Male CNS – Cell Type Explorer

CB1124(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
476
Total Synapses
Post: 327 | Pre: 149
log ratio : -1.13
476
Mean Synapses
Post: 327 | Pre: 149
log ratio : -1.13
GABA(79.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (11 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SIP(R)21365.1%-1.935637.6%
CRE(R)5516.8%-1.691711.4%
SIP(L)195.8%1.244530.2%
CRE(L)103.1%0.26128.1%
SMP(R)134.0%-1.1264.0%
SLP(R)51.5%0.0053.4%
CentralBrain-unspecified82.4%-3.0010.7%
SLP(L)20.6%1.3253.4%
b'L(L)10.3%0.0010.7%
aL(R)00.0%inf10.7%
b'L(R)10.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB1124
%
In
CV
M_vPNml50 (R)2GABA216.9%0.0
LHPD2a1 (R)5ACh185.9%0.9
MBON03 (L)1Glu165.3%0.0
M_lvPNm26 (R)2ACh144.6%0.3
LHCENT2 (R)1GABA134.3%0.0
LHCENT9 (R)1GABA103.3%0.0
LHPD4c1 (R)1ACh93.0%0.0
SMP177 (R)1ACh82.6%0.0
SMP108 (R)1ACh82.6%0.0
SMP108 (L)1ACh82.6%0.0
SIP015 (R)4Glu82.6%0.9
LHPV5a2 (R)2ACh72.3%0.4
SIP087 (L)1unc62.0%0.0
SIP027 (R)3GABA62.0%0.0
LHAV6g1 (L)1Glu51.7%0.0
LHPV5e1 (R)1ACh51.7%0.0
LHPV5e1 (L)1ACh41.3%0.0
MBON13 (R)1ACh41.3%0.0
CRE050 (L)1Glu41.3%0.0
SIP090 (R)1ACh41.3%0.0
CRE076 (R)1ACh41.3%0.0
LHPV12a1 (L)1GABA41.3%0.0
CB4196 (R)2Glu41.3%0.5
LHCENT3 (R)1GABA31.0%0.0
CB1357 (R)1ACh31.0%0.0
CB4198 (R)1Glu31.0%0.0
LHPD2a4_a (R)1ACh31.0%0.0
LHAV6g1 (R)1Glu31.0%0.0
WEDPN4 (R)1GABA31.0%0.0
M_spPN5t10 (L)1ACh31.0%0.0
SMP568_a (L)1ACh31.0%0.0
LHPD2a6 (R)1Glu20.7%0.0
MBON03 (R)1Glu20.7%0.0
MBON12 (R)1ACh20.7%0.0
MBON17-like (R)1ACh20.7%0.0
CB2151 (R)1GABA20.7%0.0
CRE003_b (R)1ACh20.7%0.0
SMP059 (R)1Glu20.7%0.0
LHPV5a1 (R)1ACh20.7%0.0
SIP003_a (R)1ACh20.7%0.0
MBON28 (L)1ACh20.7%0.0
CB4150 (R)1ACh20.7%0.0
M_lvPNm24 (R)1ACh20.7%0.0
PPL107 (R)1DA20.7%0.0
CRE076 (L)1ACh20.7%0.0
LHCENT6 (R)1GABA20.7%0.0
mALB1 (L)1GABA20.7%0.0
CB4197 (R)2Glu20.7%0.0
SMP326 (L)2ACh20.7%0.0
SIP027 (L)2GABA20.7%0.0
CRE052 (R)2GABA20.7%0.0
SMP058 (L)1Glu10.3%0.0
SIP029 (L)1ACh10.3%0.0
LHPV10d1 (R)1ACh10.3%0.0
ATL013 (R)1ACh10.3%0.0
MBON04 (R)1Glu10.3%0.0
CRE082 (R)1ACh10.3%0.0
MBON10 (L)1GABA10.3%0.0
PPL107 (L)1DA10.3%0.0
MBON05 (L)1Glu10.3%0.0
MBON17-like (L)1ACh10.3%0.0
SMP075 (L)1Glu10.3%0.0
CB1079 (R)1GABA10.3%0.0
MBON15-like (R)1ACh10.3%0.0
CB3476 (R)1ACh10.3%0.0
CB1124 (L)1GABA10.3%0.0
SIP003_b (L)1ACh10.3%0.0
LHAV9a1_a (R)1ACh10.3%0.0
SIP003_b (R)1ACh10.3%0.0
LAL031 (R)1ACh10.3%0.0
CB2117 (L)1ACh10.3%0.0
CRE055 (R)1GABA10.3%0.0
M_lvPNm25 (L)1ACh10.3%0.0
LHAD1c2 (R)1ACh10.3%0.0
LHAV9a1_a (L)1ACh10.3%0.0
CL005 (R)1ACh10.3%0.0
SIP011 (R)1Glu10.3%0.0
CRE018 (L)1ACh10.3%0.0
SMP443 (R)1Glu10.3%0.0
M_lvPNm29 (R)1ACh10.3%0.0
SMP145 (L)1unc10.3%0.0
MBON15-like (L)1ACh10.3%0.0
CRE009 (L)1ACh10.3%0.0
MBON28 (R)1ACh10.3%0.0
SMP143 (L)1unc10.3%0.0
SMP143 (R)1unc10.3%0.0
SIP087 (R)1unc10.3%0.0
M_lvPNm26 (L)1ACh10.3%0.0
LHPD2d1 (R)1Glu10.3%0.0
CRE009 (R)1ACh10.3%0.0
CRE048 (R)1Glu10.3%0.0
LHPD5d1 (R)1ACh10.3%0.0
FB3C (R)1GABA10.3%0.0
LHPV10d1 (L)1ACh10.3%0.0
SMP457 (R)1ACh10.3%0.0
LHCENT10 (R)1GABA10.3%0.0
SMP586 (R)1ACh10.3%0.0
LHCENT8 (R)1GABA10.3%0.0
CRE021 (R)1GABA10.3%0.0
OA-VUMa6 (M)1OA10.3%0.0

Outputs

downstream
partner
#NTconns
CB1124
%
Out
CV
SIP003_b (R)4ACh4711.8%0.3
SIP003_b (L)4ACh297.3%0.7
SIP003_a (L)4ACh287.1%0.3
SIP003_a (R)4ACh194.8%0.4
LHPV5e1 (L)1ACh133.3%0.0
LHPV5e1 (R)1ACh123.0%0.0
SIP013 (L)2Glu102.5%0.4
CB4196 (L)2Glu92.3%0.1
APL (R)1GABA82.0%0.0
LAL034 (R)3ACh82.0%0.6
SIP013 (R)2Glu82.0%0.2
CB4196 (R)2Glu71.8%0.1
CB2262 (R)3Glu71.8%0.5
CRE018 (R)4ACh71.8%0.5
SMP198 (R)1Glu61.5%0.0
CB2550 (R)2ACh61.5%0.7
CB2117 (R)3ACh61.5%0.7
LHAV6c1 (R)2Glu51.3%0.6
M_lvPNm26 (L)2ACh51.3%0.6
CRE095 (R)2ACh51.3%0.2
CB2550 (L)1ACh41.0%0.0
SIP046 (L)1Glu41.0%0.0
FB1G (L)1ACh41.0%0.0
CRE103 (L)2ACh41.0%0.5
SIP027 (R)3GABA41.0%0.4
PPL105 (L)1DA30.8%0.0
SIP015 (L)1Glu30.8%0.0
SIP011 (L)1Glu30.8%0.0
CB2117 (L)1ACh30.8%0.0
CB2262 (L)1Glu30.8%0.0
SMP198 (L)1Glu30.8%0.0
MBON24 (R)1ACh30.8%0.0
CB4198 (R)2Glu30.8%0.3
FB5B (R)2Glu30.8%0.3
CB2230 (L)2Glu30.8%0.3
M_lvPNm26 (R)2ACh30.8%0.3
SIP011 (R)3Glu30.8%0.0
CB4159 (R)1Glu20.5%0.0
LAL034 (L)1ACh20.5%0.0
MBON04 (R)1Glu20.5%0.0
CRE018 (L)1ACh20.5%0.0
LHCENT2 (L)1GABA20.5%0.0
CB2088 (L)1ACh20.5%0.0
LHAV6c1 (L)1Glu20.5%0.0
CRE051 (R)1GABA20.5%0.0
LHAV9a1_b (L)1ACh20.5%0.0
CB2846 (L)1ACh20.5%0.0
LHAV9a1_a (L)1ACh20.5%0.0
FB2F_d (L)1Glu20.5%0.0
LHPV10d1 (L)1ACh20.5%0.0
LHPD4c1 (L)1ACh20.5%0.0
LHCENT2 (R)1GABA20.5%0.0
APL (L)1GABA20.5%0.0
CB4197 (R)2Glu20.5%0.0
LHAV9a1_b (R)2ACh20.5%0.0
CRE003_b (R)2ACh20.5%0.0
PAM06 (R)2DA20.5%0.0
SIP030 (R)2ACh20.5%0.0
SMP112 (R)2ACh20.5%0.0
CRE103 (R)2ACh20.5%0.0
SLP461 (L)1ACh10.3%0.0
SMP204 (R)1Glu10.3%0.0
CB1956 (L)1ACh10.3%0.0
FB5B (L)1Glu10.3%0.0
CL182 (R)1Glu10.3%0.0
CRE055 (R)1GABA10.3%0.0
CB4159 (L)1Glu10.3%0.0
PPL107 (L)1DA10.3%0.0
SMP203 (L)1ACh10.3%0.0
CB2846 (R)1ACh10.3%0.0
SIP074_b (R)1ACh10.3%0.0
LAL032 (R)1ACh10.3%0.0
PAM12 (R)1DA10.3%0.0
PAM06 (L)1DA10.3%0.0
LHAV9a1_a (R)1ACh10.3%0.0
PAM14 (R)1DA10.3%0.0
SIP049 (L)1ACh10.3%0.0
CRE093 (R)1ACh10.3%0.0
CB1357 (R)1ACh10.3%0.0
CRE092 (L)1ACh10.3%0.0
SIP027 (L)1GABA10.3%0.0
CB1361 (R)1Glu10.3%0.0
SLP242 (L)1ACh10.3%0.0
CRE095 (L)1ACh10.3%0.0
LHPD2a4_a (L)1ACh10.3%0.0
SIP015 (R)1Glu10.3%0.0
SMP128 (R)1Glu10.3%0.0
CB2310 (R)1ACh10.3%0.0
LHPD2a4_b (L)1ACh10.3%0.0
SIP051 (R)1ACh10.3%0.0
LHPD2a4_b (R)1ACh10.3%0.0
FB1E_a (R)1Glu10.3%0.0
SMP568_a (R)1ACh10.3%0.0
P1_8b (R)1ACh10.3%0.0
PAM10 (R)1DA10.3%0.0
SIP037 (R)1Glu10.3%0.0
SMP561 (R)1ACh10.3%0.0
ALIN3 (L)1ACh10.3%0.0
SIP087 (R)1unc10.3%0.0
SIP090 (R)1ACh10.3%0.0
SLP073 (R)1ACh10.3%0.0
LHAV6g1 (R)1Glu10.3%0.0
LHPV4m1 (L)1ACh10.3%0.0
LHCENT1 (R)1GABA10.3%0.0
CRE076 (R)1ACh10.3%0.0
LHCENT10 (L)1GABA10.3%0.0
M_spPN5t10 (L)1ACh10.3%0.0
LHCENT4 (L)1Glu10.3%0.0
LHPV5e3 (L)1ACh10.3%0.0
SMP108 (L)1ACh10.3%0.0