Male CNS – Cell Type Explorer

CB1879(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
500
Total Synapses
Post: 277 | Pre: 223
log ratio : -0.31
500
Mean Synapses
Post: 277 | Pre: 223
log ratio : -0.31
ACh(91.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LH(R)23083.0%-2.125323.8%
SLP(R)3512.6%2.2817076.2%
CentralBrain-unspecified103.6%-inf00.0%
PLP(R)20.7%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1879
%
In
CV
VC4_adPN (R)3ACh4818.3%0.2
CB1570 (R)2ACh155.7%0.3
LHAV6a1 (R)2ACh155.7%0.1
VC5_lvPN (R)3ACh93.4%0.7
VM2_adPN (R)1ACh72.7%0.0
LHPV7b1 (R)1ACh62.3%0.0
DP1l_vPN (R)1GABA62.3%0.0
DL3_lPN (R)1ACh62.3%0.0
LHAV6a3 (R)1ACh51.9%0.0
VM7v_adPN (R)1ACh51.9%0.0
LHPV12a1 (R)1GABA51.9%0.0
DP1m_vPN (R)2GABA51.9%0.2
CB2004 (R)2GABA51.9%0.2
VM4_lvPN (R)1ACh41.5%0.0
VA1d_vPN (R)1GABA41.5%0.0
CSD (L)15-HT41.5%0.0
PPL201 (R)1DA41.5%0.0
OA-VUMa2 (M)2OA41.5%0.5
LHAV4a5 (R)1GABA31.1%0.0
LHPV4h3 (R)1Glu31.1%0.0
LHPV4a11 (R)1Glu31.1%0.0
CB1405 (R)1Glu31.1%0.0
LHCENT2 (R)1GABA31.1%0.0
CB1945 (R)2Glu31.1%0.3
SLP457 (R)2unc31.1%0.3
LHPV4b4 (R)3Glu31.1%0.0
LHAD1a2 (R)1ACh20.8%0.0
PLP_TBD1 (R)1Glu20.8%0.0
LHAV6a8 (R)1Glu20.8%0.0
LHPV4a7_d (R)1Glu20.8%0.0
LHCENT12a (R)1Glu20.8%0.0
LHAV3e4_b (R)1ACh20.8%0.0
LHCENT6 (R)1GABA20.8%0.0
LHCENT9 (R)1GABA20.8%0.0
DM3_adPN (R)1ACh20.8%0.0
DM2_lPN (R)2ACh20.8%0.0
VM6_lvPN (R)2ACh20.8%0.0
LHPV4a5 (R)2Glu20.8%0.0
LHAV2m1 (R)2GABA20.8%0.0
LHCENT10 (R)2GABA20.8%0.0
OA-VPM3 (L)1OA10.4%0.0
SLP391 (R)1ACh10.4%0.0
LHPV5c1_c (R)1ACh10.4%0.0
LHPV5c1 (R)1ACh10.4%0.0
CB2174 (R)1ACh10.4%0.0
SLP287 (R)1Glu10.4%0.0
LHPV5c1_a (R)1ACh10.4%0.0
LHAD1b4 (R)1ACh10.4%0.0
CB4208 (R)1ACh10.4%0.0
LHPD3a4_c (R)1Glu10.4%0.0
CB4115 (R)1Glu10.4%0.0
CB2790 (R)1Glu10.4%0.0
LHPV2b3 (R)1GABA10.4%0.0
MB-C1 (R)1GABA10.4%0.0
CB1850 (R)1Glu10.4%0.0
CB2687 (R)1ACh10.4%0.0
SLP337 (R)1Glu10.4%0.0
CB1246 (R)1GABA10.4%0.0
CB2480 (R)1GABA10.4%0.0
LHAD1b2 (R)1ACh10.4%0.0
LHPV4c2 (R)1Glu10.4%0.0
LHAD1j1 (R)1ACh10.4%0.0
LHAV3b1 (R)1ACh10.4%0.0
LHPD3c1 (R)1Glu10.4%0.0
LHPV5j1 (R)1ACh10.4%0.0
CB4100 (R)1ACh10.4%0.0
LHPV4g1 (R)1Glu10.4%0.0
CB0996 (R)1ACh10.4%0.0
CB1389 (R)1ACh10.4%0.0
LHPV4a10 (R)1Glu10.4%0.0
CB0396 (R)1Glu10.4%0.0
CB3464 (R)1Glu10.4%0.0
LHAD1a4_a (R)1ACh10.4%0.0
CB2805 (R)1ACh10.4%0.0
CB2831 (R)1GABA10.4%0.0
VL2p_vPN (R)1GABA10.4%0.0
CB2087 (R)1unc10.4%0.0
LHPV4j2 (R)1Glu10.4%0.0
SLP255 (R)1Glu10.4%0.0
VP1m+_lvPN (R)1Glu10.4%0.0
SLP077 (R)1Glu10.4%0.0
GNG489 (R)1ACh10.4%0.0
VM4_adPN (R)1ACh10.4%0.0
VA1v_adPN (R)1ACh10.4%0.0
SMP503 (L)1unc10.4%0.0
LHAV2d1 (R)1ACh10.4%0.0
LHCENT1 (R)1GABA10.4%0.0
SLP238 (R)1ACh10.4%0.0
SLP004 (R)1GABA10.4%0.0
CSD (R)15-HT10.4%0.0
VC1_lPN (R)1ACh10.4%0.0
DM4_adPN (R)1ACh10.4%0.0
VA2_adPN (R)1ACh10.4%0.0

Outputs

downstream
partner
#NTconns
CB1879
%
Out
CV
LHAV3k5 (R)1Glu328.7%0.0
CB3221 (R)1Glu164.3%0.0
SLP199 (R)3Glu164.3%0.5
SLP283,SLP284 (R)2Glu154.1%0.3
CB4121 (R)3Glu133.5%0.7
SLP012 (R)3Glu133.5%0.4
LHCENT2 (R)1GABA113.0%0.0
LHAV5a8 (R)2ACh113.0%0.8
CB1179 (R)2Glu102.7%0.2
AVLP315 (R)1ACh82.2%0.0
mAL6 (L)2GABA82.2%0.5
SLP183 (R)2Glu82.2%0.2
SLP112 (R)3ACh82.2%0.4
LHAV1f1 (R)4ACh82.2%0.4
SLP390 (R)1ACh61.6%0.0
LHCENT12b (R)2Glu61.6%0.7
mAL4F (L)1Glu51.4%0.0
SLP015_b (R)1Glu51.4%0.0
SLP378 (R)1Glu51.4%0.0
5-HTPMPD01 (R)15-HT51.4%0.0
LHCENT6 (R)1GABA51.4%0.0
SLP240_b (R)3ACh51.4%0.3
SLP237 (R)1ACh41.1%0.0
LHAD1k1 (R)1ACh41.1%0.0
SLP377 (R)1Glu41.1%0.0
PPL201 (R)1DA41.1%0.0
CB1359 (R)2Glu41.1%0.5
CB4120 (R)2Glu41.1%0.5
SLP289 (R)2Glu41.1%0.5
CB3477 (R)1Glu30.8%0.0
SLP198 (R)1Glu30.8%0.0
CB1174 (R)1Glu30.8%0.0
LHAV4a1_b (R)1GABA30.8%0.0
SLP178 (R)1Glu30.8%0.0
SLP058 (R)1unc30.8%0.0
SLP411 (R)1Glu30.8%0.0
SLP040 (R)2ACh30.8%0.3
LHPV6a1 (R)2ACh30.8%0.3
SLP017 (R)2Glu30.8%0.3
LHPD4e1_b (R)1Glu20.5%0.0
CB1590 (R)1Glu20.5%0.0
CB4141 (L)1ACh20.5%0.0
SIP047 (R)1ACh20.5%0.0
LHAD1d1 (R)1ACh20.5%0.0
SLP241 (R)1ACh20.5%0.0
SLP018 (R)1Glu20.5%0.0
LHAV3b8 (R)1ACh20.5%0.0
LHPV2b4 (R)1GABA20.5%0.0
CB1593 (R)1Glu20.5%0.0
SLP202 (R)1Glu20.5%0.0
LHAV2n1 (R)1GABA20.5%0.0
LHAV3j1 (R)1ACh20.5%0.0
SMP549 (R)1ACh20.5%0.0
CB1073 (R)2ACh20.5%0.0
LHAD1i1 (R)2ACh20.5%0.0
PAM10 (R)1DA10.3%0.0
SMP049 (R)1GABA10.3%0.0
CB0943 (R)1ACh10.3%0.0
SMP389_a (R)1ACh10.3%0.0
VC4_adPN (R)1ACh10.3%0.0
SLP389 (R)1ACh10.3%0.0
SLP204 (R)1Glu10.3%0.0
LHAD3f1_b (R)1ACh10.3%0.0
CB2040 (R)1ACh10.3%0.0
LHAV5a2_a3 (R)1ACh10.3%0.0
CB3121 (R)1ACh10.3%0.0
CB1697 (R)1ACh10.3%0.0
CB1931 (R)1Glu10.3%0.0
CB1289 (R)1ACh10.3%0.0
CB4122 (R)1Glu10.3%0.0
CB2530 (R)1Glu10.3%0.0
CB2919 (R)1ACh10.3%0.0
LHPV5a2 (R)1ACh10.3%0.0
CB1850 (R)1Glu10.3%0.0
CB1333 (R)1ACh10.3%0.0
CB2089 (R)1ACh10.3%0.0
CB3506 (R)1Glu10.3%0.0
CB3553 (R)1Glu10.3%0.0
SLP288 (R)1Glu10.3%0.0
CB2184 (R)1ACh10.3%0.0
CB3030 (R)1ACh10.3%0.0
CB2895 (R)1ACh10.3%0.0
LHAV5a1 (R)1ACh10.3%0.0
CB4115 (R)1Glu10.3%0.0
LHPD4a2 (R)1Glu10.3%0.0
CB2298 (R)1Glu10.3%0.0
SLP176 (R)1Glu10.3%0.0
LHAV5a9_a (R)1ACh10.3%0.0
LHAV3b1 (R)1ACh10.3%0.0
CB1653 (R)1Glu10.3%0.0
LHPV4b9 (R)1Glu10.3%0.0
CB1560 (R)1ACh10.3%0.0
CB0396 (R)1Glu10.3%0.0
SLP186 (R)1unc10.3%0.0
LHAV3b2_c (R)1ACh10.3%0.0
CB2805 (R)1ACh10.3%0.0
CB3023 (R)1ACh10.3%0.0
LHAV2f2_b (R)1GABA10.3%0.0
LHPV2b5 (R)1GABA10.3%0.0
CB2087 (R)1unc10.3%0.0
SLP113 (R)1ACh10.3%0.0
SLP153 (R)1ACh10.3%0.0
LHAV5c1 (R)1ACh10.3%0.0
LHAV6a8 (R)1Glu10.3%0.0
LHPV4l1 (R)1Glu10.3%0.0
SLP047 (R)1ACh10.3%0.0
SLP077 (R)1Glu10.3%0.0
LHAV1e1 (R)1GABA10.3%0.0
LHAD1h1 (R)1GABA10.3%0.0
AVLP024_b (R)1ACh10.3%0.0
LHPV6c1 (R)1ACh10.3%0.0
SLP441 (R)1ACh10.3%0.0
SLP238 (R)1ACh10.3%0.0
SLP238 (L)1ACh10.3%0.0