Male CNS – Cell Type Explorer

CB1407

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
943
Total Synapses
Right: 485 | Left: 458
log ratio : -0.08
471.5
Mean Synapses
Right: 485 | Left: 458
log ratio : -0.08
ACh(84.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WED34273.9%-0.4225553.1%
PLP6714.5%1.6521043.8%
SAD316.7%-2.1571.5%
AMMC163.5%-2.4230.6%
CentralBrain-unspecified40.9%-1.0020.4%
VES00.0%inf30.6%
LH20.4%-inf00.0%
SIP10.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1407
%
In
CV
AMMC0112ACh36.516.8%0.0
WEDPN8C11ACh15.57.1%0.7
ATL0302Glu12.55.7%0.0
WED2016GABA10.54.8%0.8
WED166_a3ACh104.6%0.4
JO-C/D/E6ACh6.53.0%0.5
WEDPN8B4ACh6.53.0%0.4
AMMC0122ACh6.53.0%0.0
WEDPN17_a15ACh6.53.0%0.3
WED1013Glu5.52.5%0.5
LHPV6q11unc52.3%0.0
AN06B0092GABA4.52.1%0.0
CB12687ACh41.8%0.2
LAL1312Glu41.8%0.0
WED143_a1ACh3.51.6%0.0
WEDPN112Glu3.51.6%0.0
CB28732Glu31.4%0.7
ALIN21ACh2.51.1%0.0
WEDPN8D3ACh2.51.1%0.6
PPM12023DA2.51.1%0.2
WED1811ACh20.9%0.0
CB11452GABA20.9%0.5
AN07B0362ACh20.9%0.0
WEDPN10A2GABA20.9%0.0
CB37382GABA20.9%0.0
WED1633ACh20.9%0.0
CB13391ACh1.50.7%0.0
CB26531Glu1.50.7%0.0
CB15041Glu1.50.7%0.0
PLP0101Glu1.50.7%0.0
CB34371ACh1.50.7%0.0
AMMC0301GABA1.50.7%0.0
CB33201GABA1.50.7%0.0
SAD112_b1GABA1.50.7%0.0
WEDPN17_b2ACh1.50.7%0.3
PLP2472Glu1.50.7%0.0
CB36732ACh1.50.7%0.0
AVLP0862GABA1.50.7%0.0
CB15332ACh1.50.7%0.0
CB21531ACh10.5%0.0
LAL132_a1Glu10.5%0.0
CB37601Glu10.5%0.0
WEDPN141ACh10.5%0.0
WEDPN91ACh10.5%0.0
CB37391GABA10.5%0.0
CB37461GABA10.5%0.0
SAD112_c1GABA10.5%0.0
M_lPNm11A2ACh10.5%0.0
SMP1452unc10.5%0.0
CB37452GABA10.5%0.0
WED166_d2ACh10.5%0.0
SAD0302GABA10.5%0.0
AMMC0312GABA10.5%0.0
WEDPN52GABA10.5%0.0
5-HTPMPV0325-HT10.5%0.0
WED0941Glu0.50.2%0.0
M_lv2PN9t49_b1GABA0.50.2%0.0
WED0041ACh0.50.2%0.0
LAL1891ACh0.50.2%0.0
SAD0031ACh0.50.2%0.0
CB24311GABA0.50.2%0.0
CB37591Glu0.50.2%0.0
WEDPN7C1ACh0.50.2%0.0
WEDPN6A1GABA0.50.2%0.0
LHPV2a1_c1GABA0.50.2%0.0
WEDPN17_a21ACh0.50.2%0.0
AMMC0081Glu0.50.2%0.0
WEDPN1A1GABA0.50.2%0.0
LHPV2a1_d1GABA0.50.2%0.0
ATL0411ACh0.50.2%0.0
WED0701unc0.50.2%0.0
VP4+VL1_l2PN1ACh0.50.2%0.0
LAL1831ACh0.50.2%0.0
PPL2021DA0.50.2%0.0
SAD112_a1GABA0.50.2%0.0
CB37471GABA0.50.2%0.0
SAD1111GABA0.50.2%0.0
DNp561ACh0.50.2%0.0
WED0311GABA0.50.2%0.0
WED1221GABA0.50.2%0.0
CB10231Glu0.50.2%0.0
CB37981GABA0.50.2%0.0
CB42281ACh0.50.2%0.0
SAD0801Glu0.50.2%0.0
WED0911ACh0.50.2%0.0
CB36311ACh0.50.2%0.0
CB40941ACh0.50.2%0.0
LoVP501ACh0.50.2%0.0
DNge138 (M)1unc0.50.2%0.0
AVLP0791GABA0.50.2%0.0
WED2031GABA0.50.2%0.0
OA-VUMa6 (M)1OA0.50.2%0.0

Outputs

downstream
partner
#NTconns
CB1407
%
Out
CV
WED1458ACh286.1%0.5
WED0346Glu224.8%0.6
LHAV2b45ACh194.1%0.6
PLP0396Glu183.9%0.6
LHPV2g14ACh14.53.1%0.1
PLP0972ACh14.53.1%0.0
WEDPN2A5GABA10.52.3%0.1
WED2015GABA102.2%0.5
CB12687ACh9.52.1%0.3
WED143_a6ACh9.52.1%0.8
WED0578GABA8.51.8%0.5
WEDPN8C9ACh81.7%0.4
WED143_b4ACh7.51.6%0.1
WED0046ACh7.51.6%0.4
CB37394GABA7.51.6%0.5
CB11485Glu71.5%0.5
LHCENT42Glu6.51.4%0.0
CB37594Glu61.3%0.5
WED1942GABA61.3%0.0
CB40943ACh61.3%0.3
WED0355Glu61.3%0.5
ATL0302Glu61.3%0.0
LHAV2g62ACh51.1%0.0
WED143_c3ACh51.1%0.2
WED1647ACh51.1%0.3
WEDPN8B5ACh4.51.0%0.2
CB02242GABA40.9%0.0
PLP2571GABA3.50.8%0.0
WEDPN143ACh3.50.8%0.5
WED0892ACh3.50.8%0.0
WED0263GABA3.50.8%0.2
LHPV2a1_d2GABA3.50.8%0.0
SAD1163Glu3.50.8%0.2
ATL0142Glu3.50.8%0.0
PLP0283unc3.50.8%0.2
LHAV2b11ACh30.6%0.0
WED0563GABA30.6%0.4
LHPV3b1_a4ACh30.6%0.2
WEDPN10B2GABA30.6%0.0
WEDPN34GABA30.6%0.0
WEDPN7C3ACh30.6%0.2
CL0561GABA2.50.5%0.0
WED1991GABA2.50.5%0.0
M_lv2PN9t49_a1GABA2.50.5%0.0
WED1681ACh2.50.5%0.0
CB28813Glu2.50.5%0.0
WED1634ACh2.50.5%0.3
WED0802GABA2.50.5%0.0
WEDPN112Glu2.50.5%0.0
WED0943Glu2.50.5%0.2
CB2081_a3ACh2.50.5%0.2
WEDPN1A4GABA2.50.5%0.0
ATL0411ACh20.4%0.0
AMMC0281GABA20.4%0.0
WEDPN121Glu20.4%0.0
CB30562Glu20.4%0.5
CB30132unc20.4%0.5
WED0322GABA20.4%0.5
PLP2472Glu20.4%0.0
CB42002ACh20.4%0.0
PLP2092ACh20.4%0.0
WEDPN8D3ACh20.4%0.2
WEDPN6A3GABA20.4%0.2
WEDPN7A4ACh20.4%0.0
CB37451GABA1.50.3%0.0
LoVP501ACh1.50.3%0.0
WED0701unc1.50.3%0.0
SAD0131GABA1.50.3%0.0
LAL1251Glu1.50.3%0.0
LAL1381GABA1.50.3%0.0
PLP2211ACh1.50.3%0.0
LHPV2d11GABA1.50.3%0.0
M_l2PNl221ACh1.50.3%0.0
M_l2PNl201ACh1.50.3%0.0
CB23092ACh1.50.3%0.3
LHAV2g52ACh1.50.3%0.3
CB15332ACh1.50.3%0.0
WED0022ACh1.50.3%0.0
LHPV2a1_c2GABA1.50.3%0.0
AVLP0862GABA1.50.3%0.0
CB18182ACh1.50.3%0.0
WEDPN42GABA1.50.3%0.0
WEDPN6B3GABA1.50.3%0.0
CB27133ACh1.50.3%0.0
CB12133ACh1.50.3%0.0
WED1441ACh10.2%0.0
WED0721ACh10.2%0.0
WEDPN181ACh10.2%0.0
WEDPN17_b1ACh10.2%0.0
WED0971Glu10.2%0.0
CB24941ACh10.2%0.0
LHPV2a1_e1GABA10.2%0.0
WED1221GABA10.2%0.0
CRE0761ACh10.2%0.0
DNge1401ACh10.2%0.0
DNg321ACh10.2%0.0
DNp1031ACh10.2%0.0
CB15041Glu10.2%0.0
SLP3141Glu10.2%0.0
PLP1161Glu10.2%0.0
PLP2451ACh10.2%0.0
CL0541GABA10.2%0.0
CB33811GABA10.2%0.0
LHPV3a11ACh10.2%0.0
WED1291ACh10.2%0.0
VES0011Glu10.2%0.0
PPM12021DA10.2%0.0
CB04401ACh10.2%0.0
WED0691ACh10.2%0.0
AMMC0121ACh10.2%0.0
WED2031GABA10.2%0.0
CB14642ACh10.2%0.0
OA-VUMa6 (M)1OA10.2%0.0
SAD0302GABA10.2%0.0
WED1012Glu10.2%0.0
M_lPNm11A2ACh10.2%0.0
AMMC0192GABA10.2%0.0
PLP0262GABA10.2%0.0
CB11452GABA10.2%0.0
CB09862GABA10.2%0.0
WEDPN10A2GABA10.2%0.0
WED0311GABA0.50.1%0.0
SMP371_a1Glu0.50.1%0.0
CB36821ACh0.50.1%0.0
WED166_a1ACh0.50.1%0.0
PS3591ACh0.50.1%0.0
M_lv2PN9t49_b1GABA0.50.1%0.0
WEDPN7B1ACh0.50.1%0.0
CB18491ACh0.50.1%0.0
CB15641ACh0.50.1%0.0
LAL188_b1ACh0.50.1%0.0
CB29501ACh0.50.1%0.0
SAD0091ACh0.50.1%0.0
PLP0461Glu0.50.1%0.0
CB37601Glu0.50.1%0.0
CB37381GABA0.50.1%0.0
CB15031Glu0.50.1%0.0
PLP0101Glu0.50.1%0.0
SAD0011ACh0.50.1%0.0
CB24401GABA0.50.1%0.0
WEDPN17_a21ACh0.50.1%0.0
WEDPN2B_b1GABA0.50.1%0.0
SAD0031ACh0.50.1%0.0
ALIN21ACh0.50.1%0.0
AMMC0261GABA0.50.1%0.0
PS2611ACh0.50.1%0.0
PLP0811Glu0.50.1%0.0
DNp51,DNpe0191ACh0.50.1%0.0
LHAD2b11ACh0.50.1%0.0
M_l2PN10t191ACh0.50.1%0.0
WEDPN91ACh0.50.1%0.0
LAL1831ACh0.50.1%0.0
CRE0741Glu0.50.1%0.0
AN06B0091GABA0.50.1%0.0
LHPV10b11ACh0.50.1%0.0
CB30641GABA0.50.1%0.0
WED030_a1GABA0.50.1%0.0
AMMC0311GABA0.50.1%0.0
CB12021ACh0.50.1%0.0
WED0121GABA0.50.1%0.0
DNp561ACh0.50.1%0.0
PS1571GABA0.50.1%0.0
MBON161ACh0.50.1%0.0
WED2001GABA0.50.1%0.0
CB33161ACh0.50.1%0.0
CB13001ACh0.50.1%0.0
LHPV5b31ACh0.50.1%0.0
AOTU0341ACh0.50.1%0.0
CB24311GABA0.50.1%0.0
WED0931ACh0.50.1%0.0
WED1971GABA0.50.1%0.0
SAD0111GABA0.50.1%0.0
PLP0431Glu0.50.1%0.0
AMMC0061Glu0.50.1%0.0
M_lvPNm481ACh0.50.1%0.0
WED0911ACh0.50.1%0.0
CB29631ACh0.50.1%0.0
LHAD1f3_a1Glu0.50.1%0.0
WED0251GABA0.50.1%0.0
CB36311ACh0.50.1%0.0
GNG4611GABA0.50.1%0.0
WEDPN51GABA0.50.1%0.0
CB41761GABA0.50.1%0.0
GNG3121Glu0.50.1%0.0
PLP0961ACh0.50.1%0.0
DNb081ACh0.50.1%0.0
PVLP1511ACh0.50.1%0.0
AN02A0011Glu0.50.1%0.0
LAL156_a1ACh0.50.1%0.0
LT361GABA0.50.1%0.0
MeVP281ACh0.50.1%0.0
PVLP0101Glu0.50.1%0.0