Male CNS – Cell Type Explorer

CB1407(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
458
Total Synapses
Post: 227 | Pre: 231
log ratio : 0.03
458
Mean Synapses
Post: 227 | Pre: 231
log ratio : 0.03
ACh(84.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WED(L)15769.2%-0.3212654.5%
PLP(L)3214.1%1.549340.3%
SAD187.9%-1.3673.0%
AMMC(L)167.0%-2.4231.3%
CentralBrain-unspecified31.3%-0.5820.9%
SIP(L)10.4%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1407
%
In
CV
AMMC011 (R)1ACh2812.9%0.0
WED201 (L)4GABA198.8%1.1
WEDPN8C (L)5ACh156.9%0.8
ATL030 (L)1Glu136.0%0.0
JO-C/D/E5ACh115.1%0.5
AMMC012 (R)1ACh83.7%0.0
WED143_a (R)1ACh73.2%0.0
WED101 (L)2Glu73.2%0.7
WED166_a (R)1ACh62.8%0.0
WEDPN17_a1 (L)2ACh62.8%0.3
ALIN2 (L)1ACh52.3%0.0
WEDPN8D (L)3ACh52.3%0.6
WEDPN11 (L)1Glu41.8%0.0
AN06B009 (L)1GABA41.8%0.0
CB1145 (L)2GABA41.8%0.5
LAL131 (L)1Glu31.4%0.0
CB3738 (L)1GABA31.4%0.0
PLP010 (R)1Glu31.4%0.0
CB3437 (R)1ACh31.4%0.0
AMMC030 (L)1GABA31.4%0.0
CB3320 (L)1GABA31.4%0.0
SAD112_b (L)1GABA31.4%0.0
LHPV6q1 (L)1unc31.4%0.0
WEDPN17_b (L)2ACh31.4%0.3
WEDPN9 (L)1ACh20.9%0.0
WEDPN8B (L)1ACh20.9%0.0
CB3739 (L)1GABA20.9%0.0
PPM1202 (L)1DA20.9%0.0
CB3746 (L)1GABA20.9%0.0
SAD112_c (L)1GABA20.9%0.0
WED163 (L)2ACh20.9%0.0
CB1268 (L)2ACh20.9%0.0
M_lPNm11A (L)2ACh20.9%0.0
CB3747 (L)1GABA10.5%0.0
AMMC031 (L)1GABA10.5%0.0
SAD030 (L)1GABA10.5%0.0
SAD111 (L)1GABA10.5%0.0
DNp56 (L)1ACh10.5%0.0
CB1533 (L)1ACh10.5%0.0
WED031 (L)1GABA10.5%0.0
WED122 (L)1GABA10.5%0.0
CB3745 (L)1GABA10.5%0.0
CB1023 (L)1Glu10.5%0.0
CB3798 (L)1GABA10.5%0.0
CB4228 (L)1ACh10.5%0.0
SAD080 (L)1Glu10.5%0.0
SMP145 (L)1unc10.5%0.0
WED091 (L)1ACh10.5%0.0
CB1533 (R)1ACh10.5%0.0
AN07B036 (R)1ACh10.5%0.0
CB3631 (R)1ACh10.5%0.0
CB4094 (R)1ACh10.5%0.0
WEDPN10A (R)1GABA10.5%0.0
WEDPN5 (L)1GABA10.5%0.0
PLP247 (L)1Glu10.5%0.0
LoVP50 (L)1ACh10.5%0.0
CB3673 (R)1ACh10.5%0.0
DNge138 (M)1unc10.5%0.0
AVLP086 (L)1GABA10.5%0.0
AN06B009 (R)1GABA10.5%0.0
AVLP079 (L)1GABA10.5%0.0
WED203 (L)1GABA10.5%0.0
OA-VUMa6 (M)1OA10.5%0.0

Outputs

downstream
partner
#NTconns
CB1407
%
Out
CV
WED145 (L)3ACh205.2%0.7
WED143_a (L)4ACh153.9%1.0
WED004 (L)5ACh133.4%0.5
PLP097 (L)1ACh123.1%0.0
PLP039 (L)3Glu123.1%0.9
WED034 (L)3Glu112.8%0.6
LHPV2g1 (L)2ACh112.8%0.3
WEDPN2A (L)2GABA112.8%0.1
WED201 (L)2GABA92.3%0.3
CB3739 (L)2GABA92.3%0.3
WED057 (L)4GABA92.3%0.6
LHAV2g6 (L)1ACh82.1%0.0
WED143_c (L)1ACh71.8%0.0
LHCENT4 (L)1Glu71.8%0.0
CB0224 (L)1GABA61.6%0.0
WED026 (L)2GABA61.6%0.3
CL056 (L)1GABA51.3%0.0
WED199 (L)1GABA51.3%0.0
M_lv2PN9t49_a (L)1GABA51.3%0.0
WED168 (L)1ACh51.3%0.0
ATL030 (L)1Glu51.3%0.0
LHAV2b4 (L)2ACh51.3%0.6
WEDPN8C (L)4ACh51.3%0.3
PLP028 (L)1unc41.0%0.0
AMMC028 (L)1GABA41.0%0.0
WEDPN12 (L)1Glu41.0%0.0
WED035 (L)2Glu41.0%0.5
WED032 (L)2GABA41.0%0.5
CB4094 (L)2ACh41.0%0.5
WED163 (L)3ACh41.0%0.4
WEDPN11 (L)1Glu30.8%0.0
PLP221 (L)1ACh30.8%0.0
LHPV2d1 (L)1GABA30.8%0.0
WEDPN7C (L)1ACh30.8%0.0
LHPV2a1_d (L)1GABA30.8%0.0
M_l2PNl22 (L)1ACh30.8%0.0
ATL014 (L)1Glu30.8%0.0
M_l2PNl20 (L)1ACh30.8%0.0
CB2081_a (L)2ACh30.8%0.3
WEDPN6A (L)2GABA30.8%0.3
SAD116 (L)2Glu30.8%0.3
WED164 (L)3ACh30.8%0.0
WEDPN7A (L)3ACh30.8%0.0
CB1504 (L)1Glu20.5%0.0
WEDPN10B (R)1GABA20.5%0.0
CB1818 (L)1ACh20.5%0.0
CB1148 (L)1Glu20.5%0.0
WEDPN8B (L)1ACh20.5%0.0
SLP314 (L)1Glu20.5%0.0
PLP116 (L)1Glu20.5%0.0
WED094 (L)1Glu20.5%0.0
PLP245 (L)1ACh20.5%0.0
CL054 (L)1GABA20.5%0.0
CB3381 (L)1GABA20.5%0.0
LHPV3a1 (L)1ACh20.5%0.0
WED089 (R)1ACh20.5%0.0
WED129 (L)1ACh20.5%0.0
VES001 (L)1Glu20.5%0.0
WEDPN1A (L)1GABA20.5%0.0
PPM1202 (L)1DA20.5%0.0
WED194 (L)1GABA20.5%0.0
CB0440 (L)1ACh20.5%0.0
WED069 (L)1ACh20.5%0.0
WED080 (L)1GABA20.5%0.0
AMMC012 (R)1ACh20.5%0.0
WEDPN4 (L)1GABA20.5%0.0
WED203 (L)1GABA20.5%0.0
SAD030 (L)2GABA20.5%0.0
WED101 (L)2Glu20.5%0.0
WED143_b (L)2ACh20.5%0.0
CB1268 (L)2ACh20.5%0.0
M_lPNm11A (L)2ACh20.5%0.0
WEDPN3 (L)2GABA20.5%0.0
CB3064 (L)1GABA10.3%0.0
WED030_a (L)1GABA10.3%0.0
AMMC031 (L)1GABA10.3%0.0
CB1202 (L)1ACh10.3%0.0
WED012 (L)1GABA10.3%0.0
DNp56 (L)1ACh10.3%0.0
PS157 (L)1GABA10.3%0.0
CB1818 (R)1ACh10.3%0.0
MBON16 (L)1ACh10.3%0.0
WED200 (L)1GABA10.3%0.0
CB3316 (L)1ACh10.3%0.0
WED002 (L)1ACh10.3%0.0
CB1300 (L)1ACh10.3%0.0
LHPV5b3 (L)1ACh10.3%0.0
AOTU034 (L)1ACh10.3%0.0
CB4200 (L)1ACh10.3%0.0
CB2713 (L)1ACh10.3%0.0
CB1213 (L)1ACh10.3%0.0
CB2431 (L)1GABA10.3%0.0
WED093 (L)1ACh10.3%0.0
WED197 (L)1GABA10.3%0.0
CB2881 (L)1Glu10.3%0.0
SAD011 (L)1GABA10.3%0.0
PLP043 (L)1Glu10.3%0.0
CB3759 (L)1Glu10.3%0.0
CB0986 (L)1GABA10.3%0.0
AMMC019 (L)1GABA10.3%0.0
AMMC006 (R)1Glu10.3%0.0
CB1145 (L)1GABA10.3%0.0
LHPV3b1_a (L)1ACh10.3%0.0
M_lvPNm48 (L)1ACh10.3%0.0
WED091 (L)1ACh10.3%0.0
CB2963 (L)1ACh10.3%0.0
WEDPN8D (L)1ACh10.3%0.0
LHPV2a1_c (L)1GABA10.3%0.0
PLP026 (L)1GABA10.3%0.0
LHAD1f3_a (L)1Glu10.3%0.0
WED025 (L)1GABA10.3%0.0
CB3631 (R)1ACh10.3%0.0
WED089 (L)1ACh10.3%0.0
GNG461 (R)1GABA10.3%0.0
WEDPN10A (R)1GABA10.3%0.0
WEDPN5 (L)1GABA10.3%0.0
WEDPN6B (L)1GABA10.3%0.0
PLP247 (L)1Glu10.3%0.0
CB4176 (L)1GABA10.3%0.0
GNG312 (L)1Glu10.3%0.0
PLP096 (L)1ACh10.3%0.0
DNb08 (L)1ACh10.3%0.0
PLP209 (L)1ACh10.3%0.0
ATL030 (R)1Glu10.3%0.0
PVLP151 (L)1ACh10.3%0.0
AN02A001 (L)1Glu10.3%0.0
LAL156_a (L)1ACh10.3%0.0
AVLP086 (L)1GABA10.3%0.0
LT36 (R)1GABA10.3%0.0
OA-VUMa6 (M)1OA10.3%0.0
MeVP28 (L)1ACh10.3%0.0
PVLP010 (L)1Glu10.3%0.0