Male CNS – Cell Type Explorer

CB1356(R)

3
Total Neurons
Right: 1 | Left: 2
log ratio : 1.00
981
Total Synapses
Post: 715 | Pre: 266
log ratio : -1.43
981
Mean Synapses
Post: 715 | Pre: 266
log ratio : -1.43
ACh(94.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
PLP(R)48167.3%-1.4817365.0%
WED(R)15421.5%-0.987829.3%
SPS(R)263.6%-1.8972.6%
CentralBrain-unspecified142.0%-1.8141.5%
AMMC(R)142.0%-inf00.0%
AVLP(R)121.7%-3.5810.4%
IPS(R)60.8%-1.0031.1%
GNG40.6%-inf00.0%
SAD40.6%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1356
%
In
CV
LLPC3 (R)63ACh12718.3%0.7
LLPC2 (R)33ACh9213.3%0.8
LPT26 (R)1ACh537.6%0.0
LPT30 (R)1ACh527.5%0.0
Nod1 (L)2ACh507.2%0.2
AN19B019 (L)1ACh395.6%0.0
PLP035 (R)1Glu324.6%0.0
CB2246 (R)4ACh172.4%0.5
LLPC1 (R)7ACh172.4%0.5
WED042 (R)4ACh162.3%0.4
CB1654 (R)1ACh121.7%0.0
LPT116 (R)3GABA111.6%0.7
AN19B017 (L)1ACh101.4%0.0
CB3209 (R)1ACh91.3%0.0
PLP256 (R)1Glu81.2%0.0
PLP173 (R)1GABA71.0%0.0
AN02A025 (R)1Glu71.0%0.0
PLP032 (L)1ACh60.9%0.0
PLP032 (R)1ACh60.9%0.0
WED038 (R)3Glu60.9%0.4
LPT31 (R)3ACh60.9%0.4
LPT114 (R)2GABA60.9%0.0
DNpe005 (R)1ACh50.7%0.0
CB2227 (R)1ACh50.7%0.0
WED122 (R)1GABA40.6%0.0
PLP259 (L)1unc40.6%0.0
PLP019 (R)1GABA40.6%0.0
DNpe005 (L)1ACh40.6%0.0
LPT27 (R)1ACh40.6%0.0
WED041 (R)2Glu40.6%0.5
WED074 (L)2GABA40.6%0.0
PS077 (R)1GABA30.4%0.0
LLPC_unclear (R)1ACh30.4%0.0
PS326 (L)2Glu30.4%0.3
LC36 (R)1ACh20.3%0.0
LPT100 (R)1ACh20.3%0.0
WED017 (R)1ACh20.3%0.0
CB2855 (R)1ACh20.3%0.0
PLP142 (R)1GABA20.3%0.0
AN19B049 (L)1ACh20.3%0.0
DNp07 (R)1ACh20.3%0.0
AOTU052 (R)1GABA20.3%0.0
5-HTPMPV03 (L)15-HT20.3%0.0
5-HTPMPV03 (R)15-HT20.3%0.0
PLP103 (R)2ACh20.3%0.0
PS176 (R)1Glu10.1%0.0
DNp27 (L)1ACh10.1%0.0
PS138 (R)1GABA10.1%0.0
PS304 (R)1GABA10.1%0.0
WED103 (R)1Glu10.1%0.0
PLP217 (R)1ACh10.1%0.0
CB2694 (R)1Glu10.1%0.0
PS023 (R)1ACh10.1%0.0
PS268 (R)1ACh10.1%0.0
CB1980 (L)1ACh10.1%0.0
CB1322 (L)1ACh10.1%0.0
CB2585 (L)1ACh10.1%0.0
AN18B053 (L)1ACh10.1%0.0
WED128 (R)1ACh10.1%0.0
WED010 (R)1ACh10.1%0.0
GNG435 (R)1Glu10.1%0.0
LAL050 (R)1GABA10.1%0.0
WEDPN7C (R)1ACh10.1%0.0
PLP101 (R)1ACh10.1%0.0
WED024 (R)1GABA10.1%0.0
CB0986 (R)1GABA10.1%0.0
PLP139 (R)1Glu10.1%0.0
PLP230 (L)1ACh10.1%0.0
CB2963 (R)1ACh10.1%0.0
PLP170 (R)1Glu10.1%0.0
GNG461 (L)1GABA10.1%0.0
PLP262 (R)1ACh10.1%0.0
CB0086 (R)1GABA10.1%0.0
PLP196 (R)1ACh10.1%0.0
CB1055 (L)1GABA10.1%0.0
PLP177 (R)1ACh10.1%0.0
LoVC19 (R)1ACh10.1%0.0
PLP078 (L)1Glu10.1%0.0
OA-VUMa4 (M)1OA10.1%0.0
OA-AL2i4 (R)1OA10.1%0.0
Nod4 (L)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
CB1356
%
Out
CV
CB1322 (R)5ACh548.9%0.3
PLP023 (R)2GABA477.8%0.2
PS058 (R)1ACh467.6%0.0
OLVC1 (R)1ACh264.3%0.0
PLP022 (R)1GABA244.0%0.0
WED038 (R)6Glu244.0%0.8
CB1983 (R)3ACh203.3%0.9
PLP196 (R)1ACh183.0%0.0
PLP216 (R)1GABA183.0%0.0
PLP260 (R)1unc172.8%0.0
WED074 (L)2GABA162.6%0.2
PLP025 (R)4GABA162.6%0.2
CB2246 (R)4ACh152.5%0.2
PLP150 (R)2ACh122.0%0.7
WED042 (R)5ACh122.0%0.7
PLP116 (R)1Glu111.8%0.0
WED132 (R)2ACh111.8%0.6
WED182 (R)1ACh81.3%0.0
PLP248 (R)1Glu81.3%0.0
WED077 (R)2GABA81.3%0.8
WED143_d (R)2ACh81.3%0.5
PLP037 (R)2Glu81.3%0.5
WED028 (R)2GABA81.3%0.0
PLP214 (R)1Glu71.2%0.0
PLP256 (R)1Glu61.0%0.0
PLP096 (R)1ACh50.8%0.0
PS252 (R)1ACh50.8%0.0
CB2503 (R)1ACh50.8%0.0
AOTU051 (R)1GABA50.8%0.0
ATL021 (R)1Glu50.8%0.0
OLVC1 (L)1ACh50.8%0.0
CB1322 (L)4ACh50.8%0.3
PLP217 (R)1ACh40.7%0.0
GNG536 (R)1ACh40.7%0.0
PS182 (R)1ACh40.7%0.0
CB3140 (R)2ACh40.7%0.5
LoVP91 (R)1GABA30.5%0.0
WED184 (R)1GABA30.5%0.0
PLP063 (R)1ACh30.5%0.0
AOTU053 (R)1GABA30.5%0.0
CB3209 (R)1ACh30.5%0.0
AOTU043 (R)1ACh30.5%0.0
WEDPN7B (R)1ACh30.5%0.0
PS180 (R)1ACh30.5%0.0
WED006 (R)1GABA30.5%0.0
GNG315 (R)1GABA30.5%0.0
DNge107 (R)1GABA30.5%0.0
CB1980 (R)2ACh30.5%0.3
WED037 (R)2Glu30.5%0.3
CB1654 (R)2ACh30.5%0.3
WED143_a (R)1ACh20.3%0.0
WED143_c (R)1ACh20.3%0.0
WED085 (R)1GABA20.3%0.0
WED122 (R)1GABA20.3%0.0
WED165 (R)1ACh20.3%0.0
WED008 (R)1ACh20.3%0.0
PLP004 (R)1Glu20.3%0.0
CB0540 (R)1GABA20.3%0.0
DNp54 (R)1GABA20.3%0.0
LPT111 (R)2GABA20.3%0.0
DNpe005 (R)1ACh10.2%0.0
CB2294 (L)1ACh10.2%0.0
AOTU050 (R)1GABA10.2%0.0
AOTU050 (L)1GABA10.2%0.0
ATL016 (R)1Glu10.2%0.0
PS269 (R)1ACh10.2%0.0
WED103 (R)1Glu10.2%0.0
CB1983 (L)1ACh10.2%0.0
SpsP (R)1Glu10.2%0.0
CB2494 (L)1ACh10.2%0.0
CB2294 (R)1ACh10.2%0.0
PLP111 (R)1ACh10.2%0.0
PLP102 (R)1ACh10.2%0.0
CB3343 (R)1ACh10.2%0.0
CB2227 (R)1ACh10.2%0.0
LLPC2 (R)1ACh10.2%0.0
PLP101 (R)1ACh10.2%0.0
WED075 (R)1GABA10.2%0.0
PLP139 (R)1Glu10.2%0.0
WED079 (R)1GABA10.2%0.0
LLPC1 (R)1ACh10.2%0.0
CB0640 (R)1ACh10.2%0.0
FB6M (R)1Glu10.2%0.0
WED078 (R)1GABA10.2%0.0
LPT116 (R)1GABA10.2%0.0
PLP262 (R)1ACh10.2%0.0
PLP081 (R)1Glu10.2%0.0
PS178 (R)1GABA10.2%0.0
CL288 (R)1GABA10.2%0.0
CB0086 (R)1GABA10.2%0.0
PLP301m (L)1ACh10.2%0.0
IB058 (R)1Glu10.2%0.0
LAL139 (R)1GABA10.2%0.0
LAL158 (R)1ACh10.2%0.0
LPT114 (R)1GABA10.2%0.0
LAL203 (R)1ACh10.2%0.0
GNG544 (L)1ACh10.2%0.0
AN06B011 (L)1ACh10.2%0.0
PS156 (R)1GABA10.2%0.0
PLP032 (L)1ACh10.2%0.0
LoVC19 (R)1ACh10.2%0.0
AN19B017 (L)1ACh10.2%0.0
PLP092 (R)1ACh10.2%0.0
PS088 (L)1GABA10.2%0.0
aMe_TBD1 (R)1GABA10.2%0.0