (L)1ACh20.4%0.0
PVLP128 (R)1ACh20.4%0.0
CB3578 (L)1ACh20.4%0.0
AVLP110_a (L)1ACh20.4%0.0
AVLP346 (L)1ACh20.4%0.0
AVLP046 (R)1ACh20.4%0.0
SMP506 (L)1ACh20.4%0.0
AVLP115 (R)1ACh20.4%0.0
CL070_b (R)1ACh20.4%0.0
CRZ02 (L)1unc20.4%0.0
AVLP266 (L)1ACh20.4%0.0
CL071_b (L)1ACh20.4%0.0
CL069 (L)1ACh20.4%0.0
AVLP211 (L)1ACh20.4%0.0
CL111 (R)1ACh20.4%0.0
AVLP086 (R)1GABA20.4%0.0
AVLP594 (L)1unc20.4%0.0
AVLP032 (L)1ACh20.4%0.0
GNG103 (R)1GABA20.4%0.0
CB3578 (R)2ACh20.4%0.0
CL086_b (R)2ACh20.4%0.0
CB4217 (L)1ACh10.2%0.0
AVLP109 (L)1ACh10.2%0.0
AVLP126 (L)1ACh10.2%0.0
SMP072 (R)1Glu10.2%0.0
AVLP055 (L)1Glu10.2%0.0
AVLP145 (L)1ACh10.2%0.0
AVLP433_b (L)1ACh10.2%0.0
AVLP281 (L)1ACh10.2%0.0
AVLP309 (L)1ACh10.2%0.0
CL160 (R)1ACh10.2%0.0
CB2251 (L)1GABA10.2%0.0
CB3545 (L)1ACh10.2%0.0
PVLP092 (L)1ACh10.2%0.0
PS097 (R)1GABA10.2%0.0
CL070_b (L)1ACh10.2%0.0
AVLP062 (L)1Glu10.2%0.0
CL097 (L)1ACh10.2%0.0
CL196 (L)1Glu10.2%0.0
CB4070 (R)1ACh10.2%0.0
AVLP110_b (L)1ACh10.2%0.0
CB3569 (L)1Glu10.2%0.0
CB4216 (L)1ACh10.2%0.0
CB1187 (L)1ACh10.2%0.0
CB4071 (R)1ACh10.2%0.0
CB3629 (L)1Glu10.2%0.0
CB2625 (R)1ACh10.2%0.0
CB2041 (R)1ACh10.2%0.0
AVLP279 (L)1ACh10.2%0.0
CL089_c (L)1ACh10.2%0.0
CB4214 (L)1ACh10.2%0.0
CL328 (R)1ACh10.2%0.0
AVLP063 (R)1Glu10.2%0.0
CL090_d (L)1ACh10.2%0.0
CB3569 (R)1Glu10.2%0.0
SMP381_b (L)1ACh10.2%0.0
CL087 (R)1ACh10.2%0.0
CB1950 (R)1ACh10.2%0.0
CB4165 (L)1ACh10.2%0.0
PLP064_a (L)1ACh10.2%0.0
SLP223 (L)1ACh10.2%0.0
AVLP060 (L)1Glu10.2%0.0
CL071_a (L)1ACh10.2%0.0
CB0763 (R)1ACh10.2%0.0
CL161_b (L)1ACh10.2%0.0
AVLP040 (L)1ACh10.2%0.0
AVLP173 (R)1ACh10.2%0.0
AVLP212 (L)1ACh10.2%0.0
CL125 (R)1Glu10.2%0.0
CL097 (R)1ACh10.2%0.0
AVLP108 (L)1ACh10.2%0.0
AVLP451 (L)1ACh10.2%0.0
AVLP323 (L)1ACh10.2%0.0
CL073 (L)1ACh10.2%0.0
CL070_a (R)1ACh10.2%0.0
PVLP123 (R)1ACh10.2%0.0
CL340 (R)1ACh10.2%0.0
AVLP431 (R)1ACh10.2%0.0
PVLP002 (L)1ACh10.2%0.0
PS181 (R)1ACh10.2%0.0
CL155 (R)1ACh10.2%0.0
CL069 (R)1ACh10.2%0.0
AVLP574 (L)1ACh10.2%0.0
SLP250 (L)1Glu10.2%0.0
AVLP314 (R)1ACh10.2%0.0
CL110 (R)1ACh10.2%0.0
AVLP592 (L)1ACh10.2%0.0
OA-VPM4 (R)1OA10.2%0.0
AVLP339 (L)1ACh10.2%0.0
CL157 (R)1ACh10.2%0.0
AVLP086 (L)1GABA10.2%0.0
AVLP478 (L)1GABA10.2%0.0
MeVC3 (R)1ACh10.2%0.0
CL110 (L)1ACh10.2%0.0
CL063 (L)1GABA10.2%0.0
AVLP076 (L)1GABA10.2%0.0
CB0381 (L)1ACh10.2%0.0
AstA1 (R)1GABA10.2%0.0
OA-VPM4 (L)1OA10.2%0.0