Male CNS – Cell Type Explorer

CB1648(R)

1
Total Neurons
Right: 1 | Left: 0
log ratio : -inf
340
Total Synapses
Post: 199 | Pre: 141
log ratio : -0.50
340
Mean Synapses
Post: 199 | Pre: 141
log ratio : -0.50
Glu(85.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
IB4221.1%1.129164.5%
ICL(R)11256.3%-3.00149.9%
SCL(R)3819.1%-1.93107.1%
ATL(R)31.5%1.74107.1%
ATL(L)10.5%3.32107.1%
CentralBrain-unspecified31.5%1.0064.3%

Connectivity

Inputs

upstream
partner
#NTconns
CB1648
%
In
CV
CL287 (R)1GABA179.0%0.0
SMP069 (R)2Glu157.9%0.3
PLP199 (R)2GABA115.8%0.5
CB3044 (L)1ACh63.2%0.0
CL135 (L)1ACh63.2%0.0
CL090_d (R)2ACh63.2%0.3
SMP050 (R)1GABA52.6%0.0
MeVP36 (R)1ACh52.6%0.0
CL135 (R)1ACh52.6%0.0
CL154 (R)1Glu42.1%0.0
CL235 (R)1Glu42.1%0.0
LoVCLo2 (L)1unc42.1%0.0
PLP150 (R)2ACh42.1%0.5
CL086_a (R)2ACh42.1%0.5
SMP020 (L)1ACh31.6%0.0
PLP150 (L)1ACh31.6%0.0
SLP076 (R)1Glu31.6%0.0
LT69 (R)1ACh31.6%0.0
IB004_a (R)2Glu31.6%0.3
CL091 (R)2ACh31.6%0.3
OA-VUMa3 (M)2OA31.6%0.3
CL353 (R)1Glu21.1%0.0
CL234 (R)1Glu21.1%0.0
SMP091 (R)1GABA21.1%0.0
SMP077 (R)1GABA21.1%0.0
CB2931 (R)1Glu21.1%0.0
LoVP3 (R)1Glu21.1%0.0
SMP020 (R)1ACh21.1%0.0
PLP189 (R)1ACh21.1%0.0
CL175 (R)1Glu21.1%0.0
CL288 (R)1GABA21.1%0.0
VES075 (L)1ACh21.1%0.0
IB004_a (L)2Glu21.1%0.0
CL182 (R)2Glu21.1%0.0
PVLP109 (R)1ACh10.5%0.0
CB1975 (L)1Glu10.5%0.0
CB1072 (L)1ACh10.5%0.0
LoVC2 (R)1GABA10.5%0.0
CL011 (R)1Glu10.5%0.0
AOTU011 (R)1Glu10.5%0.0
CB4069 (L)1ACh10.5%0.0
SMP021 (L)1ACh10.5%0.0
CL189 (R)1Glu10.5%0.0
SMP019 (L)1ACh10.5%0.0
PLP154 (L)1ACh10.5%0.0
PLP054 (R)1ACh10.5%0.0
LC46b (R)1ACh10.5%0.0
CB2896 (L)1ACh10.5%0.0
CB4071 (R)1ACh10.5%0.0
SMP459 (R)1ACh10.5%0.0
CB2896 (R)1ACh10.5%0.0
SMP459 (L)1ACh10.5%0.0
LC36 (L)1ACh10.5%0.0
CL004 (R)1Glu10.5%0.0
PLP055 (R)1ACh10.5%0.0
CL090_c (R)1ACh10.5%0.0
LoVP32 (L)1ACh10.5%0.0
CL089_a2 (R)1ACh10.5%0.0
CL089_c (R)1ACh10.5%0.0
SMP066 (R)1Glu10.5%0.0
CL089_a1 (R)1ACh10.5%0.0
CL280 (R)1ACh10.5%0.0
IB042 (R)1Glu10.5%0.0
CL086_b (R)1ACh10.5%0.0
CL141 (R)1Glu10.5%0.0
CL086_e (R)1ACh10.5%0.0
LoVP32 (R)1ACh10.5%0.0
CL088_b (R)1ACh10.5%0.0
CL180 (R)1Glu10.5%0.0
SIP031 (R)1ACh10.5%0.0
SMP143 (L)1unc10.5%0.0
PS158 (R)1ACh10.5%0.0
PS002 (L)1GABA10.5%0.0
CL075_b (L)1ACh10.5%0.0
PLP177 (R)1ACh10.5%0.0
PLP093 (R)1ACh10.5%0.0
PLP216 (L)1GABA10.5%0.0
AN10B005 (R)1ACh10.5%0.0
LoVC1 (L)1Glu10.5%0.0
GNG302 (L)1GABA10.5%0.0

Outputs

downstream
partner
#NTconns
CB1648
%
Out
CV
LoVC2 (L)1GABA4110.3%0.0
LoVC2 (R)1GABA379.3%0.0
IB032 (R)4Glu225.5%0.8
LoVC1 (L)1Glu215.3%0.0
IB109 (L)1Glu205.0%0.0
AOTU011 (R)2Glu184.5%0.6
IB109 (R)1Glu153.8%0.0
IB032 (L)3Glu153.8%0.3
AOTU035 (R)1Glu112.8%0.0
AOTU035 (L)1Glu102.5%0.0
CB2896 (L)3ACh102.5%0.1
DNpe001 (R)1ACh92.3%0.0
DNpe001 (L)1ACh82.0%0.0
LoVC1 (R)1Glu82.0%0.0
CB2896 (R)3ACh82.0%0.5
DNa09 (R)1ACh71.8%0.0
AOTU064 (L)1GABA61.5%0.0
PLP032 (R)1ACh51.3%0.0
IB004_a (R)3Glu51.3%0.6
CB4073 (R)1ACh41.0%0.0
PLP208 (R)1ACh41.0%0.0
CB1222 (L)1ACh30.8%0.0
LAL006 (L)1ACh30.8%0.0
SMP459 (L)1ACh30.8%0.0
IB017 (R)1ACh30.8%0.0
LoVC17 (L)1GABA30.8%0.0
LoVP32 (R)1ACh30.8%0.0
CL074 (R)1ACh30.8%0.0
LoVC15 (R)1GABA30.8%0.0
CL031 (R)1Glu30.8%0.0
IB009 (L)1GABA30.8%0.0
DNpe055 (L)1ACh30.8%0.0
DNpe055 (R)1ACh30.8%0.0
LoVC4 (L)1GABA30.8%0.0
CB4010 (R)2ACh30.8%0.3
CL091 (R)2ACh30.8%0.3
IB004_a (L)3Glu30.8%0.0
CB1851 (R)3Glu30.8%0.0
IB004_b (R)1Glu20.5%0.0
CL182 (R)1Glu20.5%0.0
IB060 (L)1GABA20.5%0.0
LoVC7 (R)1GABA20.5%0.0
DNa09 (L)1ACh20.5%0.0
CB1353 (L)1Glu20.5%0.0
CB2737 (L)1ACh20.5%0.0
CL189 (R)1Glu20.5%0.0
CB1547 (L)1ACh20.5%0.0
CL180 (R)1Glu20.5%0.0
LoVC17 (R)1GABA20.5%0.0
CL321 (R)1ACh20.5%0.0
CL287 (R)1GABA20.5%0.0
IB093 (L)1Glu20.5%0.0
VES075 (L)1ACh20.5%0.0
VES075 (R)1ACh20.5%0.0
LoVC12 (L)1GABA20.5%0.0
LAL141 (L)1ACh10.3%0.0
LAL134 (L)1GABA10.3%0.0
LoVC15 (L)1GABA10.3%0.0
SMP445 (R)1Glu10.3%0.0
PLP199 (R)1GABA10.3%0.0
PS158 (L)1ACh10.3%0.0
CB4010 (L)1ACh10.3%0.0
CB1975 (L)1Glu10.3%0.0
CB1420 (L)1Glu10.3%0.0
CB2300 (L)1ACh10.3%0.0
CRE108 (L)1ACh10.3%0.0
CB2611 (R)1Glu10.3%0.0
CB2300 (R)1ACh10.3%0.0
CL170 (R)1ACh10.3%0.0
CB0976 (R)1Glu10.3%0.0
CB2439 (R)1ACh10.3%0.0
CB1547 (R)1ACh10.3%0.0
LoVP32 (L)1ACh10.3%0.0
CL254 (R)1ACh10.3%0.0
SMP542 (R)1Glu10.3%0.0
PS139 (R)1Glu10.3%0.0
SLP074 (R)1ACh10.3%0.0
CL175 (R)1Glu10.3%0.0
SIP017 (L)1Glu10.3%0.0
PS002 (L)1GABA10.3%0.0
SMP516 (R)1ACh10.3%0.0
SMP370 (L)1Glu10.3%0.0
LoVCLo1 (R)1ACh10.3%0.0
oviIN (R)1GABA10.3%0.0