Male CNS – Cell Type Explorer

CB1394_a[PC]

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
2,250
Total Synapses
Right: 1,115 | Left: 1,135
log ratio : 0.03
562.5
Mean Synapses
Right: 557.5 | Left: 567.5
log ratio : 0.03
Glu(82.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WED35621.9%0.7359294.7%
AMMC89154.8%-7.4850.8%
SAD20012.3%-inf00.0%
CentralBrain-unspecified804.9%-inf00.0%
CAN483.0%-inf00.0%
VES342.1%-5.0910.2%
PLP130.8%0.47182.9%
SPS30.2%1.5891.4%

Connectivity

Inputs

upstream
partner
#NTconns
CB1394_a
%
In
CV
JO-C/D/E60ACh105.529.8%0.8
5-HTPMPV0325-HT29.88.4%0.0
SAD1104GABA246.8%0.1
LAL156_a2ACh20.85.9%0.0
WED2032GABA19.85.6%0.0
WED1459ACh14.84.2%0.6
CB03902GABA10.83.0%0.0
AN27X0082HA9.22.6%0.0
WED0842GABA8.52.4%0.0
AMMC0284GABA7.22.1%0.3
AMMC0122ACh72.0%0.0
WED0832GABA6.51.8%0.0
LPT542ACh51.4%0.0
SMP4572ACh51.4%0.0
AMMC0331GABA3.51.0%0.0
DNge138 (M)2unc3.51.0%0.4
CB36733ACh2.80.8%0.0
LPT212ACh2.50.7%0.0
CB34372ACh2.20.6%0.0
AMMC0253GABA20.6%0.5
PPM12022DA20.6%0.0
CB1394_b4Glu20.6%0.5
CB19802ACh1.80.5%0.0
CB02281Glu1.50.4%0.0
AMMC0062Glu1.50.4%0.0
GNG4543Glu1.50.4%0.4
AN19B0242ACh1.50.4%0.0
PLP2602unc1.50.4%0.0
LAL156_b2ACh1.50.4%0.0
SMP371_a1Glu1.20.4%0.0
OA-VUMa4 (M)2OA1.20.4%0.2
CB25582ACh1.20.4%0.0
WED1574ACh1.20.4%0.2
WED0801GABA10.3%0.0
CB25852ACh10.3%0.5
SAD0793Glu10.3%0.4
PLP2562Glu10.3%0.0
WED0574GABA10.3%0.0
PS1921Glu0.80.2%0.0
DNpe0551ACh0.80.2%0.0
AMMC0081Glu0.80.2%0.0
AMMC0261GABA0.80.2%0.0
DNp381ACh0.80.2%0.0
WED1442ACh0.80.2%0.3
LAL304m2ACh0.80.2%0.3
CB09862GABA0.80.2%0.0
LAL0722Glu0.80.2%0.0
PS1262ACh0.80.2%0.0
LPT312ACh0.80.2%0.0
WED0372Glu0.80.2%0.0
WED1023Glu0.80.2%0.0
WED1552ACh0.80.2%0.0
LPT1111GABA0.50.1%0.0
GNG5361ACh0.50.1%0.0
WED0821GABA0.50.1%0.0
WED1811ACh0.50.1%0.0
CB04321Glu0.50.1%0.0
OA-AL2i41OA0.50.1%0.0
GNG4941ACh0.50.1%0.0
AN09A0051unc0.50.1%0.0
CB26531Glu0.50.1%0.0
WED1821ACh0.50.1%0.0
LoVCLo31OA0.50.1%0.0
AN06B0901GABA0.50.1%0.0
CB37452GABA0.50.1%0.0
WED0081ACh0.50.1%0.0
AN07B0041ACh0.50.1%0.0
LAL2031ACh0.50.1%0.0
PS0372ACh0.50.1%0.0
PS2202ACh0.50.1%0.0
WED1652ACh0.50.1%0.0
PLP0932ACh0.50.1%0.0
PS2302ACh0.50.1%0.0
AMMC0132ACh0.50.1%0.0
CB10472ACh0.50.1%0.0
WED0382Glu0.50.1%0.0
OLVC52ACh0.50.1%0.0
DNpe0051ACh0.20.1%0.0
PS1381GABA0.20.1%0.0
DNg1061GABA0.20.1%0.0
PLP2171ACh0.20.1%0.0
CB1394_a1Glu0.20.1%0.0
WED1831Glu0.20.1%0.0
AMMC0311GABA0.20.1%0.0
WED1031Glu0.20.1%0.0
WED040_a1Glu0.20.1%0.0
CB24311GABA0.20.1%0.0
WEDPN141ACh0.20.1%0.0
CB2081_b1ACh0.20.1%0.0
CB19421GABA0.20.1%0.0
LAL1661ACh0.20.1%0.0
LAL0251ACh0.20.1%0.0
WEDPN91ACh0.20.1%0.0
PLP0321ACh0.20.1%0.0
SAD1111GABA0.20.1%0.0
WED1531ACh0.20.1%0.0
OA-VUMa1 (M)1OA0.20.1%0.0
SAD0931ACh0.20.1%0.0
CB15851ACh0.20.1%0.0
WED0021ACh0.20.1%0.0
CB13391ACh0.20.1%0.0
CB13221ACh0.20.1%0.0
WED1291ACh0.20.1%0.0
CB12991ACh0.20.1%0.0
CB40381ACh0.20.1%0.0
WED0171ACh0.20.1%0.0
PS3261Glu0.20.1%0.0
DNb091Glu0.20.1%0.0
aSP221ACh0.20.1%0.0
CB20501ACh0.20.1%0.0
AMMC0141ACh0.20.1%0.0
CB28551ACh0.20.1%0.0
OA-VPM31OA0.20.1%0.0
WED0291GABA0.20.1%0.0
CB37591Glu0.20.1%0.0
CB37341ACh0.20.1%0.0
WED0951Glu0.20.1%0.0
AMMC0211GABA0.20.1%0.0
OCC01b1ACh0.20.1%0.0
SAD112_a1GABA0.20.1%0.0
LoVC181DA0.20.1%0.0
LHPV6q11unc0.20.1%0.0
LAL1381GABA0.20.1%0.0
DNp271ACh0.20.1%0.0
WED1841GABA0.20.1%0.0
SMP1451unc0.20.1%0.0
AMMC0031GABA0.20.1%0.0
LAL132_a1Glu0.20.1%0.0
CB25011ACh0.20.1%0.0
CB15991ACh0.20.1%0.0
GNG2671ACh0.20.1%0.0
CL2881GABA0.20.1%0.0
LAL1391GABA0.20.1%0.0
AMMC0301GABA0.20.1%0.0
WED0701unc0.20.1%0.0
Nod11ACh0.20.1%0.0
CB02141GABA0.20.1%0.0
SAD0781unc0.20.1%0.0
AN19B0191ACh0.20.1%0.0

Outputs

downstream
partner
#NTconns
CB1394_a
%
Out
CV
WED05718GABA112.526.4%0.5
WED1842GABA36.58.6%0.0
LAL304m5ACh23.55.5%0.4
WED0702unc214.9%0.0
CL2882GABA163.8%0.0
CB05402GABA15.23.6%0.0
PS0572Glu11.52.7%0.0
FB6M4Glu9.82.3%0.1
CB25856ACh81.9%0.7
FB2A4DA81.9%0.6
CB2081_b4ACh6.21.5%0.4
WED0286GABA5.81.3%0.5
WEDPN146ACh5.81.3%0.5
5-HTPMPV0325-HT5.81.3%0.0
DNp542GABA5.51.3%0.0
WED1455ACh5.21.2%0.9
PLP2162GABA5.21.2%0.0
PS0882GABA4.81.1%0.0
DNbe0012ACh4.81.1%0.0
WED0565GABA4.21.0%0.5
SIP0862Glu40.9%0.0
PS1924Glu40.9%0.7
CB10474ACh3.80.9%0.6
LAL156_a2ACh30.7%0.0
CB41044ACh2.50.6%0.5
PLP0221GABA20.5%0.0
PS2342ACh20.5%0.0
PLP301m2ACh20.5%0.0
WED0162ACh20.5%0.0
AMMC0154GABA20.5%0.5
WED1673ACh1.80.4%0.2
SAD0072ACh1.80.4%0.0
WED2032GABA1.80.4%0.0
CB12683ACh1.80.4%0.2
OA-VUMa1 (M)2OA1.50.4%0.3
WED0384Glu1.50.4%0.2
CB2081_a3ACh1.50.4%0.0
CB32042ACh1.50.4%0.0
PS2601ACh1.20.3%0.0
CB14771ACh1.20.3%0.0
WEDPN7A2ACh1.20.3%0.2
CB41052ACh1.20.3%0.0
WEDPN8D3ACh1.20.3%0.3
WEDPN183ACh1.20.3%0.0
CB29504ACh1.20.3%0.3
PS1912Glu1.20.3%0.0
PLP2602unc1.20.3%0.0
CB02242GABA1.20.3%0.0
CB1394_b4Glu1.20.3%0.2
WED0353Glu1.20.3%0.2
LPT1133GABA1.20.3%0.2
CB13223ACh1.20.3%0.2
PLP1731GABA10.2%0.0
PLP0231GABA10.2%0.0
CB09863GABA10.2%0.4
LPT1163GABA10.2%0.4
DNge138 (M)1unc10.2%0.0
WEDPN7C2ACh10.2%0.0
WED1293ACh10.2%0.0
LAL156_b2ACh10.2%0.0
CB34531GABA0.80.2%0.0
CB20371ACh0.80.2%0.0
WEDPN17_a21ACh0.80.2%0.0
PS2301ACh0.80.2%0.0
LAL1421GABA0.80.2%0.0
PLP1631ACh0.80.2%0.0
WED1532ACh0.80.2%0.3
LPT312ACh0.80.2%0.3
PLP0921ACh0.80.2%0.0
SAD0491ACh0.80.2%0.0
WED0421ACh0.80.2%0.0
WED1221GABA0.80.2%0.0
CB29401ACh0.80.2%0.0
CB31401ACh0.80.2%0.0
WED1212GABA0.80.2%0.0
WED0782GABA0.80.2%0.0
WED0802GABA0.80.2%0.0
WED0393Glu0.80.2%0.0
LAL1972ACh0.80.2%0.0
DNpe0052ACh0.80.2%0.0
CB24943ACh0.80.2%0.0
WED1551ACh0.50.1%0.0
CB27131ACh0.50.1%0.0
WEDPN8C1ACh0.50.1%0.0
CB00861GABA0.50.1%0.0
CB14641ACh0.50.1%0.0
CB37581Glu0.50.1%0.0
CB37591Glu0.50.1%0.0
LAL133_d1Glu0.50.1%0.0
LAL0551ACh0.50.1%0.0
WED1301ACh0.50.1%0.0
CB19801ACh0.50.1%0.0
CB36821ACh0.50.1%0.0
SAD0761Glu0.50.1%0.0
CB36731ACh0.50.1%0.0
M_lv2PN9t49_a1GABA0.50.1%0.0
SAD0131GABA0.50.1%0.0
pIP11ACh0.50.1%0.0
WED0962Glu0.50.1%0.0
WED1022Glu0.50.1%0.0
PLP1161Glu0.50.1%0.0
LAL1311Glu0.50.1%0.0
WED0952Glu0.50.1%0.0
WED0022ACh0.50.1%0.0
SAD0032ACh0.50.1%0.0
WED0082ACh0.50.1%0.0
LPT1122GABA0.50.1%0.0
WED1572ACh0.50.1%0.0
WED0792GABA0.50.1%0.0
WED143_c1ACh0.20.1%0.0
LAL133_b1Glu0.20.1%0.0
DNg92_a1ACh0.20.1%0.0
CB31321ACh0.20.1%0.0
PS2691ACh0.20.1%0.0
GNG4541Glu0.20.1%0.0
WED0771GABA0.20.1%0.0
CB15041Glu0.20.1%0.0
PLP0371Glu0.20.1%0.0
WED0121GABA0.20.1%0.0
PS2401ACh0.20.1%0.0
WED0841GABA0.20.1%0.0
WEDPN10B1GABA0.20.1%0.0
PLP1701Glu0.20.1%0.0
PS347_b1Glu0.20.1%0.0
LAL1571ACh0.20.1%0.0
PLP0781Glu0.20.1%0.0
WEDPN6C1GABA0.20.1%0.0
CB15851ACh0.20.1%0.0
ER1_b1GABA0.20.1%0.0
CB19831ACh0.20.1%0.0
CB19141ACh0.20.1%0.0
LAL1891ACh0.20.1%0.0
CB11451GABA0.20.1%0.0
LoVC181DA0.20.1%0.0
OA-VUMa4 (M)1OA0.20.1%0.0
WED030_a1GABA0.20.1%0.0
WED2011GABA0.20.1%0.0
WED0291GABA0.20.1%0.0
LoVC271Glu0.20.1%0.0
CB25011ACh0.20.1%0.0
WED1681ACh0.20.1%0.0
CB29531Glu0.20.1%0.0
PS2521ACh0.20.1%0.0
CL0531ACh0.20.1%0.0
PS2421ACh0.20.1%0.0
WEDPN51GABA0.20.1%0.0
WED0721ACh0.20.1%0.0
PVLP0151Glu0.20.1%0.0
SAD0101ACh0.20.1%0.0
DNp271ACh0.20.1%0.0
CB13391ACh0.20.1%0.0
LAL188_a1ACh0.20.1%0.0
WED1031Glu0.20.1%0.0
LAL0221ACh0.20.1%0.0
LAL133_c1Glu0.20.1%0.0
AMMC0271GABA0.20.1%0.0
PS0371ACh0.20.1%0.0
CB1394_a1Glu0.20.1%0.0
WED020_a1ACh0.20.1%0.0
CB22461ACh0.20.1%0.0
CB15991ACh0.20.1%0.0
SMP2931ACh0.20.1%0.0
LAL060_b1GABA0.20.1%0.0
SAD0771Glu0.20.1%0.0
SAD0781unc0.20.1%0.0
WED0071ACh0.20.1%0.0
LPT1141GABA0.20.1%0.0
PLP300m1ACh0.20.1%0.0
LAL2031ACh0.20.1%0.0
DNp381ACh0.20.1%0.0