Male CNS – Cell Type Explorer

CB1849(R)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,255
Total Synapses
Post: 843 | Pre: 412
log ratio : -1.03
627.5
Mean Synapses
Post: 421.5 | Pre: 206
log ratio : -1.03
ACh(95.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WED(R)61873.3%-1.8716941.0%
PLP(R)8410.0%1.2720249.0%
AMMC(R)698.2%-5.1120.5%
SAD495.8%-inf00.0%
SCL(R)50.6%2.43276.6%
CentralBrain-unspecified121.4%-0.4292.2%
GNG40.5%-inf00.0%
LH(R)10.1%1.5830.7%
AOTU(R)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1849
%
In
CV
WED098 (R)3Glu46.511.8%0.4
WED100 (R)2Glu36.59.3%0.0
SAD004 (R)4ACh27.57.0%0.7
WED143_a (L)3ACh26.56.7%0.6
PS126 (L)1ACh25.56.5%0.0
AMMC031 (R)3GABA215.3%0.2
SAD077 (R)3Glu184.6%0.5
WEDPN17_b (R)3ACh102.5%0.9
WED143_a (R)2ACh92.3%0.6
WED026 (R)3GABA92.3%0.6
WEDPN17_a1 (R)4ACh8.52.2%0.6
AN06B009 (L)1GABA71.8%0.0
WED143_b (L)2ACh71.8%0.1
SAD003 (R)3ACh6.51.6%0.5
WED26 (R)2GABA51.3%0.4
DNg106 (R)4GABA4.51.1%1.0
CB2558 (R)4ACh4.51.1%0.4
WED143_b (R)2ACh3.50.9%0.1
WEDPN8C (R)5ACh3.50.9%0.3
CB2475 (L)1ACh30.8%0.0
DNge180 (L)1ACh30.8%0.0
JO-C/D/E6ACh30.8%0.0
PLP143 (R)1GABA2.50.6%0.0
LHPV2a2 (R)1GABA2.50.6%0.0
DNge089 (R)1ACh2.50.6%0.0
LoVP101 (R)1ACh2.50.6%0.0
SAD093 (R)1ACh2.50.6%0.0
PLP103 (R)1ACh2.50.6%0.0
WED016 (R)1ACh20.5%0.0
CB1464 (L)2ACh20.5%0.5
WEDPN9 (R)1ACh20.5%0.0
WED101 (R)2Glu20.5%0.5
CL022_c (R)1ACh20.5%0.0
PLP073 (R)2ACh1.50.4%0.3
AMMC015 (R)2GABA1.50.4%0.3
AMMC030 (R)1GABA1.50.4%0.0
DNge138 (M)1unc1.50.4%0.0
WED167 (R)2ACh1.50.4%0.3
CB2431 (R)2GABA1.50.4%0.3
WEDPN17_c (R)1ACh1.50.4%0.0
WEDPN17_a2 (R)2ACh1.50.4%0.3
SAD011 (R)2GABA1.50.4%0.3
SAD113 (R)2GABA1.50.4%0.3
CB2309 (R)1ACh10.3%0.0
PLP115_b (R)1ACh10.3%0.0
CB1023 (R)1Glu10.3%0.0
PPM1202 (R)1DA10.3%0.0
AVLP209 (R)1GABA10.3%0.0
AN06B009 (R)1GABA10.3%0.0
AMMC011 (L)1ACh10.3%0.0
AN10B017 (L)1ACh10.3%0.0
PLP026 (R)1GABA10.3%0.0
AN07B021 (L)1ACh10.3%0.0
ATL043 (R)1unc10.3%0.0
ATL041 (R)1ACh10.3%0.0
WED092 (R)1ACh10.3%0.0
ATL030 (R)1Glu10.3%0.0
CB2972 (L)1ACh10.3%0.0
WED025 (R)1GABA10.3%0.0
WED143_c (L)2ACh10.3%0.0
PLP025 (R)1GABA10.3%0.0
CB1268 (R)1ACh10.3%0.0
SAD030 (R)2GABA10.3%0.0
PLP101 (R)2ACh10.3%0.0
CB3746 (R)1GABA10.3%0.0
OA-VUMa6 (M)1OA10.3%0.0
5-HTPMPV03 (R)15-HT10.3%0.0
DNg106 (L)2GABA10.3%0.0
PLP052 (R)1ACh0.50.1%0.0
PLP247 (R)1Glu0.50.1%0.0
LAL156_a (R)1ACh0.50.1%0.0
SAD001 (R)1ACh0.50.1%0.0
WED099 (R)1Glu0.50.1%0.0
WED163 (R)1ACh0.50.1%0.0
CB2206 (L)1ACh0.50.1%0.0
CB1493 (R)1ACh0.50.1%0.0
CB2185 (R)1unc0.50.1%0.0
PLP134 (R)1ACh0.50.1%0.0
CB1131 (R)1ACh0.50.1%0.0
LHPV5m1 (R)1ACh0.50.1%0.0
CB2653 (R)1Glu0.50.1%0.0
PLP044 (R)1Glu0.50.1%0.0
M_lvPNm48 (R)1ACh0.50.1%0.0
CB3747 (R)1GABA0.50.1%0.0
LHAV2b1 (R)1ACh0.50.1%0.0
CB2227 (R)1ACh0.50.1%0.0
PLP086 (R)1GABA0.50.1%0.0
LC43 (R)1ACh0.50.1%0.0
DNge089 (L)1ACh0.50.1%0.0
CB1145 (R)1GABA0.50.1%0.0
CB3739 (R)1GABA0.50.1%0.0
LHAV2g5 (R)1ACh0.50.1%0.0
CB3870 (R)1Glu0.50.1%0.0
CB2475 (R)1ACh0.50.1%0.0
WEDPN3 (R)1GABA0.50.1%0.0
DNge111 (R)1ACh0.50.1%0.0
WED056 (R)1GABA0.50.1%0.0
DNg08 (R)1GABA0.50.1%0.0
AMMC017 (L)1ACh0.50.1%0.0
AMMC006 (L)1Glu0.50.1%0.0
ANXXX030 (L)1ACh0.50.1%0.0
CL113 (R)1ACh0.50.1%0.0
SLP248 (R)1Glu0.50.1%0.0
CB4105 (R)1ACh0.50.1%0.0
DNge145 (R)1ACh0.50.1%0.0
PPL203 (R)1unc0.50.1%0.0
WEDPN11 (R)1Glu0.50.1%0.0
ATL030 (L)1Glu0.50.1%0.0
AMMC024 (R)1GABA0.50.1%0.0
PPM1201 (R)1DA0.50.1%0.0
CB4090 (R)1ACh0.50.1%0.0
LHPV6q1 (R)1unc0.50.1%0.0
PPL202 (R)1DA0.50.1%0.0
CB0987 (R)1GABA0.50.1%0.0
WED094 (R)1Glu0.50.1%0.0
CB1533 (L)1ACh0.50.1%0.0
CB3581 (R)1ACh0.50.1%0.0
CB2081_b (R)1ACh0.50.1%0.0
SAD008 (R)1ACh0.50.1%0.0
CB1407 (R)1ACh0.50.1%0.0
CB1030 (R)1ACh0.50.1%0.0
WED004 (R)1ACh0.50.1%0.0
CB4104 (L)1ACh0.50.1%0.0
CB1504 (R)1Glu0.50.1%0.0
LoVP10 (R)1ACh0.50.1%0.0
WED095 (R)1Glu0.50.1%0.0
CB1213 (R)1ACh0.50.1%0.0
CB3738 (R)1GABA0.50.1%0.0
AMMC019 (R)1GABA0.50.1%0.0
CB3745 (R)1GABA0.50.1%0.0
WEDPN8D (R)1ACh0.50.1%0.0
WED093 (R)1ACh0.50.1%0.0
CB1533 (R)1ACh0.50.1%0.0
AN09B060 (L)1ACh0.50.1%0.0
DNg07 (L)1ACh0.50.1%0.0
PLP071 (R)1ACh0.50.1%0.0
LHPV2a1_d (R)1GABA0.50.1%0.0
PLP003 (R)1GABA0.50.1%0.0
AMMC032 (R)1GABA0.50.1%0.0
AOTU043 (R)1ACh0.50.1%0.0
WED201 (R)1GABA0.50.1%0.0
PLP149 (R)1GABA0.50.1%0.0
CB2153 (R)1ACh0.50.1%0.0
PLP116 (R)1Glu0.50.1%0.0
SLP457 (R)1unc0.50.1%0.0
5-HTPMPV01 (L)15-HT0.50.1%0.0
AN19B017 (L)1ACh0.50.1%0.0
SAD112_a (R)1GABA0.50.1%0.0
5-HTPMPV03 (L)15-HT0.50.1%0.0

Outputs

downstream
partner
#NTconns
CB1849
%
Out
CV
PLP116 (R)1Glu29.57.8%0.0
WED025 (R)3GABA256.6%0.2
WED026 (R)3GABA215.6%0.5
ATL041 (R)1ACh174.5%0.0
WED016 (R)1ACh16.54.4%0.0
WED26 (R)2GABA12.53.3%0.5
CB1504 (R)3Glu11.53.1%0.6
WED164 (R)4ACh112.9%0.4
CB3381 (R)1GABA10.52.8%0.0
ATL014 (R)1Glu10.52.8%0.0
PLP044 (R)3Glu10.52.8%0.6
PLP186 (R)2Glu9.52.5%0.8
SAD008 (R)3ACh71.9%0.4
WED143_a (R)4ACh71.9%0.6
IB051 (R)2ACh61.6%0.7
WED129 (R)2ACh61.6%0.7
WEDPN2B_b (R)1GABA5.51.5%0.0
CB2081_a (R)3ACh5.51.5%0.3
WED008 (R)1ACh4.51.2%0.0
LHPV5l1 (R)1ACh4.51.2%0.0
CB1457 (R)2Glu41.1%0.2
PLP086 (R)1GABA41.1%0.0
PLP073 (R)2ACh3.50.9%0.7
PLP056 (R)2ACh3.50.9%0.4
WED128 (R)2ACh3.50.9%0.4
LHAV3e1 (R)1ACh3.50.9%0.0
WED201 (R)3GABA3.50.9%0.5
PLP071 (R)2ACh3.50.9%0.1
CL234 (R)2Glu30.8%0.0
AMMC019 (R)3GABA30.8%0.4
CB4201 (R)2ACh30.8%0.0
CB3739 (R)3GABA30.8%0.4
IB045 (R)1ACh2.50.7%0.0
LHPV4c1_b (R)2Glu2.50.7%0.6
PLP122_b (R)1ACh2.50.7%0.0
CB1541 (R)1ACh2.50.7%0.0
PLP185 (R)1Glu20.5%0.0
WEDPN9 (R)1ACh20.5%0.0
PLP025 (R)1GABA20.5%0.0
PLP053 (R)1ACh20.5%0.0
SMP183 (R)1ACh20.5%0.0
ATL021 (R)1Glu20.5%0.0
SMP369 (R)1ACh1.50.4%0.0
LHCENT4 (R)1Glu1.50.4%0.0
PLP169 (R)1ACh1.50.4%0.0
PLP247 (R)1Glu1.50.4%0.0
LoVP84 (R)1ACh1.50.4%0.0
WEDPN3 (R)1GABA1.50.4%0.0
CB4200 (R)1ACh1.50.4%0.0
CB2873 (R)2Glu1.50.4%0.3
PLP028 (R)2unc1.50.4%0.3
LHAV2g5 (R)2ACh1.50.4%0.3
PLP257 (R)1GABA1.50.4%0.0
WED143_c (R)3ACh1.50.4%0.0
PLP055 (R)2ACh1.50.4%0.3
LHPV5b3 (R)1ACh10.3%0.0
LHPD2a5_b (R)1Glu10.3%0.0
CB3045 (R)1Glu10.3%0.0
PLP087 (R)1GABA10.3%0.0
SMP423 (R)1ACh10.3%0.0
PLP161 (R)1ACh10.3%0.0
PLP052 (R)1ACh10.3%0.0
PLP058 (R)1ACh10.3%0.0
PLP022 (R)1GABA10.3%0.0
PPL203 (R)1unc10.3%0.0
LHCENT10 (R)1GABA10.3%0.0
LAL067 (R)1GABA10.3%0.0
PLP102 (R)1ACh10.3%0.0
CL054 (R)1GABA10.3%0.0
WED035 (R)1Glu10.3%0.0
AMMC021 (R)1GABA10.3%0.0
PS157 (R)1GABA10.3%0.0
SMP388 (R)1ACh10.3%0.0
CB3479 (R)2ACh10.3%0.0
WEDPN6B (R)2GABA10.3%0.0
LHPV3b1_a (R)2ACh10.3%0.0
WED076 (R)1GABA10.3%0.0
WED028 (R)1GABA0.50.1%0.0
SMP390 (R)1ACh0.50.1%0.0
VLP_TBD1 (L)1ACh0.50.1%0.0
SAD082 (R)1ACh0.50.1%0.0
CB2956 (R)1ACh0.50.1%0.0
CB1818 (L)1ACh0.50.1%0.0
CB1585 (R)1ACh0.50.1%0.0
LHPV2c4 (R)1GABA0.50.1%0.0
CB1818 (R)1ACh0.50.1%0.0
PLP054 (R)1ACh0.50.1%0.0
LHPV2c1_a (R)1GABA0.50.1%0.0
SLP314 (R)1Glu0.50.1%0.0
LoVP95 (R)1Glu0.50.1%0.0
PLP103 (R)1ACh0.50.1%0.0
CB1897 (R)1ACh0.50.1%0.0
PLP026 (R)1GABA0.50.1%0.0
CB1300 (R)1ACh0.50.1%0.0
LHPV2e1_a (R)1GABA0.50.1%0.0
CB1023 (R)1Glu0.50.1%0.0
LHPV8c1 (R)1ACh0.50.1%0.0
SMP491 (R)1ACh0.50.1%0.0
PLP188 (R)1ACh0.50.1%0.0
CB0986 (R)1GABA0.50.1%0.0
IB014 (R)1GABA0.50.1%0.0
WED091 (L)1ACh0.50.1%0.0
LHAV2g6 (R)1ACh0.50.1%0.0
CL134 (R)1Glu0.50.1%0.0
CB3614 (R)1ACh0.50.1%0.0
CB1346 (R)1ACh0.50.1%0.0
CL056 (R)1GABA0.50.1%0.0
OA-ASM2 (R)1unc0.50.1%0.0
SAD004 (R)1ACh0.50.1%0.0
PLP009 (R)1Glu0.50.1%0.0
SLP321 (R)1ACh0.50.1%0.0
PLP001 (R)1GABA0.50.1%0.0
WED092 (L)1ACh0.50.1%0.0
WED070 (R)1unc0.50.1%0.0
LHAV2d1 (R)1ACh0.50.1%0.0
AVLP209 (R)1GABA0.50.1%0.0
SLP003 (R)1GABA0.50.1%0.0
LT36 (L)1GABA0.50.1%0.0
ATL001 (R)1Glu0.50.1%0.0
OA-VUMa6 (M)1OA0.50.1%0.0
SAD014 (R)1GABA0.50.1%0.0
CB3741 (R)1GABA0.50.1%0.0
PS126 (L)1ACh0.50.1%0.0
WED093 (L)1ACh0.50.1%0.0
LHPV1c2 (R)1ACh0.50.1%0.0
WED143_c (L)1ACh0.50.1%0.0
WED163 (R)1ACh0.50.1%0.0
WED145 (R)1ACh0.50.1%0.0
CB1980 (R)1ACh0.50.1%0.0
CB2206 (R)1ACh0.50.1%0.0
LoVP5 (R)1ACh0.50.1%0.0
CB3798 (R)1GABA0.50.1%0.0
DNd02 (R)1unc0.50.1%0.0
SMP380 (R)1ACh0.50.1%0.0
WED162 (R)1ACh0.50.1%0.0
CB4112 (R)1Glu0.50.1%0.0
WED030_a (R)1GABA0.50.1%0.0
WEDPN7A (R)1ACh0.50.1%0.0
PS191 (R)1Glu0.50.1%0.0
LoVP94 (R)1Glu0.50.1%0.0
LC40 (R)1ACh0.50.1%0.0
LoVP10 (R)1ACh0.50.1%0.0
WEDPN17_a2 (R)1ACh0.50.1%0.0
LHPV2d1 (R)1GABA0.50.1%0.0
WED079 (R)1GABA0.50.1%0.0
IB015 (R)1ACh0.50.1%0.0
WED056 (R)1GABA0.50.1%0.0
LHPV2a1_d (R)1GABA0.50.1%0.0
PLP142 (R)1GABA0.50.1%0.0
LHPV6l2 (R)1Glu0.50.1%0.0
LoVP45 (R)1Glu0.50.1%0.0
WED092 (R)1ACh0.50.1%0.0
CL022_c (R)1ACh0.50.1%0.0
WED108 (R)1ACh0.50.1%0.0
ATL030 (R)1Glu0.50.1%0.0
LHPV6q1 (R)1unc0.50.1%0.0
AMMC013 (R)1ACh0.50.1%0.0
SAD107 (R)1GABA0.50.1%0.0
DNp73 (R)1ACh0.50.1%0.0