Male CNS – Cell Type Explorer

CB1804(R)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,933
Total Synapses
Post: 1,258 | Pre: 675
log ratio : -0.90
966.5
Mean Synapses
Post: 629 | Pre: 337.5
log ratio : -0.90
ACh(94.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LH(R)85568.0%-1.4631146.1%
SLP(R)36529.0%-0.0335752.9%
AVLP(R)121.0%-inf00.0%
CentralBrain-unspecified100.8%-3.3210.1%
PLP(R)80.6%-inf00.0%
SIP(R)10.1%2.3250.7%
a'L(R)40.3%-inf00.0%
PVLP(R)20.2%-1.0010.1%
Optic-unspecified(R)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1804
%
In
CV
DL5_adPN (R)1ACh55.59.2%0.0
VA1v_adPN (R)4ACh37.56.2%0.4
VA7m_lPN (R)3ACh27.54.6%0.5
mALB1 (L)1GABA26.54.4%0.0
AVLP317 (R)1ACh20.53.4%0.0
LHPD2d2 (R)1Glu183.0%0.0
LHPV12a1 (R)1GABA183.0%0.0
LHAV4b4 (R)3GABA13.52.2%0.2
SLP132 (R)1Glu111.8%0.0
LHPV6p1 (R)1Glu111.8%0.0
LHAV4e4 (R)1unc10.51.7%0.0
CB2480 (R)3GABA9.51.6%0.8
CB1432 (R)3GABA91.5%0.7
AVLP317 (L)1ACh8.51.4%0.0
LHAV4g12 (R)2GABA8.51.4%0.5
DC2_adPN (R)2ACh8.51.4%0.1
CB4117 (R)3GABA81.3%0.5
SMP001 (R)1unc7.51.2%0.0
LHAV4e1_b (R)2unc7.51.2%0.6
VC3_adPN (R)2ACh71.2%0.4
OA-VUMa2 (M)2OA6.51.1%0.7
CB2442 (R)1ACh61.0%0.0
LHPV12a1 (L)1GABA61.0%0.0
AVLP227 (R)2ACh61.0%0.0
VM7d_adPN (R)3ACh61.0%0.4
CB2851 (R)2GABA61.0%0.2
CB2861 (R)1unc5.50.9%0.0
LHCENT3 (R)1GABA50.8%0.0
CSD (L)15-HT50.8%0.0
DP1m_adPN (R)1ACh50.8%0.0
LHAV2b7_a (R)1ACh50.8%0.0
CB3729 (R)2unc50.8%0.4
DC1_adPN (R)1ACh50.8%0.0
LHAV3k1 (R)1ACh4.50.7%0.0
LHPV5e1 (R)1ACh4.50.7%0.0
SLP457 (R)2unc4.50.7%0.1
mALB3 (L)2GABA40.7%0.5
LHAV1d1 (R)2ACh40.7%0.2
PPL201 (R)1DA40.7%0.0
DM2_lPN (R)2ACh40.7%0.0
LHAV7a3 (R)3Glu40.7%0.4
LHPV6q1 (R)1unc3.50.6%0.0
M_VPNml66 (R)2GABA3.50.6%0.4
CB2764 (R)1GABA3.50.6%0.0
LHAV4g13 (R)2GABA3.50.6%0.4
LHAV4b2 (R)1GABA30.5%0.0
SLP305 (R)1ACh30.5%0.0
VA1d_adPN (R)2ACh30.5%0.7
LHPV4b2 (R)2Glu30.5%0.7
CB2831 (R)2GABA30.5%0.3
OA-VPM3 (L)1OA30.5%0.0
CB1687 (R)2Glu30.5%0.7
SLP103 (R)3Glu30.5%0.4
LHAV4a7 (R)3GABA30.5%0.4
CB1619 (R)2GABA30.5%0.7
CB1238 (R)2ACh30.5%0.3
CB1927 (R)1GABA2.50.4%0.0
CB1626 (R)1unc2.50.4%0.0
CB3732 (R)1GABA2.50.4%0.0
LHAV7a4 (R)2Glu2.50.4%0.2
CB1735 (R)2Glu2.50.4%0.2
LHPV4j2 (R)1Glu2.50.4%0.0
VM5d_adPN (R)3ACh2.50.4%0.3
CB2755 (R)1GABA20.3%0.0
LHPD5c1 (R)1Glu20.3%0.0
CB2596 (R)1ACh20.3%0.0
LHAV2c1 (R)2ACh20.3%0.5
LHPV6l1 (R)1Glu20.3%0.0
LHCENT1 (R)1GABA1.50.2%0.0
LHCENT9 (R)1GABA1.50.2%0.0
SLP089 (R)1Glu1.50.2%0.0
LHPV5c2 (R)1ACh1.50.2%0.0
CB2958 (R)1unc1.50.2%0.0
LHAV4e1_a (R)1unc1.50.2%0.0
SLP189 (R)1Glu1.50.2%0.0
LHPV4a5 (R)1Glu1.50.2%0.0
LHPV4b4 (R)2Glu1.50.2%0.3
CB3728 (R)1GABA1.50.2%0.0
DA1_vPN (R)1GABA1.50.2%0.0
VA7l_adPN (R)1ACh1.50.2%0.0
LHPV5h4 (R)2ACh1.50.2%0.3
LHAV2b7_b (R)1ACh1.50.2%0.0
LHPV4b1 (R)2Glu1.50.2%0.3
OA-VPM3 (R)1OA1.50.2%0.0
M_vPNml75 (R)2GABA1.50.2%0.3
CB2678 (R)2GABA1.50.2%0.3
LHAV4g1 (R)3GABA1.50.2%0.0
CB2770 (R)1GABA10.2%0.0
CB1509 (R)1GABA10.2%0.0
VM5v_adPN (R)1ACh10.2%0.0
LHPD4b1 (R)1Glu10.2%0.0
CB3608 (R)1ACh10.2%0.0
LHPV2a4 (R)1GABA10.2%0.0
LHPD4a1 (R)1Glu10.2%0.0
LHAV2b10 (R)1ACh10.2%0.0
SLP137 (R)1Glu10.2%0.0
LHPV4i1 (R)1Glu10.2%0.0
CB3762 (R)1unc10.2%0.0
LHAV5a10_b (R)1ACh10.2%0.0
VL2p_vPN (R)1GABA10.2%0.0
AVLP269_b (R)1ACh10.2%0.0
LHPV4a1 (R)1Glu10.2%0.0
LHAV5d1 (R)1ACh10.2%0.0
VP5+VP3_l2PN (R)1ACh10.2%0.0
CB4165 (L)1ACh10.2%0.0
VL2a_adPN (R)1ACh10.2%0.0
LHPV5b1 (R)2ACh10.2%0.0
SLP443 (R)1Glu10.2%0.0
DM6_adPN (R)2ACh10.2%0.0
CB4115 (R)1Glu10.2%0.0
LHPV5c1_a (R)2ACh10.2%0.0
CB1527 (R)1GABA10.2%0.0
LHAV4a5 (R)2GABA10.2%0.0
CB2802 (R)1ACh10.2%0.0
LHAV4g14 (R)1GABA10.2%0.0
M_vPNml79 (R)1GABA10.2%0.0
VA5_lPN (R)2ACh10.2%0.0
DL1_adPN (R)2ACh10.2%0.0
OA-VPM4 (R)1OA10.2%0.0
DM5_lPN (R)2ACh10.2%0.0
VA6_adPN (R)1ACh0.50.1%0.0
AVLP457 (L)1ACh0.50.1%0.0
LHPV7b1 (R)1ACh0.50.1%0.0
DA4m_adPN (R)1ACh0.50.1%0.0
DA3_adPN (R)1ACh0.50.1%0.0
LHPV5c3 (R)1ACh0.50.1%0.0
CB2589 (R)1GABA0.50.1%0.0
CB3023 (R)1ACh0.50.1%0.0
LHAV5a2_a3 (R)1ACh0.50.1%0.0
PVLP007 (L)1Glu0.50.1%0.0
LHPV4k1 (R)1Glu0.50.1%0.0
LHAV7a7 (R)1Glu0.50.1%0.0
LHAV4a6 (R)1GABA0.50.1%0.0
LHCENT12b (R)1Glu0.50.1%0.0
CB2038 (R)1GABA0.50.1%0.0
CB2064 (R)1Glu0.50.1%0.0
LHAV4a1_a (R)1GABA0.50.1%0.0
CB1200 (R)1ACh0.50.1%0.0
CB2880 (R)1GABA0.50.1%0.0
CB2733 (R)1Glu0.50.1%0.0
M_lPNm11C (R)1ACh0.50.1%0.0
SLP451 (R)1ACh0.50.1%0.0
LHAV2b6 (R)1ACh0.50.1%0.0
SLP227 (R)1ACh0.50.1%0.0
LHAV3e3_b (R)1ACh0.50.1%0.0
CB0650 (L)1Glu0.50.1%0.0
CB1241 (R)1ACh0.50.1%0.0
AVLP225_b1 (R)1ACh0.50.1%0.0
SLP464 (R)1ACh0.50.1%0.0
LHAV3e2 (R)1ACh0.50.1%0.0
WEDPN2A (R)1GABA0.50.1%0.0
CB0650 (R)1Glu0.50.1%0.0
LHAV2b2_c (R)1ACh0.50.1%0.0
VL1_vPN (R)1GABA0.50.1%0.0
WED092 (R)1ACh0.50.1%0.0
LHAV2b2_b (R)1ACh0.50.1%0.0
LHAV4a2 (R)1GABA0.50.1%0.0
LHPV6g1 (R)1Glu0.50.1%0.0
SLP278 (R)1ACh0.50.1%0.0
VM7v_adPN (R)1ACh0.50.1%0.0
SMP457 (R)1ACh0.50.1%0.0
AVLP314 (R)1ACh0.50.1%0.0
SLP056 (R)1GABA0.50.1%0.0
PPL202 (R)1DA0.50.1%0.0
SMP503 (R)1unc0.50.1%0.0
PVLP106 (R)1unc0.50.1%0.0
VA3_adPN (R)1ACh0.50.1%0.0
CB3908 (R)1ACh0.50.1%0.0
CB1590 (R)1Glu0.50.1%0.0
LHAD3b1_a (R)1ACh0.50.1%0.0
mAL4E (L)1Glu0.50.1%0.0
VM6_lvPN (R)1ACh0.50.1%0.0
LHAV4a4 (R)1GABA0.50.1%0.0
SLP308 (R)1Glu0.50.1%0.0
CB1782 (R)1ACh0.50.1%0.0
SLP334 (R)1Glu0.50.1%0.0
CB3393 (R)1Glu0.50.1%0.0
LHAV4d1 (R)1unc0.50.1%0.0
LHAV4g6_a (R)1GABA0.50.1%0.0
CB2143 (L)1ACh0.50.1%0.0
LHPV2e1_a (R)1GABA0.50.1%0.0
SLP188 (R)1Glu0.50.1%0.0
LHAV1a4 (R)1ACh0.50.1%0.0
CB0947 (R)1ACh0.50.1%0.0
LHAV2k11_a (R)1ACh0.50.1%0.0
LHAV2k13 (R)1ACh0.50.1%0.0
CB4132 (R)1ACh0.50.1%0.0
LHPV4l1 (R)1Glu0.50.1%0.0
SLP155 (R)1ACh0.50.1%0.0
AVLP117 (R)1ACh0.50.1%0.0
LH004m (R)1GABA0.50.1%0.0
VA1d_vPN (R)1GABA0.50.1%0.0
LHAV2p1 (R)1ACh0.50.1%0.0
DA1_lPN (R)1ACh0.50.1%0.0
PPM1201 (R)1DA0.50.1%0.0
LHCENT8 (R)1GABA0.50.1%0.0
DNc02 (L)1unc0.50.1%0.0

Outputs

downstream
partner
#NTconns
CB1804
%
Out
CV
LHPV12a1 (R)1GABA44.55.7%0.0
SLP132 (R)1Glu38.55.0%0.0
CB2851 (R)2GABA31.54.1%0.1
LHCENT3 (R)1GABA314.0%0.0
CB4121 (R)4Glu30.53.9%0.5
SLP230 (R)1ACh25.53.3%0.0
CB1263 (R)2ACh253.2%0.2
LHAD3a1 (R)2ACh24.53.2%0.3
LHAV1d2 (R)4ACh233.0%0.5
SLP217 (R)3Glu17.52.3%0.3
OA-VPM3 (L)1OA172.2%0.0
SLP103 (R)3Glu15.52.0%0.8
LHAV4g14 (R)1GABA12.51.6%0.0
LHCENT2 (R)1GABA121.5%0.0
CB3357 (R)2ACh111.4%0.3
CB3729 (R)2unc101.3%0.2
SLP128 (R)3ACh9.51.2%1.0
LHAV4g12 (R)2GABA9.51.2%0.3
CL022_c (R)1ACh91.2%0.0
LHPV12a1 (L)1GABA91.2%0.0
OA-VPM3 (R)1OA91.2%0.0
LHAV3m1 (R)1GABA91.2%0.0
SLP027 (R)2Glu91.2%0.1
CB2861 (R)1unc8.51.1%0.0
CB3519 (R)2ACh81.0%0.5
CB2596 (R)2ACh7.51.0%0.6
CSD (L)15-HT70.9%0.0
CB2688 (R)2ACh70.9%0.0
LHPV5c1_a (R)2ACh6.50.8%0.1
SLP457 (R)2unc6.50.8%0.1
AVLP079 (R)1GABA60.8%0.0
LHAV4b2 (R)2GABA60.8%0.7
LHAV2k13 (R)1ACh60.8%0.0
CB2958 (R)1unc60.8%0.0
LHPD4b1 (R)2Glu60.8%0.0
LHPV5e1 (R)1ACh5.50.7%0.0
CB3507 (R)1ACh5.50.7%0.0
SLP011 (R)1Glu5.50.7%0.0
LHAV4e4 (R)1unc50.6%0.0
CB2467 (R)1ACh50.6%0.0
SMP105_b (R)2Glu4.50.6%0.1
LHPV2b5 (R)2GABA4.50.6%0.6
LHCENT9 (R)1GABA40.5%0.0
AVLP317 (R)1ACh40.5%0.0
LHAV4b4 (R)2GABA40.5%0.8
LHAD1k1 (R)1ACh40.5%0.0
CB4141 (R)2ACh40.5%0.0
LHAV3a1_b (R)2ACh40.5%0.2
LHAV6b4 (R)1ACh3.50.5%0.0
SLP189 (R)1Glu3.50.5%0.0
LHPD2d2 (R)1Glu3.50.5%0.0
MBON24 (R)1ACh3.50.5%0.0
LHAD1i1 (R)2ACh3.50.5%0.4
CB0947 (R)2ACh3.50.5%0.7
SLP212 (R)2ACh3.50.5%0.4
LHAD2c3 (R)2ACh3.50.5%0.1
CB1701 (R)1GABA30.4%0.0
LHAV2b7_a (R)1ACh30.4%0.0
LHAD1b2_d (R)1ACh30.4%0.0
LHPV5b1 (R)1ACh30.4%0.0
CB2226 (R)1ACh30.4%0.0
LHAV2k11_a (R)1ACh30.4%0.0
AVLP215 (R)1GABA30.4%0.0
LHAV4e1_b (R)2unc30.4%0.7
PPL201 (R)1DA30.4%0.0
OA-VUMa2 (M)2OA30.4%0.3
LHAV4b1 (R)1GABA2.50.3%0.0
LHAV2c1 (R)1ACh2.50.3%0.0
CB2667 (R)1ACh2.50.3%0.0
LHAV2k12_a (R)2ACh2.50.3%0.6
CB2133 (R)2ACh2.50.3%0.6
CB2714 (R)1ACh2.50.3%0.0
SMP457 (R)1ACh2.50.3%0.0
CL022_a (R)1ACh20.3%0.0
LHAV7a7 (R)1Glu20.3%0.0
CB3869 (R)1ACh20.3%0.0
LHPD2d1 (R)1Glu20.3%0.0
LHPV5b6 (R)1ACh20.3%0.0
CB3545 (R)1ACh20.3%0.0
SLP451 (R)2ACh20.3%0.5
SLP004 (R)1GABA20.3%0.0
LHAV1d1 (R)2ACh20.3%0.0
LHAV2f2_b (R)2GABA20.3%0.5
PAM10 (R)3DA20.3%0.4
LHPV4i3 (R)2Glu20.3%0.0
SLP217 (L)2Glu20.3%0.0
LHAV2b6 (R)2ACh20.3%0.0
CB1608 (R)1Glu1.50.2%0.0
LHAV4a7 (R)1GABA1.50.2%0.0
SMP031 (R)1ACh1.50.2%0.0
CB3185 (R)1Glu1.50.2%0.0
CB1238 (R)1ACh1.50.2%0.0
LHAV1a1 (R)1ACh1.50.2%0.0
SLP411 (R)1Glu1.50.2%0.0
CB3608 (R)1ACh1.50.2%0.0
LHPV5a3 (R)1ACh1.50.2%0.0
SLP311 (R)1Glu1.50.2%0.0
LHAV6b1 (R)1ACh1.50.2%0.0
SLP305 (R)1ACh1.50.2%0.0
LHCENT12b (R)2Glu1.50.2%0.3
CB2770 (R)2GABA1.50.2%0.3
LHAV2a2 (R)2ACh1.50.2%0.3
LHPV2a1_a (R)2GABA1.50.2%0.3
CB1241 (R)1ACh1.50.2%0.0
LHAD1d1 (R)2ACh1.50.2%0.3
AVLP317 (L)1ACh1.50.2%0.0
AVLP751m (R)1ACh1.50.2%0.0
CB3464 (R)3Glu1.50.2%0.0
DL5_adPN (R)1ACh10.1%0.0
LHCENT4 (R)1Glu10.1%0.0
LHPV5a2 (R)1ACh10.1%0.0
LHPV2b3 (R)1GABA10.1%0.0
CB2398 (R)1ACh10.1%0.0
M_vPNml73 (R)1GABA10.1%0.0
CB1570 (R)1ACh10.1%0.0
LHAV4g1 (R)1GABA10.1%0.0
AVLP227 (R)1ACh10.1%0.0
LHAV2g2_b (R)1ACh10.1%0.0
LHPV4j2 (R)1Glu10.1%0.0
LHPV4l1 (R)1Glu10.1%0.0
CL022_b (R)1ACh10.1%0.0
LHAV3k1 (R)1ACh10.1%0.0
SLP057 (R)1GABA10.1%0.0
LHCENT1 (R)1GABA10.1%0.0
AVLP314 (R)1ACh10.1%0.0
SMP001 (R)1unc10.1%0.0
AVLP110_a (R)1ACh10.1%0.0
SIP076 (R)1ACh10.1%0.0
LHAD3b1_a (R)1ACh10.1%0.0
LHAD1b5 (R)1ACh10.1%0.0
CB3016 (R)1GABA10.1%0.0
SLP085 (R)1Glu10.1%0.0
SLP015_c (R)1Glu10.1%0.0
CB3023 (R)1ACh10.1%0.0
CB1352 (R)1Glu10.1%0.0
SMP038 (R)1Glu10.1%0.0
AVLP314 (L)1ACh10.1%0.0
LHPD4a1 (R)2Glu10.1%0.0
LHPD3a2_a (R)2Glu10.1%0.0
CB2812 (R)2GABA10.1%0.0
SLP421 (R)2ACh10.1%0.0
LHAV4d1 (R)2unc10.1%0.0
CB1200 (R)1ACh10.1%0.0
CB2831 (R)1GABA10.1%0.0
DC1_adPN (R)1ACh10.1%0.0
PAM04 (R)1DA0.50.1%0.0
VA6_adPN (R)1ACh0.50.1%0.0
SLP259 (R)1Glu0.50.1%0.0
CB2089 (R)1ACh0.50.1%0.0
LHPD2a5_b (R)1Glu0.50.1%0.0
LHAV3e6 (R)1ACh0.50.1%0.0
CB2687 (R)1ACh0.50.1%0.0
CB1246 (R)1GABA0.50.1%0.0
CB2480 (R)1GABA0.50.1%0.0
SLP150 (R)1ACh0.50.1%0.0
CB3393 (R)1Glu0.50.1%0.0
CB1619 (R)1GABA0.50.1%0.0
CB2764 (R)1GABA0.50.1%0.0
LHPV6f5 (R)1ACh0.50.1%0.0
LHAV1d2 (L)1ACh0.50.1%0.0
LHPV4b4 (R)1Glu0.50.1%0.0
CB2678 (R)1GABA0.50.1%0.0
LHAV2b7_b (R)1ACh0.50.1%0.0
SLP118 (R)1ACh0.50.1%0.0
LHAV2b11 (R)1ACh0.50.1%0.0
LHAV3e4_a (R)1ACh0.50.1%0.0
LHAV5b2 (R)1ACh0.50.1%0.0
VM4_lvPN (R)1ACh0.50.1%0.0
LHPV6l1 (R)1Glu0.50.1%0.0
SMP043 (R)1Glu0.50.1%0.0
LHPV7a1 (R)1ACh0.50.1%0.0
CB1405 (R)1Glu0.50.1%0.0
LHAV2b2_a (R)1ACh0.50.1%0.0
PVLP214m (R)1ACh0.50.1%0.0
SLP381 (R)1Glu0.50.1%0.0
AVLP038 (R)1ACh0.50.1%0.0
SLP470 (R)1ACh0.50.1%0.0
LHAV2d1 (R)1ACh0.50.1%0.0
M_imPNl92 (L)1ACh0.50.1%0.0
DC2_adPN (R)1ACh0.50.1%0.0
LHPV10c1 (R)1GABA0.50.1%0.0
DM5_lPN (R)1ACh0.50.1%0.0
LHPD4d2_b (R)1Glu0.50.1%0.0
LHAV5a2_a1 (R)1ACh0.50.1%0.0
CB3874 (L)1ACh0.50.1%0.0
mAL4E (L)1Glu0.50.1%0.0
CB4122 (R)1Glu0.50.1%0.0
CB4088 (R)1ACh0.50.1%0.0
LHPV4c2 (R)1Glu0.50.1%0.0
CB3142 (R)1ACh0.50.1%0.0
SLP275 (R)1ACh0.50.1%0.0
LHAV2g3 (R)1ACh0.50.1%0.0
CB1626 (R)1unc0.50.1%0.0
LHAV2e4_b (R)1ACh0.50.1%0.0
LHPD2a2 (R)1ACh0.50.1%0.0
CB3874 (R)1ACh0.50.1%0.0
LHAV3b13 (R)1ACh0.50.1%0.0
LHAV3e3_b (R)1ACh0.50.1%0.0
CB2087 (R)1unc0.50.1%0.0
CB3697 (R)1ACh0.50.1%0.0
LHAV2k9 (R)1ACh0.50.1%0.0
SLP157 (R)1ACh0.50.1%0.0
LH002m (R)1ACh0.50.1%0.0
SLP048 (R)1ACh0.50.1%0.0
SLP155 (R)1ACh0.50.1%0.0
LHAV4a2 (R)1GABA0.50.1%0.0
VC3_adPN (R)1ACh0.50.1%0.0
DSKMP3 (R)1unc0.50.1%0.0