Male CNS – Cell Type Explorer

CB1641(L)

5
Total Neurons
Right: 3 | Left: 2
log ratio : -0.58
1,045
Total Synapses
Post: 683 | Pre: 362
log ratio : -0.92
522.5
Mean Synapses
Post: 341.5 | Pre: 181
log ratio : -0.92
Glu(80.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SPS(R)15522.7%0.3619955.0%
IB11416.7%0.4615743.4%
SPS(L)23935.0%-5.5851.4%
IPS(L)13419.6%-inf00.0%
CentralBrain-unspecified284.1%-4.8110.3%
PLP(L)81.2%-inf00.0%
WED(L)50.7%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1641
%
In
CV
PS063 (R)1GABA7522.5%0.0
MeVP59 (L)2ACh13.54.1%0.6
PLP143 (R)1GABA123.6%0.0
AN04B003 (L)2ACh10.53.2%0.0
ANXXX094 (R)1ACh103.0%0.0
MeVP6 (L)8Glu103.0%0.8
AN04B023 (L)3ACh92.7%0.7
PS280 (R)1Glu8.52.6%0.0
CB0194 (R)1GABA82.4%0.0
MeVPMe8 (L)2Glu82.4%0.0
IB045 (R)2ACh72.1%0.3
IB045 (L)2ACh6.52.0%0.4
MeVPMe5 (R)4Glu61.8%0.7
AN10B005 (R)1ACh5.51.7%0.0
MeVP57 (R)1Glu51.5%0.0
CB1997 (L)4Glu51.5%0.2
AVLP470_a (R)1ACh4.51.4%0.0
WED011 (L)1ACh4.51.4%0.0
AN07B035 (R)2ACh4.51.4%0.8
LAL168 (R)1ACh41.2%0.0
vCal3 (R)1ACh3.51.1%0.0
AN06B037 (R)1GABA30.9%0.0
PS173 (R)1Glu30.9%0.0
PS196_b (R)1ACh30.9%0.0
PLP141 (R)1GABA2.50.8%0.0
WED143_a (R)1ACh2.50.8%0.0
PS157 (R)1GABA2.50.8%0.0
GNG580 (L)1ACh2.50.8%0.0
LPT59 (R)1Glu2.50.8%0.0
PS052 (R)2Glu2.50.8%0.2
LAL184 (L)1ACh20.6%0.0
AN06B009 (L)1GABA20.6%0.0
PS127 (R)1ACh20.6%0.0
CB0266 (R)1ACh20.6%0.0
MeVPMe8 (R)2Glu20.6%0.5
PS286 (R)1Glu20.6%0.0
CB1641 (L)1Glu1.50.5%0.0
CB1322 (R)1ACh1.50.5%0.0
CB2270 (L)1ACh1.50.5%0.0
ATL031 (L)1unc1.50.5%0.0
VES056 (L)1ACh1.50.5%0.0
PS261 (L)1ACh1.50.5%0.0
PS197 (R)1ACh1.50.5%0.0
PS068 (L)1ACh1.50.5%0.0
PS175 (L)1Glu1.50.5%0.0
DNpe012_b (L)2ACh1.50.5%0.3
LAL167 (R)2ACh1.50.5%0.3
PLP231 (L)2ACh1.50.5%0.3
PS156 (R)1GABA1.50.5%0.0
OA-VUMa1 (M)2OA1.50.5%0.3
MeVP7 (L)3ACh1.50.5%0.0
AN10B005 (L)1ACh10.3%0.0
PS046 (L)1GABA10.3%0.0
VES056 (R)1ACh10.3%0.0
CB2956 (L)1ACh10.3%0.0
PS215 (R)1ACh10.3%0.0
GNG504 (R)1GABA10.3%0.0
AOTU023 (R)1ACh10.3%0.0
MeVPMe4 (R)1Glu10.3%0.0
PS159 (L)1ACh10.3%0.0
PS076 (R)1GABA10.3%0.0
IB118 (R)1unc10.3%0.0
PS240 (R)1ACh10.3%0.0
PS076 (L)1GABA10.3%0.0
CB0382 (R)1ACh10.3%0.0
DNge115 (R)1ACh10.3%0.0
PLP103 (L)1ACh10.3%0.0
LPT31 (L)1ACh10.3%0.0
CB0086 (R)1GABA10.3%0.0
PS091 (R)1GABA10.3%0.0
IB097 (L)1Glu10.3%0.0
PS214 (L)1Glu10.3%0.0
LoVP90c (L)1ACh10.3%0.0
MeVC2 (R)1ACh10.3%0.0
5-HTPMPV03 (R)15-HT10.3%0.0
PS051 (L)1GABA10.3%0.0
CB1012 (L)1Glu10.3%0.0
LAL096 (R)2Glu10.3%0.0
CB2694 (L)2Glu10.3%0.0
CB1458 (L)2Glu10.3%0.0
5-HTPMPV03 (L)15-HT10.3%0.0
PS032 (L)1ACh0.50.2%0.0
PS051 (R)1GABA0.50.2%0.0
PS263 (L)1ACh0.50.2%0.0
CB4097 (L)1Glu0.50.2%0.0
LoVP33 (L)1GABA0.50.2%0.0
CB1012 (R)1Glu0.50.2%0.0
IB096 (R)1Glu0.50.2%0.0
PS054 (L)1GABA0.50.2%0.0
ATL044 (R)1ACh0.50.2%0.0
PLP095 (L)1ACh0.50.2%0.0
PLP259 (R)1unc0.50.2%0.0
AN10B018 (R)1ACh0.50.2%0.0
PS265 (L)1ACh0.50.2%0.0
vCal2 (R)1Glu0.50.2%0.0
MeVC8 (R)1ACh0.50.2%0.0
MeVP9 (L)1ACh0.50.2%0.0
ATL030 (R)1Glu0.50.2%0.0
LAL200 (L)1ACh0.50.2%0.0
PS359 (R)1ACh0.50.2%0.0
LoVC22 (L)1DA0.50.2%0.0
vCal3 (L)1ACh0.50.2%0.0
OA-AL2i4 (L)1OA0.50.2%0.0
AN06B009 (R)1GABA0.50.2%0.0
OA-VUMa6 (M)1OA0.50.2%0.0
vCal2 (L)1Glu0.50.2%0.0
CB1836 (R)1Glu0.50.2%0.0
PS283 (R)1Glu0.50.2%0.0
PLP001 (L)1GABA0.50.2%0.0
DNg09_a (R)1ACh0.50.2%0.0
PS171 (L)1ACh0.50.2%0.0
WED210 (L)1ACh0.50.2%0.0
GNG616 (R)1ACh0.50.2%0.0
PS177 (L)1Glu0.50.2%0.0
CB1997 (R)1Glu0.50.2%0.0
DNpe015 (L)1ACh0.50.2%0.0
CB4037 (L)1ACh0.50.2%0.0
PS240 (L)1ACh0.50.2%0.0
PS221 (L)1ACh0.50.2%0.0
VES103 (L)1GABA0.50.2%0.0
PS178 (L)1GABA0.50.2%0.0
PS063 (L)1GABA0.50.2%0.0
AVLP470_a (L)1ACh0.50.2%0.0
PS262 (L)1ACh0.50.2%0.0
VES014 (L)1ACh0.50.2%0.0
LAL184 (R)1ACh0.50.2%0.0
ATL021 (R)1Glu0.50.2%0.0
PS173 (L)1Glu0.50.2%0.0
LoVC20 (L)1GABA0.50.2%0.0

Outputs

downstream
partner
#NTconns
CB1641
%
Out
CV
PS263 (R)2ACh36.510.9%0.2
PLP143 (R)1GABA319.2%0.0
PS050 (R)1GABA257.5%0.0
LAL146 (R)1Glu195.7%0.0
IB120 (R)1Glu14.54.3%0.0
PS159 (R)1ACh14.54.3%0.0
PS203 (R)1ACh123.6%0.0
PS231 (R)1ACh10.53.1%0.0
PS310 (R)1ACh103.0%0.0
CB4096 (L)3Glu103.0%0.2
DNpe027 (R)1ACh92.7%0.0
LAL147_c (R)1Glu8.52.5%0.0
IB005 (R)1GABA7.52.2%0.0
CB1556 (R)1Glu72.1%0.0
CL356 (R)2ACh72.1%0.1
IB116 (R)1GABA61.8%0.0
IB076 (R)1ACh61.8%0.0
ATL030 (R)1Glu61.8%0.0
ATL031 (R)1unc5.51.6%0.0
PS160 (R)1GABA51.5%0.0
PS153 (R)3Glu51.5%0.6
CB2459 (L)2Glu4.51.3%0.1
LoVP28 (R)1ACh41.2%0.0
PS091 (R)1GABA41.2%0.0
ATL021 (R)1Glu3.51.0%0.0
DNp49 (R)1Glu3.51.0%0.0
IB058 (R)1Glu30.9%0.0
ATL032 (R)1unc30.9%0.0
PS178 (R)1GABA2.50.7%0.0
ATL006 (R)1ACh2.50.7%0.0
DNpe001 (R)1ACh2.50.7%0.0
ATL031 (L)1unc2.50.7%0.0
CB1997 (L)2Glu2.50.7%0.6
PS159 (L)1ACh20.6%0.0
PLP116 (R)1Glu20.6%0.0
PLP141 (R)1GABA1.50.4%0.0
ATL041 (R)1ACh1.50.4%0.0
VES013 (R)1ACh1.50.4%0.0
CB1641 (L)1Glu1.50.4%0.0
CB1012 (R)1Glu1.50.4%0.0
ATL036 (R)1Glu1.50.4%0.0
ATL035 (R)1Glu1.50.4%0.0
CL099 (R)2ACh1.50.4%0.3
AN10B005 (L)1ACh10.3%0.0
IB014 (R)1GABA10.3%0.0
CL100 (R)1ACh10.3%0.0
IB048 (R)1ACh10.3%0.0
CB0431 (R)1ACh10.3%0.0
PS107 (R)1ACh10.3%0.0
CB4037 (R)1ACh10.3%0.0
IB022 (R)1ACh10.3%0.0
IB031 (R)1Glu10.3%0.0
ATL003 (R)1Glu10.3%0.0
DNp54 (R)1GABA10.3%0.0
LAL009 (R)1ACh10.3%0.0
CB1997_b (L)1Glu10.3%0.0
PS063 (R)1GABA10.3%0.0
LAL150 (R)1Glu0.50.1%0.0
PS240 (L)1ACh0.50.1%0.0
CB2343 (R)1Glu0.50.1%0.0
SMP013 (R)1ACh0.50.1%0.0
ATL030 (L)1Glu0.50.1%0.0
DNpe028 (R)1ACh0.50.1%0.0
PS156 (L)1GABA0.50.1%0.0
CL160 (R)1ACh0.50.1%0.0
aMe17a (R)1unc0.50.1%0.0
LoVP22 (R)1ACh0.50.1%0.0
CB1227 (R)1Glu0.50.1%0.0
WED164 (R)1ACh0.50.1%0.0
PS240 (R)1ACh0.50.1%0.0
CB2094 (R)1ACh0.50.1%0.0
IB083 (R)1ACh0.50.1%0.0
DNpe004 (L)1ACh0.50.1%0.0
IB047 (R)1ACh0.50.1%0.0
LoVC28 (R)1Glu0.50.1%0.0
ANXXX094 (R)1ACh0.50.1%0.0
PS157 (R)1GABA0.50.1%0.0
WED076 (R)1GABA0.50.1%0.0
LAL190 (R)1ACh0.50.1%0.0
PS196_b (R)1ACh0.50.1%0.0
AOTU035 (R)1Glu0.50.1%0.0