Male CNS – Cell Type Explorer

CB1787(R)

3
Total Neurons
Right: 1 | Left: 2
log ratio : 1.00
1,076
Total Synapses
Post: 741 | Pre: 335
log ratio : -1.15
1,076
Mean Synapses
Post: 741 | Pre: 335
log ratio : -1.15
ACh(94.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (13 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SPS(L)12917.4%0.1314142.1%
SPS(R)15420.8%-inf00.0%
ICL(R)14018.9%-3.43133.9%
CAN(L)658.8%0.428726.0%
CentralBrain-unspecified547.3%-1.17247.2%
PLP(R)7810.5%-inf00.0%
SAD152.0%1.183410.1%
GOR(R)415.5%-inf00.0%
VES(L)162.2%0.64257.5%
SCL(R)192.6%-4.2510.3%
GNG91.2%0.15103.0%
IB141.9%-inf00.0%
SMP(R)70.9%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1787
%
In
CV
aMe_TBD1 (R)1GABA659.2%0.0
PLP217 (R)1ACh527.4%0.0
MeVP26 (R)1Glu507.1%0.0
CB4072 (L)7ACh334.7%0.9
GNG385 (R)2GABA263.7%0.1
aMe_TBD1 (L)1GABA253.6%0.0
MeVP23 (R)1Glu223.1%0.0
CL335 (L)1ACh213.0%0.0
AN27X016 (L)1Glu142.0%0.0
AN27X016 (R)1Glu121.7%0.0
AMMC017 (L)2ACh121.7%0.5
PS260 (R)2ACh121.7%0.3
CL335 (R)1ACh111.6%0.0
CL053 (L)1ACh111.6%0.0
SMP048 (R)1ACh91.3%0.0
IB038 (L)2Glu91.3%0.1
CB4072 (R)3ACh81.1%0.5
AMMC016 (L)2ACh81.1%0.0
PS307 (L)1Glu71.0%0.0
CB0734 (R)2ACh71.0%0.4
CL273 (R)2ACh71.0%0.4
MeVP24 (R)1ACh60.9%0.0
PS188 (R)2Glu60.9%0.7
SMP489 (L)2ACh60.9%0.3
GNG385 (L)1GABA50.7%0.0
CB2646 (R)1ACh50.7%0.0
LC23 (R)1ACh50.7%0.0
PS274 (R)1ACh50.7%0.0
DNge135 (R)1GABA50.7%0.0
DNg27 (L)1Glu50.7%0.0
CL235 (L)2Glu50.7%0.6
AOTU008 (L)3ACh50.7%0.3
AN27X011 (R)1ACh40.6%0.0
AN19B019 (L)1ACh40.6%0.0
WED210 (L)1ACh40.6%0.0
PLP245 (L)1ACh40.6%0.0
CL158 (R)1ACh40.6%0.0
SAD010 (R)1ACh40.6%0.0
PS058 (R)1ACh40.6%0.0
LAL190 (R)1ACh40.6%0.0
GNG282 (R)1ACh40.6%0.0
PLP032 (L)1ACh40.6%0.0
AVLP280 (R)1ACh40.6%0.0
PLP150 (R)2ACh40.6%0.5
PLP150 (L)3ACh40.6%0.4
OA-VUMa4 (M)2OA40.6%0.0
SMP048 (L)1ACh30.4%0.0
VES200m (L)1Glu30.4%0.0
PS267 (L)1ACh30.4%0.0
AN27X015 (R)1Glu30.4%0.0
CB3132 (R)1ACh30.4%0.0
SMP021 (R)1ACh30.4%0.0
CL053 (R)1ACh30.4%0.0
CB1958 (R)2Glu30.4%0.3
AOTU008 (R)2ACh30.4%0.3
AN27X009 (L)1ACh20.3%0.0
PS108 (R)1Glu20.3%0.0
LAL130 (R)1ACh20.3%0.0
LAL130 (L)1ACh20.3%0.0
CL186 (R)1Glu20.3%0.0
PS149 (R)1Glu20.3%0.0
PS032 (L)1ACh20.3%0.0
CL184 (R)1Glu20.3%0.0
AVLP486 (R)1GABA20.3%0.0
PLP075 (R)1GABA20.3%0.0
CL131 (L)1ACh20.3%0.0
PLP134 (L)1ACh20.3%0.0
CL090_e (R)1ACh20.3%0.0
SMP451 (R)1Glu20.3%0.0
DNpe010 (R)1Glu20.3%0.0
LoVP50 (R)1ACh20.3%0.0
LPLC_unclear (R)1ACh20.3%0.0
SIP132m (R)1ACh20.3%0.0
PLP229 (R)1ACh20.3%0.0
PLP245 (R)1ACh20.3%0.0
CL066 (R)1GABA20.3%0.0
LAL190 (L)1ACh20.3%0.0
VES045 (R)1GABA20.3%0.0
LoVC20 (L)1GABA20.3%0.0
AVLP531 (R)1GABA20.3%0.0
WED184 (L)1GABA20.3%0.0
AN19B019 (R)1ACh20.3%0.0
DNp10 (L)1ACh20.3%0.0
5-HTPMPV03 (L)15-HT20.3%0.0
CL001 (R)1Glu20.3%0.0
PS164 (L)2GABA20.3%0.0
CB4073 (L)2ACh20.3%0.0
PVLP100 (R)2GABA20.3%0.0
DNpe005 (R)1ACh10.1%0.0
PS306 (L)1GABA10.1%0.0
CL336 (L)1ACh10.1%0.0
PS146 (R)1Glu10.1%0.0
mALB5 (L)1GABA10.1%0.0
WED184 (R)1GABA10.1%0.0
AN10B005 (L)1ACh10.1%0.0
CRE075 (R)1Glu10.1%0.0
CL308 (R)1ACh10.1%0.0
SMP593 (L)1GABA10.1%0.0
PRW012 (R)1ACh10.1%0.0
PS274 (L)1ACh10.1%0.0
CL339 (R)1ACh10.1%0.0
CL185 (R)1Glu10.1%0.0
GNG282 (L)1ACh10.1%0.0
PLP218 (R)1Glu10.1%0.0
CL011 (R)1Glu10.1%0.0
PS008_a1 (R)1Glu10.1%0.0
CB3332 (R)1ACh10.1%0.0
OA-VPM3 (L)1OA10.1%0.0
PS008_a3 (R)1Glu10.1%0.0
PS033_b (L)1ACh10.1%0.0
CL235 (R)1Glu10.1%0.0
ICL006m (L)1Glu10.1%0.0
AMMC017 (R)1ACh10.1%0.0
CL022_b (L)1ACh10.1%0.0
SIP020b (R)1Glu10.1%0.0
CB2300 (R)1ACh10.1%0.0
CB1260 (L)1ACh10.1%0.0
CL167 (R)1ACh10.1%0.0
IB038 (R)1Glu10.1%0.0
PS110 (R)1ACh10.1%0.0
SIP024 (L)1ACh10.1%0.0
PLP055 (R)1ACh10.1%0.0
CB3931 (R)1ACh10.1%0.0
CL323 (R)1ACh10.1%0.0
AMMC025 (L)1GABA10.1%0.0
CB3906 (R)1ACh10.1%0.0
LT35 (R)1GABA10.1%0.0
LC35b (R)1ACh10.1%0.0
CL269 (R)1ACh10.1%0.0
CL168 (R)1ACh10.1%0.0
AMMC036 (L)1ACh10.1%0.0
PS029 (R)1ACh10.1%0.0
PS249 (L)1ACh10.1%0.0
PLP231 (R)1ACh10.1%0.0
DNpe037 (R)1ACh10.1%0.0
DNg03 (R)1ACh10.1%0.0
LoVP18 (R)1ACh10.1%0.0
IB051 (R)1ACh10.1%0.0
LC23 (L)1ACh10.1%0.0
SMP546 (R)1ACh10.1%0.0
OCC01b (L)1ACh10.1%0.0
CL216 (L)1ACh10.1%0.0
OCG06 (L)1ACh10.1%0.0
CL022_c (R)1ACh10.1%0.0
CL155 (R)1ACh10.1%0.0
CL287 (R)1GABA10.1%0.0
PLP209 (R)1ACh10.1%0.0
PVLP149 (R)1ACh10.1%0.0
CL339 (L)1ACh10.1%0.0
MeVPLo1 (R)1Glu10.1%0.0
DNg27 (R)1Glu10.1%0.0
PS307 (R)1Glu10.1%0.0
PS112 (R)1Glu10.1%0.0
DNp54 (R)1GABA10.1%0.0
VES045 (L)1GABA10.1%0.0
GNG121 (L)1GABA10.1%0.0
MeVP51 (R)1Glu10.1%0.0
DNae009 (R)1ACh10.1%0.0
aMe17c (R)1Glu10.1%0.0
LoVC22 (R)1DA10.1%0.0
DNp10 (R)1ACh10.1%0.0
PPL202 (R)1DA10.1%0.0
CL366 (R)1GABA10.1%0.0
5-HTPMPV03 (R)15-HT10.1%0.0

Outputs

downstream
partner
#NTconns
CB1787
%
Out
CV
PS306 (L)1GABA21721.7%0.0
PS355 (L)1GABA545.4%0.0
VES041 (L)1GABA454.5%0.0
SMP593 (L)1GABA434.3%0.0
CL366 (L)1GABA424.2%0.0
DNpe020 (M)2ACh414.1%0.1
PS356 (L)2GABA373.7%0.2
aMe_TBD1 (R)1GABA333.3%0.0
CB0609 (L)1GABA282.8%0.0
PS336 (L)2Glu242.4%0.2
aMe_TBD1 (L)1GABA202.0%0.0
DNge135 (R)1GABA151.5%0.0
PS307 (L)1Glu151.5%0.0
CB2620 (L)1GABA131.3%0.0
AN27X016 (R)1Glu131.3%0.0
AN27X016 (L)1Glu121.2%0.0
CB0609 (R)1GABA121.2%0.0
DNpe053 (L)1ACh121.2%0.0
DNge073 (L)1ACh111.1%0.0
GNG107 (R)1GABA111.1%0.0
PS260 (R)2ACh101.0%0.4
GNG290 (L)1GABA90.9%0.0
DNge079 (L)1GABA80.8%0.0
MeVC4a (L)1ACh80.8%0.0
MeVC11 (R)1ACh80.8%0.0
IbSpsP (L)3ACh80.8%0.9
DNge082 (L)1ACh70.7%0.0
PS307 (R)1Glu70.7%0.0
MeVC11 (L)1ACh70.7%0.0
GNG333 (L)1ACh60.6%0.0
PS249 (L)1ACh60.6%0.0
DNp68 (L)1ACh60.6%0.0
DNp68 (R)1ACh60.6%0.0
CL053 (R)1ACh60.6%0.0
GNG331 (R)1ACh50.5%0.0
DNpe053 (R)1ACh50.5%0.0
OCC01b (L)1ACh50.5%0.0
AN27X015 (L)1Glu50.5%0.0
CL213 (L)1ACh50.5%0.0
SMP543 (L)1GABA50.5%0.0
GNG404 (L)1Glu50.5%0.0
DNg74_a (L)1GABA50.5%0.0
PS005_d (L)1Glu40.4%0.0
CB2620 (R)1GABA40.4%0.0
GNG404 (R)1Glu40.4%0.0
PVLP201m_d (L)1ACh40.4%0.0
ExR3 (L)15-HT40.4%0.0
DNp63 (L)1ACh40.4%0.0
MeVC4a (R)1ACh40.4%0.0
CL323 (R)2ACh40.4%0.0
GNG282 (L)1ACh30.3%0.0
PS202 (L)1ACh30.3%0.0
PS008_a1 (R)1Glu30.3%0.0
CB0079 (L)1GABA30.3%0.0
DNp46 (R)1ACh30.3%0.0
MeVPLo1 (R)1Glu30.3%0.0
DNb07 (L)1Glu30.3%0.0
DNge050 (L)1ACh30.3%0.0
OA-AL2i1 (R)1unc30.3%0.0
GNG563 (L)1ACh20.2%0.0
CL335 (R)1ACh20.2%0.0
DNge050 (R)1ACh20.2%0.0
IB026 (L)1Glu20.2%0.0
CB3394 (L)1GABA20.2%0.0
ICL005m (R)1Glu20.2%0.0
GNG572 (L)1unc20.2%0.0
DNb07 (R)1Glu20.2%0.0
DNge073 (R)1ACh20.2%0.0
GNG160 (L)1Glu20.2%0.0
GNG105 (L)1ACh20.2%0.0
DNp47 (R)1ACh20.2%0.0
GNG104 (L)1ACh20.2%0.0
oviIN (L)1GABA20.2%0.0
PS097 (L)2GABA20.2%0.0
PS096 (L)2GABA20.2%0.0
OA-AL2i2 (L)2OA20.2%0.0
AN27X009 (L)1ACh10.1%0.0
AN27X011 (R)1ACh10.1%0.0
AN27X011 (L)1ACh10.1%0.0
GNG561 (L)1Glu10.1%0.0
DNge079 (R)1GABA10.1%0.0
PS108 (R)1Glu10.1%0.0
IB060 (L)1GABA10.1%0.0
GNG331 (L)1ACh10.1%0.0
PLP074 (R)1GABA10.1%0.0
PS181 (L)1ACh10.1%0.0
CL339 (R)1ACh10.1%0.0
PS274 (L)1ACh10.1%0.0
AOTU008 (L)1ACh10.1%0.0
ExR3 (R)15-HT10.1%0.0
DNa06 (L)1ACh10.1%0.0
PS004 (L)1Glu10.1%0.0
PS008_a4 (L)1Glu10.1%0.0
CB1833 (R)1Glu10.1%0.0
PS008_a3 (L)1Glu10.1%0.0
PS008_a3 (R)1Glu10.1%0.0
PS005_d (R)1Glu10.1%0.0
PS005_c (L)1Glu10.1%0.0
ICL005m (L)1Glu10.1%0.0
PS004 (R)1Glu10.1%0.0
IB038 (R)1Glu10.1%0.0
CB2646 (R)1ACh10.1%0.0
DNg03 (L)1ACh10.1%0.0
ICL006m (R)1Glu10.1%0.0
CL199 (R)1ACh10.1%0.0
PS032 (L)1ACh10.1%0.0
PS110 (R)1ACh10.1%0.0
DNg02_b (L)1ACh10.1%0.0
PS140 (L)1Glu10.1%0.0
AMMC025 (L)1GABA10.1%0.0
CL168 (R)1ACh10.1%0.0
PS108 (L)1Glu10.1%0.0
DNpe040 (R)1ACh10.1%0.0
CL121_b (L)1GABA10.1%0.0
OCG06 (L)1ACh10.1%0.0
PS091 (R)1GABA10.1%0.0
PVLP203m (L)1ACh10.1%0.0
PS137 (L)1Glu10.1%0.0
DNpe026 (R)1ACh10.1%0.0
PS001 (R)1GABA10.1%0.0
GNG166 (L)1Glu10.1%0.0
PS274 (R)1ACh10.1%0.0
DNge099 (L)1Glu10.1%0.0
LAL304m (R)1ACh10.1%0.0
DNp104 (L)1ACh10.1%0.0
PLP211 (R)1unc10.1%0.0
DNp54 (R)1GABA10.1%0.0
CL286 (R)1ACh10.1%0.0
DNp48 (R)1ACh10.1%0.0
OA-VUMa4 (M)1OA10.1%0.0
LT35 (L)1GABA10.1%0.0
DNp09 (L)1ACh10.1%0.0
PS088 (L)1GABA10.1%0.0
OA-AL2i4 (L)1OA10.1%0.0
DNp13 (R)1ACh10.1%0.0
DNp63 (R)1ACh10.1%0.0
MeVC4b (L)1ACh10.1%0.0
OA-AL2i3 (L)1OA10.1%0.0
PS124 (L)1ACh10.1%0.0
5-HTPMPV03 (R)15-HT10.1%0.0
OA-AL2i1 (L)1unc10.1%0.0