Male CNS – Cell Type Explorer

CB1550(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,065
Total Synapses
Post: 662 | Pre: 403
log ratio : -0.72
1,065
Mean Synapses
Post: 662 | Pre: 403
log ratio : -0.72
ACh(95.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
IB25738.8%-5.2071.7%
LAL(L)385.7%2.1016340.4%
VES(L)345.1%2.2816540.9%
SPS(R)11717.7%-4.5551.2%
CentralBrain-unspecified558.3%-0.264611.4%
ICL(R)8813.3%-3.2992.2%
GOR(R)659.8%-3.0282.0%
SCL(R)81.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1550
%
In
CV
aMe5 (R)15ACh16125.3%0.6
CB1556 (L)7Glu538.3%0.4
CB2343 (L)2Glu253.9%0.6
VES101 (R)2GABA203.1%0.7
CB2462 (L)1Glu172.7%0.0
AN06B075 (R)1GABA162.5%0.0
OA-VUMa8 (M)1OA142.2%0.0
CL367 (L)1GABA121.9%0.0
MeVPMe4 (L)2Glu121.9%0.7
CL366 (L)1GABA111.7%0.0
VES102 (R)1GABA101.6%0.0
PLP001 (R)1GABA101.6%0.0
VES053 (L)1ACh91.4%0.0
LoVC20 (L)1GABA91.4%0.0
GNG103 (R)1GABA91.4%0.0
SMP472 (L)2ACh91.4%0.6
DNpe024 (L)1ACh81.3%0.0
IB059_a (L)1Glu81.3%0.0
CL367 (R)1GABA81.3%0.0
VES053 (R)1ACh71.1%0.0
PPM1205 (L)1DA60.9%0.0
GNG103 (L)1GABA50.8%0.0
CL116 (R)1GABA50.8%0.0
AVLP526 (R)2ACh50.8%0.2
PLP074 (R)1GABA40.6%0.0
LAL053 (L)1Glu40.6%0.0
SMP470 (L)1ACh40.6%0.0
PS286 (L)1Glu40.6%0.0
VES100 (R)1GABA40.6%0.0
IB059_a (R)1Glu40.6%0.0
MeVPMe3 (L)1Glu40.6%0.0
PVLP076 (R)1ACh40.6%0.0
PLP074 (L)1GABA40.6%0.0
CL356 (R)2ACh40.6%0.0
SMP470 (R)1ACh30.5%0.0
CB2985 (R)1ACh30.5%0.0
CB3098 (R)1ACh30.5%0.0
CB3595 (R)1GABA30.5%0.0
AVLP039 (R)1ACh30.5%0.0
MeVP61 (R)1Glu30.5%0.0
CL316 (L)1GABA30.5%0.0
LAL082 (L)1unc30.5%0.0
GNG124 (R)1GABA30.5%0.0
LoVC18 (R)1DA30.5%0.0
AVLP541 (R)2Glu30.5%0.3
VES037 (R)1GABA20.3%0.0
VES101 (L)1GABA20.3%0.0
PLP075 (R)1GABA20.3%0.0
CL215 (R)1ACh20.3%0.0
IB031 (R)1Glu20.3%0.0
AVLP059 (R)1Glu20.3%0.0
CL183 (L)1Glu20.3%0.0
IB101 (L)1Glu20.3%0.0
CB3630 (R)1Glu20.3%0.0
AVLP113 (L)1ACh20.3%0.0
LAL159 (R)1ACh20.3%0.0
IB115 (R)1ACh20.3%0.0
LoVC22 (R)1DA20.3%0.0
GNG506 (R)1GABA20.3%0.0
DNg88 (L)1ACh20.3%0.0
AN02A002 (L)1Glu20.3%0.0
CL366 (R)1GABA20.3%0.0
CB0677 (R)1GABA20.3%0.0
OA-VUMa1 (M)1OA20.3%0.0
SMP472 (R)2ACh20.3%0.0
VES087 (R)2GABA20.3%0.0
VES033 (R)1GABA10.2%0.0
LAL123 (L)1unc10.2%0.0
SMP714m (R)1ACh10.2%0.0
SMP446 (L)1Glu10.2%0.0
CL318 (R)1GABA10.2%0.0
OA-ASM2 (L)1unc10.2%0.0
VES099 (R)1GABA10.2%0.0
VES076 (L)1ACh10.2%0.0
DNpe023 (R)1ACh10.2%0.0
LAL113 (L)1GABA10.2%0.0
DNa03 (L)1ACh10.2%0.0
DNae005 (L)1ACh10.2%0.0
SMP455 (R)1ACh10.2%0.0
LAL043_d (L)1GABA10.2%0.0
CL212 (R)1ACh10.2%0.0
PS186 (R)1Glu10.2%0.0
VES019 (R)1GABA10.2%0.0
SMP372 (R)1ACh10.2%0.0
DNde003 (L)1ACh10.2%0.0
CB1252 (R)1Glu10.2%0.0
CL177 (L)1Glu10.2%0.0
CL275 (L)1ACh10.2%0.0
CB4206 (L)1Glu10.2%0.0
CB4097 (R)1Glu10.2%0.0
IB084 (R)1ACh10.2%0.0
IB076 (R)1ACh10.2%0.0
LAL151 (L)1Glu10.2%0.0
CRE200m (R)1Glu10.2%0.0
CB2624 (R)1ACh10.2%0.0
CL210_a (R)1ACh10.2%0.0
IB017 (R)1ACh10.2%0.0
AVLP442 (R)1ACh10.2%0.0
MeVP54 (L)1Glu10.2%0.0
IB071 (R)1ACh10.2%0.0
CL176 (R)1Glu10.2%0.0
CB2094 (R)1ACh10.2%0.0
CB1554 (R)1ACh10.2%0.0
AVLP176_b (L)1ACh10.2%0.0
AVLP040 (R)1ACh10.2%0.0
AVLP521 (R)1ACh10.2%0.0
IB083 (L)1ACh10.2%0.0
AVLP120 (L)1ACh10.2%0.0
LAL302m (L)1ACh10.2%0.0
LC19 (R)1ACh10.2%0.0
LAL179 (R)1ACh10.2%0.0
ANXXX030 (L)1ACh10.2%0.0
IB115 (L)1ACh10.2%0.0
LAL196 (R)1ACh10.2%0.0
PS019 (L)1ACh10.2%0.0
CRE012 (R)1GABA10.2%0.0
CL073 (L)1ACh10.2%0.0
AVLP120 (R)1ACh10.2%0.0
CL022_c (R)1ACh10.2%0.0
OA-ASM3 (L)1unc10.2%0.0
IB023 (R)1ACh10.2%0.0
CL029_a (R)1Glu10.2%0.0
PVLP211m_b (L)1ACh10.2%0.0
IB012 (L)1GABA10.2%0.0
AVLP571 (R)1ACh10.2%0.0
CL071_b (L)1ACh10.2%0.0
CL110 (R)1ACh10.2%0.0
DNpe031 (R)1Glu10.2%0.0
VES074 (R)1ACh10.2%0.0
IB012 (R)1GABA10.2%0.0
LAL083 (L)1Glu10.2%0.0
LAL123 (R)1unc10.2%0.0
DNg13 (L)1ACh10.2%0.0
DNb09 (L)1Glu10.2%0.0
DNp69 (R)1ACh10.2%0.0
AN19B017 (R)1ACh10.2%0.0
LAL124 (R)1Glu10.2%0.0
CL001 (R)1Glu10.2%0.0
AVLP016 (R)1Glu10.2%0.0

Outputs

downstream
partner
#NTconns
CB1550
%
Out
CV
LAL083 (L)2Glu9210.1%0.1
PS322 (L)1Glu657.2%0.0
LAL113 (L)2GABA556.1%0.1
PS019 (L)2ACh455.0%0.1
LAL159 (L)1ACh404.4%0.0
DNae007 (L)1ACh364.0%0.0
DNg88 (L)1ACh313.4%0.0
DNpe023 (L)1ACh232.5%0.0
DNa06 (L)1ACh222.4%0.0
CRE015 (L)1ACh222.4%0.0
DNde003 (L)2ACh222.4%0.5
DNa13 (L)2ACh222.4%0.2
PPM1205 (L)1DA192.1%0.0
DNpe024 (L)1ACh171.9%0.0
CL029_a (R)1Glu171.9%0.0
DNg13 (L)1ACh171.9%0.0
DNae001 (L)1ACh121.3%0.0
GNG590 (L)1GABA111.2%0.0
LNO2 (L)1Glu111.2%0.0
DNa03 (L)1ACh101.1%0.0
LAL173 (L)2ACh101.1%0.6
DNb02 (L)2Glu101.1%0.2
DNa02 (L)1ACh91.0%0.0
LAL014 (L)1ACh91.0%0.0
LAL040 (R)1GABA80.9%0.0
GNG124 (L)1GABA80.9%0.0
DNg75 (L)1ACh80.9%0.0
VES092 (L)1GABA70.8%0.0
MDN (R)1ACh70.8%0.0
GNG562 (L)1GABA60.7%0.0
CRE014 (L)1ACh60.7%0.0
SMP110 (L)1ACh60.7%0.0
DNp13 (L)1ACh60.7%0.0
OA-VUMa1 (M)1OA60.7%0.0
MDN (L)2ACh60.7%0.3
LAL124 (L)1Glu50.6%0.0
LAL135 (L)1ACh50.6%0.0
VES018 (L)1GABA50.6%0.0
CL029_b (R)1Glu50.6%0.0
DNa11 (L)1ACh50.6%0.0
CL215 (L)2ACh50.6%0.6
LAL098 (L)1GABA40.4%0.0
IB023 (R)1ACh40.4%0.0
PS060 (L)1GABA40.4%0.0
LAL200 (L)1ACh40.4%0.0
LAL082 (L)1unc40.4%0.0
DNge041 (L)1ACh40.4%0.0
DNp101 (R)1ACh40.4%0.0
DNp52 (L)1ACh40.4%0.0
CL248 (L)1GABA30.3%0.0
VES047 (L)1Glu30.3%0.0
LAL090 (L)1Glu30.3%0.0
LAL144 (L)1ACh30.3%0.0
LAL046 (L)1GABA30.3%0.0
PS187 (L)1Glu30.3%0.0
CL055 (L)1GABA30.3%0.0
CB0677 (L)1GABA30.3%0.0
PS100 (L)1GABA30.3%0.0
LAL119 (L)1ACh20.2%0.0
VES106 (R)1GABA20.2%0.0
pIP10 (L)1ACh20.2%0.0
DNae008 (L)1ACh20.2%0.0
LAL084 (L)1Glu20.2%0.0
DNa09 (L)1ACh20.2%0.0
CB2985 (R)1ACh20.2%0.0
DNpe011 (R)1ACh20.2%0.0
SMP079 (L)1GABA20.2%0.0
LAL043_c (L)1GABA20.2%0.0
VES057 (L)1ACh20.2%0.0
LAL163 (L)1ACh20.2%0.0
VES059 (L)1ACh20.2%0.0
CB0397 (L)1GABA20.2%0.0
DNp14 (R)1ACh20.2%0.0
CL311 (R)1ACh20.2%0.0
SMP543 (L)1GABA20.2%0.0
DNa15 (L)1ACh20.2%0.0
DNp13 (R)1ACh20.2%0.0
DNp103 (R)1ACh20.2%0.0
DNpe042 (L)1ACh20.2%0.0
aMe5 (R)2ACh20.2%0.0
GNG584 (L)1GABA10.1%0.0
VES073 (R)1ACh10.1%0.0
VES078 (R)1ACh10.1%0.0
GNG553 (L)1ACh10.1%0.0
LAL024 (L)1ACh10.1%0.0
aIPg1 (L)1ACh10.1%0.0
LAL053 (L)1Glu10.1%0.0
LAL120_a (L)1Glu10.1%0.0
DNpe023 (R)1ACh10.1%0.0
LAL073 (L)1Glu10.1%0.0
SMP594 (R)1GABA10.1%0.0
LAL018 (L)1ACh10.1%0.0
DNa16 (L)1ACh10.1%0.0
CL211 (R)1ACh10.1%0.0
MBON32 (R)1GABA10.1%0.0
PVLP141 (R)1ACh10.1%0.0
CL212 (R)1ACh10.1%0.0
VES053 (R)1ACh10.1%0.0
DNd05 (R)1ACh10.1%0.0
DNg97 (R)1ACh10.1%0.0
VES101 (R)1GABA10.1%0.0
GNG103 (L)1GABA10.1%0.0
CB1556 (L)1Glu10.1%0.0
CB3098 (R)1ACh10.1%0.0
LoVC26 (R)1Glu10.1%0.0
LAL127 (L)1GABA10.1%0.0
IB076 (R)1ACh10.1%0.0
CL261 (R)1ACh10.1%0.0
PVLP209m (L)1ACh10.1%0.0
CB1087 (R)1GABA10.1%0.0
PS049 (L)1GABA10.1%0.0
AN06B075 (R)1GABA10.1%0.0
LAL167 (L)1ACh10.1%0.0
CB2094 (R)1ACh10.1%0.0
CB1554 (R)1ACh10.1%0.0
CL266_b2 (R)1ACh10.1%0.0
LAL301m (L)1ACh10.1%0.0
LoVP29 (R)1GABA10.1%0.0
CB3870 (L)1Glu10.1%0.0
LAL302m (L)1ACh10.1%0.0
IB115 (L)1ACh10.1%0.0
LAL300m (L)1ACh10.1%0.0
CRE012 (R)1GABA10.1%0.0
PVLP201m_d (L)1ACh10.1%0.0
CB0079 (L)1GABA10.1%0.0
CL316 (R)1GABA10.1%0.0
DNg64 (L)1GABA10.1%0.0
VES072 (L)1ACh10.1%0.0
CL316 (L)1GABA10.1%0.0
OA-ASM3 (L)1unc10.1%0.0
AVLP702m (L)1ACh10.1%0.0
LAL111 (L)1GABA10.1%0.0
DNp46 (R)1ACh10.1%0.0
GNG316 (L)1ACh10.1%0.0
CL322 (R)1ACh10.1%0.0
DNp67 (R)1ACh10.1%0.0
PVLP122 (R)1ACh10.1%0.0
aIPg6 (L)1ACh10.1%0.0
DNge123 (L)1Glu10.1%0.0
LAL161 (R)1ACh10.1%0.0
AVLP077 (R)1GABA10.1%0.0
PVLP140 (L)1GABA10.1%0.0
PS101 (R)1GABA10.1%0.0
LAL123 (R)1unc10.1%0.0
LAL183 (L)1ACh10.1%0.0
DNp70 (R)1ACh10.1%0.0
VES045 (L)1GABA10.1%0.0
AOTU042 (L)1GABA10.1%0.0
DNp43 (R)1ACh10.1%0.0
LAL125 (L)1Glu10.1%0.0
SMP604 (R)1Glu10.1%0.0
CRE004 (L)1ACh10.1%0.0
CL366 (R)1GABA10.1%0.0
DNg34 (L)1unc10.1%0.0