Male CNS – Cell Type Explorer

CB1346(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,341
Total Synapses
Post: 943 | Pre: 398
log ratio : -1.24
1,341
Mean Synapses
Post: 943 | Pre: 398
log ratio : -1.24
ACh(92.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(L)69173.3%-1.8619047.7%
SMP(R)15116.0%0.4320351.0%
SIP(L)768.1%-inf00.0%
SLP(L)151.6%-inf00.0%
CentralBrain-unspecified40.4%-2.0010.3%
SIP(R)10.1%2.0041.0%
PLP(L)30.3%-inf00.0%
PVLP(L)20.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1346
%
In
CV
GNG121 (R)1GABA465.2%0.0
SMP535 (L)2Glu394.4%0.7
SMP344 (L)2Glu333.7%0.2
SMP501 (R)2Glu252.8%0.2
PRW060 (R)1Glu232.6%0.0
FS3_d (R)10ACh202.3%0.6
PRW060 (L)1Glu192.1%0.0
CB1009 (L)1unc182.0%0.0
SMP217 (L)2Glu182.0%0.6
SMP368 (R)1ACh171.9%0.0
SMP217 (R)3Glu171.9%0.6
SMP083 (R)2Glu161.8%0.2
SMP306 (L)2GABA151.7%0.2
SMP234 (L)1Glu141.6%0.0
GNG121 (L)1GABA131.5%0.0
CB2572 (L)4ACh131.5%0.7
SMP350 (L)3ACh121.4%0.9
SMP087 (L)2Glu121.4%0.2
PRW008 (L)3ACh121.4%0.5
SMP186 (R)1ACh111.2%0.0
SMP743 (R)2ACh111.2%0.6
SMP087 (R)2Glu111.2%0.5
CB3252 (L)2Glu111.2%0.3
CB4134 (L)2Glu111.2%0.1
SMP186 (L)1ACh101.1%0.0
SMP734 (L)3ACh101.1%0.8
CB1011 (L)2Glu101.1%0.2
SMP368 (L)1ACh91.0%0.0
AN05B101 (R)1GABA91.0%0.0
SMP734 (R)3ACh91.0%0.7
FS3_d (L)5ACh91.0%0.4
CB1346 (R)1ACh80.9%0.0
SMP743 (L)1ACh80.9%0.0
AN05B101 (L)2GABA80.9%0.8
SMP483 (L)2ACh80.9%0.2
SMP190 (L)1ACh70.8%0.0
SMP504 (R)1ACh70.8%0.0
SMP504 (L)1ACh70.8%0.0
SMP083 (L)2Glu70.8%0.7
FS3_b (L)2ACh70.8%0.1
SMP535 (R)1Glu60.7%0.0
CB2535 (L)1ACh60.7%0.0
CB3614 (R)1ACh60.7%0.0
SMP218 (L)3Glu60.7%0.4
CB1548 (L)3ACh60.7%0.0
SMP082 (R)1Glu50.6%0.0
SMP228 (L)1Glu50.6%0.0
SMP346 (L)1Glu50.6%0.0
CB3614 (L)2ACh50.6%0.6
SMP344 (R)2Glu50.6%0.2
PRW041 (L)2ACh50.6%0.2
CB1026 (L)2unc50.6%0.2
SMP337 (L)1Glu40.5%0.0
CB0937 (L)1Glu40.5%0.0
SMP076 (L)1GABA40.5%0.0
SMP082 (L)1Glu40.5%0.0
SMP501 (L)1Glu40.5%0.0
CB1910 (L)1ACh40.5%0.0
GNG484 (L)1ACh40.5%0.0
AstA1 (R)1GABA40.5%0.0
AstA1 (L)1GABA40.5%0.0
SMP484 (L)2ACh40.5%0.5
CB1529 (L)2ACh40.5%0.5
PRW008 (R)3ACh40.5%0.4
CB2636 (L)2ACh40.5%0.0
SMP049 (L)1GABA30.3%0.0
SMP334 (L)1ACh30.3%0.0
CB1897 (R)1ACh30.3%0.0
CL165 (L)1ACh30.3%0.0
SMP222 (L)1Glu30.3%0.0
SMP379 (L)1ACh30.3%0.0
PRW002 (L)1Glu30.3%0.0
FS3_c (L)2ACh30.3%0.3
FS2 (L)2ACh30.3%0.3
FS2 (R)2ACh30.3%0.3
CB3768 (L)2ACh30.3%0.3
CB1897 (L)2ACh30.3%0.3
CB2814 (L)3Glu30.3%0.0
FS3_b (R)3ACh30.3%0.0
SMP086 (R)1Glu20.2%0.0
SMP356 (L)1ACh20.2%0.0
PS146 (R)1Glu20.2%0.0
FB6A_c (L)1Glu20.2%0.0
SMP076 (R)1GABA20.2%0.0
CB3446 (L)1ACh20.2%0.0
SMP374 (L)1Glu20.2%0.0
SMP542 (L)1Glu20.2%0.0
OA-VPM3 (L)1OA20.2%0.0
CB4157 (L)1Glu20.2%0.0
FS3_a (R)1ACh20.2%0.0
SIP075 (L)1ACh20.2%0.0
SMP430 (L)1ACh20.2%0.0
SMP355 (L)1ACh20.2%0.0
CB1011 (R)1Glu20.2%0.0
SMP738 (R)1unc20.2%0.0
SMP219 (L)1Glu20.2%0.0
PRW009 (R)1ACh20.2%0.0
SMP399_c (L)1ACh20.2%0.0
SMP086 (L)1Glu20.2%0.0
CB4125 (L)1unc20.2%0.0
SMP565 (R)1ACh20.2%0.0
CB1009 (R)1unc20.2%0.0
FB6G (L)1Glu20.2%0.0
PRW001 (L)1unc20.2%0.0
SMP235 (L)1Glu20.2%0.0
SMP384 (L)1unc20.2%0.0
SMP741 (R)1unc20.2%0.0
SMP181 (L)1unc20.2%0.0
AVLP708m (R)1ACh20.2%0.0
DNp48 (R)1ACh20.2%0.0
DNp48 (L)1ACh20.2%0.0
oviIN (L)1GABA20.2%0.0
SMP302 (L)2GABA20.2%0.0
LHAD3g1 (L)2Glu20.2%0.0
SMP061 (R)2Glu20.2%0.0
SMP182 (R)1ACh10.1%0.0
SMP107 (L)1Glu10.1%0.0
CB2636 (R)1ACh10.1%0.0
CB3261 (L)1ACh10.1%0.0
CB2876 (L)1ACh10.1%0.0
SIP029 (L)1ACh10.1%0.0
SMP178 (L)1ACh10.1%0.0
SMP190 (R)1ACh10.1%0.0
FB6D (L)1Glu10.1%0.0
FB6H (L)1unc10.1%0.0
FB7F (R)1Glu10.1%0.0
FB6A_b (L)1Glu10.1%0.0
SMP142 (L)1unc10.1%0.0
FB6C_b (L)1Glu10.1%0.0
SMP529 (L)1ACh10.1%0.0
CRE013 (L)1GABA10.1%0.0
SMP084 (R)1Glu10.1%0.0
SMP081 (R)1Glu10.1%0.0
CB1406 (L)1Glu10.1%0.0
FS3_a (L)1ACh10.1%0.0
CB4134 (R)1Glu10.1%0.0
FC1C_a (L)1ACh10.1%0.0
LHPV5b3 (L)1ACh10.1%0.0
SMP261 (L)1ACh10.1%0.0
CB2572 (R)1ACh10.1%0.0
CB3050 (L)1ACh10.1%0.0
CB2295 (R)1ACh10.1%0.0
SLP183 (L)1Glu10.1%0.0
SMP427 (L)1ACh10.1%0.0
CB3498 (L)1ACh10.1%0.0
CB3121 (L)1ACh10.1%0.0
FC2C (R)1ACh10.1%0.0
SMP352 (L)1ACh10.1%0.0
SMP216 (L)1Glu10.1%0.0
FC1C_a (R)1ACh10.1%0.0
CB0943 (L)1ACh10.1%0.0
FS1B_b (L)1ACh10.1%0.0
PRW037 (L)1ACh10.1%0.0
SMP379 (R)1ACh10.1%0.0
FB5G_b (L)1Glu10.1%0.0
SMP353 (L)1ACh10.1%0.0
CB3120 (L)1ACh10.1%0.0
SMP409 (L)1ACh10.1%0.0
FB5G_a (R)1Glu10.1%0.0
SMP403 (L)1ACh10.1%0.0
SMP182 (L)1ACh10.1%0.0
SMP408_d (L)1ACh10.1%0.0
SMP061 (L)1Glu10.1%0.0
CB2754 (L)1ACh10.1%0.0
SMP085 (L)1Glu10.1%0.0
CB1024 (R)1ACh10.1%0.0
SMP198 (L)1Glu10.1%0.0
SMP240 (L)1ACh10.1%0.0
PLP122_a (L)1ACh10.1%0.0
SMP034 (L)1Glu10.1%0.0
SMP741 (L)1unc10.1%0.0
SMP560 (L)1ACh10.1%0.0
SMP027 (L)1Glu10.1%0.0
SLP393 (R)1ACh10.1%0.0
SMP240 (R)1ACh10.1%0.0
SMP530_a (R)1Glu10.1%0.0
SLP259 (L)1Glu10.1%0.0
SMP531 (L)1Glu10.1%0.0
SMP189 (L)1ACh10.1%0.0
LNd_c (L)1ACh10.1%0.0
5-HTPMPD01 (R)15-HT10.1%0.0
SMP011_a (L)1Glu10.1%0.0
SLP244 (L)1ACh10.1%0.0
FB5H (L)1DA10.1%0.0
SMP183 (L)1ACh10.1%0.0
SMP384 (R)1unc10.1%0.0
WEDPN5 (L)1GABA10.1%0.0
LNd_b (R)1ACh10.1%0.0
SMP181 (R)1unc10.1%0.0
PAL01 (R)1unc10.1%0.0
5-HTPMPD01 (L)15-HT10.1%0.0
SMP146 (L)1GABA10.1%0.0
PPL101 (L)1DA10.1%0.0
LHCENT8 (L)1GABA10.1%0.0
SMP199 (L)1ACh10.1%0.0
DGI (L)1Glu10.1%0.0
LHPV5e3 (L)1ACh10.1%0.0
OA-VPM3 (R)1OA10.1%0.0
oviIN (R)1GABA10.1%0.0
SMP108 (R)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
CB1346
%
Out
CV
DNp48 (L)1ACh406.7%0.0
DNp48 (R)1ACh396.5%0.0
SMP188 (L)1ACh244.0%0.0
SMP034 (R)2Glu183.0%0.1
SMP269 (R)1ACh172.8%0.0
SMP337 (R)1Glu162.7%0.0
SMP337 (L)1Glu152.5%0.0
SMP403 (L)1ACh111.8%0.0
SMP034 (L)2Glu111.8%0.8
SMP566 (L)3ACh111.8%0.5
CB3614 (R)2ACh101.7%0.0
FB5G_a (R)2Glu91.5%0.3
SMP453 (L)3Glu91.5%0.5
SMP130 (L)1Glu81.3%0.0
SMP371_a (R)1Glu81.3%0.0
SMP371_b (R)1Glu81.3%0.0
SMP007 (L)1ACh71.2%0.0
SMP560 (L)1ACh71.2%0.0
SMP235 (L)1Glu71.2%0.0
SMP566 (R)3ACh71.2%0.5
SMP135 (L)1Glu61.0%0.0
SMP190 (R)1ACh61.0%0.0
SMP191 (L)1ACh61.0%0.0
SMP188 (R)1ACh61.0%0.0
SMP403 (R)3ACh61.0%0.7
CB1529 (L)3ACh61.0%0.4
SMP190 (L)1ACh50.8%0.0
SMP134 (R)1Glu50.8%0.0
SMP189 (R)1ACh50.8%0.0
oviIN (R)1GABA50.8%0.0
SMP338 (L)2Glu50.8%0.2
SMP490 (L)2ACh50.8%0.2
FB3C (R)2GABA50.8%0.2
SMP501 (R)2Glu50.8%0.2
SMP081 (L)1Glu40.7%0.0
SMP167 (L)1unc40.7%0.0
SMP450 (R)1Glu40.7%0.0
SMP131 (R)1Glu40.7%0.0
SMP134 (L)1Glu40.7%0.0
SMP271 (L)1GABA40.7%0.0
SMP011_a (L)1Glu40.7%0.0
SMP272 (L)1ACh40.7%0.0
SMP181 (L)1unc40.7%0.0
CB3614 (L)2ACh40.7%0.5
SMP306 (L)2GABA40.7%0.5
SMP449 (L)1Glu30.5%0.0
SMP355 (L)1ACh30.5%0.0
CB1815 (R)1Glu30.5%0.0
CB1529 (R)1ACh30.5%0.0
FB8G (R)1Glu30.5%0.0
SMP088 (R)1Glu30.5%0.0
SLP451 (L)1ACh30.5%0.0
SMP082 (L)1Glu30.5%0.0
SMP562 (R)1ACh30.5%0.0
SMP401 (L)1ACh30.5%0.0
CB1346 (R)1ACh30.5%0.0
SMP271 (R)1GABA30.5%0.0
oviIN (L)1GABA30.5%0.0
SMP453 (R)2Glu30.5%0.3
FB5G_a (L)2Glu30.5%0.3
SMP146 (R)1GABA20.3%0.0
SMP452 (R)1Glu20.3%0.0
SMP355 (R)1ACh20.3%0.0
SMP338 (R)1Glu20.3%0.0
PRW060 (R)1Glu20.3%0.0
DNd01 (L)1Glu20.3%0.0
SMP448 (L)1Glu20.3%0.0
FB8F_b (L)1Glu20.3%0.0
SMP452 (L)1Glu20.3%0.0
FB5G_b (R)1Glu20.3%0.0
FB7E (L)1Glu20.3%0.0
SMP320 (R)1ACh20.3%0.0
SMP131 (L)1Glu20.3%0.0
SMP130 (R)1Glu20.3%0.0
CB1871 (L)1Glu20.3%0.0
SMP562 (L)1ACh20.3%0.0
SMP405 (R)1ACh20.3%0.0
SMP132 (R)1Glu20.3%0.0
SMP400 (L)1ACh20.3%0.0
SMP483 (L)1ACh20.3%0.0
FB6U (R)1Glu20.3%0.0
SMP346 (L)1Glu20.3%0.0
SMP530_a (R)1Glu20.3%0.0
SMP505 (R)1ACh20.3%0.0
SMP504 (R)1ACh20.3%0.0
SMP234 (R)1Glu20.3%0.0
LHPV5l1 (R)1ACh20.3%0.0
SMP181 (R)1unc20.3%0.0
SMP179 (R)1ACh20.3%0.0
SMP146 (L)1GABA20.3%0.0
SMP272 (R)1ACh20.3%0.0
FB7E (R)2Glu20.3%0.0
SMP565 (L)2ACh20.3%0.0
SMP182 (R)1ACh10.2%0.0
SMP374 (L)1Glu10.2%0.0
SMP049 (R)1GABA10.2%0.0
SMP082 (R)1Glu10.2%0.0
SMP162 (L)1Glu10.2%0.0
SMP012 (R)1Glu10.2%0.0
MeVC27 (L)1unc10.2%0.0
CRE025 (L)1Glu10.2%0.0
SMP088 (L)1Glu10.2%0.0
SMP084 (R)1Glu10.2%0.0
SMP368 (R)1ACh10.2%0.0
OA-VPM3 (L)1OA10.2%0.0
SMP133 (L)1Glu10.2%0.0
SMP135 (R)1Glu10.2%0.0
FS3_a (R)1ACh10.2%0.0
SMP371_a (L)1Glu10.2%0.0
SMP519 (L)1ACh10.2%0.0
SMP261 (R)1ACh10.2%0.0
SMP319 (L)1ACh10.2%0.0
SMP232 (L)1Glu10.2%0.0
CB1011 (R)1Glu10.2%0.0
FB6U (L)1Glu10.2%0.0
SLP398 (L)1ACh10.2%0.0
SMP228 (L)1Glu10.2%0.0
SMP220 (L)1Glu10.2%0.0
SMP125 (L)1Glu10.2%0.0
CB4091 (R)1Glu10.2%0.0
FB7I (L)1Glu10.2%0.0
FB5G_b (L)1Glu10.2%0.0
SMP166 (L)1GABA10.2%0.0
SLP103 (R)1Glu10.2%0.0
SIP076 (L)1ACh10.2%0.0
CB0943 (L)1ACh10.2%0.0
CB2814 (L)1Glu10.2%0.0
SMP408_d (L)1ACh10.2%0.0
FB8I (L)1Glu10.2%0.0
SMP076 (L)1GABA10.2%0.0
CB1897 (R)1ACh10.2%0.0
SMP409 (R)1ACh10.2%0.0
FB3E (L)1GABA10.2%0.0
CB1895 (L)1ACh10.2%0.0
SMP491 (R)1ACh10.2%0.0
SMP399_c (L)1ACh10.2%0.0
SMP217 (R)1Glu10.2%0.0
CRE025 (R)1Glu10.2%0.0
SMP535 (L)1Glu10.2%0.0
SMP191 (R)1ACh10.2%0.0
CB2535 (L)1ACh10.2%0.0
SMP117_a (R)1Glu10.2%0.0
SMP560 (R)1ACh10.2%0.0
SMP371_b (L)1Glu10.2%0.0
SMP501 (L)1Glu10.2%0.0
CB1897 (L)1ACh10.2%0.0
FB3E (R)1GABA10.2%0.0
SMP336 (L)1Glu10.2%0.0
CB2539 (R)1GABA10.2%0.0
FB5Y_b (L)1Glu10.2%0.0
SMP508 (L)1ACh10.2%0.0
SMP346 (R)1Glu10.2%0.0
CB4125 (R)1unc10.2%0.0
CB1910 (L)1ACh10.2%0.0
SMP240 (R)1ACh10.2%0.0
SMP299 (R)1GABA10.2%0.0
DNpe053 (R)1ACh10.2%0.0
SMP336 (R)1Glu10.2%0.0
SMP269 (L)1ACh10.2%0.0
SMP119 (L)1Glu10.2%0.0
SMP404 (R)1ACh10.2%0.0
SMP513 (R)1ACh10.2%0.0
SMP189 (L)1ACh10.2%0.0
LNd_c (L)1ACh10.2%0.0
SLP397 (L)1ACh10.2%0.0
SLP244 (R)1ACh10.2%0.0
FB2G_b (R)1Glu10.2%0.0
SMP238 (L)1ACh10.2%0.0
SIP026 (L)1Glu10.2%0.0
SMP234 (L)1Glu10.2%0.0
SMP235 (R)1Glu10.2%0.0
SMP402 (R)1ACh10.2%0.0
SMP012 (L)1Glu10.2%0.0
SMP011_a (R)1Glu10.2%0.0
FB6D (R)1Glu10.2%0.0
DGI (R)1Glu10.2%0.0
PRW060 (L)1Glu10.2%0.0
AN05B101 (R)1GABA10.2%0.0
SMP199 (L)1ACh10.2%0.0
DGI (L)1Glu10.2%0.0
SIP029 (R)1ACh10.2%0.0