Male CNS – Cell Type Explorer

CB1617(R)

22
Total Neurons
Right: 11 | Left: 11
log ratio : 0.00
3,027
Total Synapses
Post: 1,887 | Pre: 1,140
log ratio : -0.73
275.2
Mean Synapses
Post: 171.6 | Pre: 103.6
log ratio : -0.73
Glu(79.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SLP(R)1,73191.7%-0.701,06593.4%
SMP(R)934.9%-0.81534.6%
CentralBrain-unspecified432.3%-1.03211.8%
SIP(R)201.1%-4.3210.1%

Connectivity

Inputs

upstream
partner
#NTconns
CB1617
%
In
CV
CB1884 (R)3Glu11.57.6%0.4
CB1617 (R)11Glu9.56.3%0.6
CB3081 (R)2ACh8.55.6%0.2
SLP211 (R)1ACh8.35.5%0.0
CB1178 (R)8Glu8.35.5%0.9
M_vPNml53 (R)4GABA8.15.4%0.4
FS4B (L)16ACh6.84.5%0.8
FS4A (L)13ACh5.63.7%0.8
SLP359 (R)2ACh5.23.4%0.1
LHPV6i2_a (R)1ACh4.42.9%0.0
CB4139 (R)3ACh3.22.1%0.6
CB4138 (R)5Glu32.0%0.7
CB3050 (R)3ACh2.81.9%0.9
SLP355 (R)1ACh2.51.6%0.0
LHPV6f3_b (R)2ACh2.31.5%0.1
SLP387 (R)1Glu2.11.4%0.0
FS4C (L)8ACh21.3%0.5
SLP355 (L)1ACh1.91.3%0.0
CB4107 (R)5ACh1.91.3%0.8
DN1pB (R)2Glu1.51.0%0.3
CB2079 (R)1ACh1.51.0%0.0
CB2970 (R)1Glu1.51.0%0.0
SLP414 (R)4Glu1.51.0%1.2
SLP271 (R)1ACh1.40.9%0.0
LHAV3e3_a (R)1ACh1.30.8%0.0
LHPV5a3 (R)3ACh1.30.8%0.5
SLP315 (R)1Glu1.20.8%0.0
CB1154 (R)4Glu1.20.8%0.6
SLP316 (R)1Glu1.10.7%0.0
CB3005 (R)2Glu1.10.7%0.3
CB3556 (R)1ACh1.10.7%0.0
CB2563 (R)1ACh1.10.7%0.0
SLP173 (R)1Glu10.7%0.0
CB1782 (R)3ACh0.90.6%0.8
SMP183 (R)1ACh0.90.6%0.0
LHAV3a1_b (R)2ACh0.90.6%0.2
CB1387 (R)3ACh0.90.6%0.6
SLP347 (R)2Glu0.80.5%0.8
CB4088 (R)2ACh0.80.5%0.3
CB4128 (R)2unc0.80.5%0.1
SLP457 (R)2unc0.80.5%0.6
CB1685 (R)4Glu0.80.5%0.4
AN27X009 (R)1ACh0.70.5%0.0
CB3084 (R)1Glu0.70.5%0.0
M_vPNml54 (R)1GABA0.70.5%0.0
SLP374 (L)1unc0.70.5%0.0
CSD (L)15-HT0.70.5%0.0
CB2517 (R)2Glu0.60.4%0.4
LHPV6f3_b (L)2ACh0.60.4%0.7
CB1838 (R)2GABA0.60.4%0.1
CB1595 (R)3ACh0.60.4%0.2
CB1352 (R)2Glu0.50.4%0.3
CB2948 (R)1Glu0.50.4%0.0
CB1201 (R)2ACh0.50.4%0.3
CB1391 (R)2Glu0.50.4%0.7
SMP167 (R)4unc0.50.4%0.3
SLP224 (R)2ACh0.50.3%0.6
SLP403 (L)2unc0.50.3%0.2
SLP300 (R)2Glu0.50.3%0.6
PPL203 (R)1unc0.50.3%0.0
CB4087 (R)3ACh0.50.3%0.6
CB4023 (R)2ACh0.50.3%0.6
CB4129 (R)2Glu0.50.3%0.6
SMP297 (R)2GABA0.50.3%0.2
SLP374 (R)1unc0.50.3%0.0
CSD (R)15-HT0.50.3%0.0
CB4152 (R)1ACh0.40.2%0.0
CB2467 (R)2ACh0.40.2%0.5
LHPV6a10 (R)1ACh0.40.2%0.0
SMP252 (R)1ACh0.40.2%0.0
CB4022 (R)1ACh0.40.2%0.0
LHPD3a2_a (R)1Glu0.30.2%0.0
SLP210 (R)1ACh0.30.2%0.0
PRW004 (M)1Glu0.30.2%0.0
SLP109 (R)1Glu0.30.2%0.0
SLP202 (R)1Glu0.30.2%0.0
SLP368 (R)1ACh0.30.2%0.0
SLP441 (R)1ACh0.30.2%0.0
SLP269 (R)1ACh0.30.2%0.0
LHAD1d1 (R)1ACh0.30.2%0.0
SLP075 (R)1Glu0.30.2%0.0
M_lvPNm37 (R)2ACh0.30.2%0.3
SLP397 (R)1ACh0.30.2%0.0
FB9C (R)1Glu0.30.2%0.0
CB3240 (R)1ACh0.30.2%0.0
SLP302 (R)2Glu0.30.2%0.3
FB8H (R)1Glu0.30.2%0.0
CB3133 (R)1ACh0.20.1%0.0
SLP365 (R)1Glu0.20.1%0.0
SLP360_a (R)1ACh0.20.1%0.0
GNG484 (R)1ACh0.20.1%0.0
M_lvPNm35 (R)1ACh0.20.1%0.0
CB2600 (R)1Glu0.20.1%0.0
CB3281 (R)1Glu0.20.1%0.0
LHAV2i4 (R)1ACh0.20.1%0.0
CB1333 (R)1ACh0.20.1%0.0
SMP539 (R)1Glu0.20.1%0.0
SMP743 (L)1ACh0.20.1%0.0
SLP372 (R)1ACh0.20.1%0.0
SLP398 (R)1ACh0.20.1%0.0
CB3541 (R)1ACh0.20.1%0.0
CB1897 (R)1ACh0.20.1%0.0
SMP743 (R)1ACh0.20.1%0.0
CB1406 (R)2Glu0.20.1%0.0
FB9A (R)1Glu0.20.1%0.0
SA3 (R)1Glu0.20.1%0.0
LHPV6a9_b (R)2ACh0.20.1%0.0
CB4133 (R)1Glu0.20.1%0.0
SMP497 (R)1Glu0.20.1%0.0
CB4126 (R)1GABA0.20.1%0.0
FB9B_c (R)1Glu0.20.1%0.0
CB4130 (R)1Glu0.10.1%0.0
CB1212 (R)1Glu0.10.1%0.0
CB3293 (R)1ACh0.10.1%0.0
CL255 (L)1ACh0.10.1%0.0
LHPV6c1 (R)1ACh0.10.1%0.0
CB2208 (R)1ACh0.10.1%0.0
SLP268 (R)1Glu0.10.1%0.0
SLP405_a (L)1ACh0.10.1%0.0
SMP255 (R)1ACh0.10.1%0.0
CB3539 (R)1Glu0.10.1%0.0
SMP352 (R)1ACh0.10.1%0.0
SLP394 (R)1ACh0.10.1%0.0
SMP424 (R)1Glu0.10.1%0.0
CB1981 (R)1Glu0.10.1%0.0
SMP539 (L)1Glu0.10.1%0.0
LHAV6i2_b (R)1ACh0.10.1%0.0
SLP373 (R)1unc0.10.1%0.0
LHAV3a1_c (R)1ACh0.10.1%0.0
SMP551 (R)1ACh0.10.1%0.0
SMP350 (R)1ACh0.10.1%0.0
CB2437 (R)1Glu0.10.1%0.0
CB1057 (R)1Glu0.10.1%0.0
SLP149 (R)1ACh0.10.1%0.0
CB2814 (R)1Glu0.10.1%0.0
FB8G (R)1Glu0.10.1%0.0
SLP354 (R)1Glu0.10.1%0.0
SMP187 (R)1ACh0.10.1%0.0
FB7B (R)1unc0.10.1%0.0
LNd_c (R)1ACh0.10.1%0.0
SLP068 (R)1Glu0.10.1%0.0
BiT (L)1ACh0.10.1%0.0
SLP412_a (R)1Glu0.10.1%0.0
FB7K (R)1Glu0.10.1%0.0
SLP266 (R)1Glu0.10.1%0.0
MeVP34 (R)1ACh0.10.1%0.0
LHAV3j1 (R)1ACh0.10.1%0.0
CB4157 (R)1Glu0.10.1%0.0
CB2346 (R)1Glu0.10.1%0.0
SMP538 (R)1Glu0.10.1%0.0
LHPV5l1 (R)1ACh0.10.1%0.0

Outputs

downstream
partner
#NTconns
CB1617
%
Out
CV
FB1D (R)3Glu36.219.6%0.4
SLP414 (R)5Glu126.5%0.9
CB1617 (R)10Glu9.55.2%0.4
SLP387 (R)1Glu9.25.0%0.0
SMP167 (R)6unc8.14.4%0.5
SLP359 (R)2ACh7.33.9%0.1
SLP211 (R)1ACh6.93.7%0.0
CB4157 (R)3Glu6.53.5%0.8
CB4133 (R)3Glu5.53.0%0.3
FB8H (R)3Glu5.32.9%0.3
SMP497 (R)2Glu4.12.2%0.1
CB1884 (R)3Glu3.62.0%0.4
SMP166 (R)3GABA3.51.9%0.2
FB8F_b (R)3Glu3.41.8%0.5
SA1_a (R)3Glu2.81.5%0.5
FB8E (R)2Glu2.81.5%0.2
FB1E_b (R)1Glu2.61.4%0.0
FS4A (L)11ACh2.51.4%0.6
SLP347 (R)2Glu2.41.3%0.3
CB4156 (R)1unc2.31.2%0.0
CB3050 (R)2ACh2.11.1%0.8
SMP505 (R)1ACh21.1%0.0
FB8A (R)1Glu21.1%0.0
CB2814 (R)5Glu1.81.0%0.4
SA1_b (R)3Glu1.70.9%0.3
CB1406 (R)3Glu1.60.9%1.2
LHPV5a3 (R)3ACh1.50.8%0.9
FB9B_b (R)2Glu1.50.8%0.2
CB4139 (R)2ACh1.40.7%0.6
CB4107 (R)3ACh1.30.7%1.0
CB4134 (R)3Glu1.20.6%0.7
LHPV5e2 (R)1ACh1.10.6%0.0
LHPV6f3_b (R)2ACh1.10.6%0.2
CB2517 (R)2Glu1.10.6%0.2
SMP305 (R)2unc0.90.5%0.6
SMP297 (R)2GABA0.90.5%0.6
LHPV6i2_a (R)1ACh0.80.4%0.0
SLP368 (R)1ACh0.80.4%0.0
SLP394 (R)1ACh0.80.4%0.0
FS4B (L)5ACh0.80.4%0.4
SMP743 (R)2ACh0.80.4%0.6
CB1178 (R)6Glu0.80.4%0.5
CSD (L)15-HT0.70.4%0.0
FS4C (L)1ACh0.70.4%0.0
CB4023 (R)3ACh0.70.4%0.5
FB7K (R)1Glu0.60.3%0.0
FB1B (R)2Glu0.50.3%0.3
SMP183 (R)1ACh0.50.3%0.0
FB9C (R)2Glu0.50.2%0.6
CB3084 (R)1Glu0.50.2%0.0
SA3 (R)2Glu0.50.2%0.6
SLP458 (R)1Glu0.50.2%0.0
CB1608 (R)1Glu0.50.2%0.0
SMP426 (R)2Glu0.50.2%0.2
M_vPNml53 (R)3GABA0.50.2%0.3
SMP095 (R)1Glu0.40.2%0.0
BiT (L)1ACh0.40.2%0.0
CB1009 (R)1unc0.40.2%0.0
LHPV6f3_b (L)2ACh0.40.2%0.5
LHAD1d1 (R)1ACh0.40.2%0.0
SMP184 (R)1ACh0.40.2%0.0
CB1391 (R)2Glu0.40.2%0.5
SLP269 (R)1ACh0.40.2%0.0
LHAV3a1_b (R)1ACh0.40.2%0.0
FB9B_e (R)2Glu0.40.2%0.5
FB8D (R)1Glu0.40.2%0.0
CB1685 (R)2Glu0.40.2%0.5
SMP095 (L)1Glu0.30.1%0.0
FB1E_a (R)1Glu0.30.1%0.0
SLP368 (L)1ACh0.30.1%0.0
SLP398 (R)1ACh0.30.1%0.0
LHPV5l1 (R)1ACh0.30.1%0.0
SLP372 (R)2ACh0.30.1%0.3
FB9B_c (R)1Glu0.30.1%0.0
SLP075 (R)1Glu0.30.1%0.0
SMP299 (R)1GABA0.30.1%0.0
SLP355 (R)1ACh0.30.1%0.0
SLP315 (R)1Glu0.30.1%0.0
CB2346 (R)1Glu0.20.1%0.0
FB6T (R)1Glu0.20.1%0.0
BiT (R)1ACh0.20.1%0.0
SLP405_a (L)1ACh0.20.1%0.0
SIP015 (R)1Glu0.20.1%0.0
CB2948 (R)1Glu0.20.1%0.0
SLP412_b (R)1Glu0.20.1%0.0
CB3069 (R)1ACh0.20.1%0.0
SMP337 (R)1Glu0.20.1%0.0
FB9A (R)1Glu0.20.1%0.0
SLP402_a (R)2Glu0.20.1%0.0
SLP374 (L)1unc0.20.1%0.0
PPL203 (R)1unc0.20.1%0.0
LHPD4e1_b (R)1Glu0.10.0%0.0
CB3081 (R)1ACh0.10.0%0.0
DN1pB (R)1Glu0.10.0%0.0
SLP405_a (R)1ACh0.10.0%0.0
SLP266 (R)1Glu0.10.0%0.0
SLP354 (R)1Glu0.10.0%0.0
CB1838 (R)1GABA0.10.0%0.0
CB3541 (R)1ACh0.10.0%0.0
CB4130 (R)1Glu0.10.0%0.0
CB1081 (R)1GABA0.10.0%0.0
FB7L (R)1Glu0.10.0%0.0
CB1858 (R)1unc0.10.0%0.0
SLP441 (R)1ACh0.10.0%0.0
CB4022 (R)1ACh0.10.0%0.0
CB3556 (R)1ACh0.10.0%0.0
SLP265 (R)1Glu0.10.0%0.0
SMP187 (R)1ACh0.10.0%0.0
SMP235 (R)1Glu0.10.0%0.0
FB7M (R)1Glu0.10.0%0.0
SLP355 (L)1ACh0.10.0%0.0
CB4126 (R)1GABA0.10.0%0.0
SLP457 (R)1unc0.10.0%0.0
SLP207 (R)1GABA0.10.0%0.0
SLP273 (R)1ACh0.10.0%0.0
FB1A (R)1Glu0.10.0%0.0
FB9B_d (R)1Glu0.10.0%0.0
SLP173 (R)1Glu0.10.0%0.0
CL152 (R)1Glu0.10.0%0.0
SMP505 (L)1ACh0.10.0%0.0
SMP076 (R)1GABA0.10.0%0.0
FB8I (R)1Glu0.10.0%0.0
SAF (R)1Glu0.10.0%0.0
SLP268 (R)1Glu0.10.0%0.0
M_lvPNm37 (R)1ACh0.10.0%0.0
LoVP64 (R)1Glu0.10.0%0.0