Male CNS – Cell Type Explorer

CB0946(R)

1
Total Neurons
Right: 1 | Left: 0
log ratio : -inf
407
Total Synapses
Post: 259 | Pre: 148
log ratio : -0.81
407
Mean Synapses
Post: 259 | Pre: 148
log ratio : -0.81
ACh(85.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SLP(R)13150.6%-1.365134.5%
SMP(R)8332.0%0.108960.1%
CentralBrain-unspecified2710.4%-2.1764.1%
PLP(R)114.2%-inf00.0%
SCL(R)72.7%-1.8121.4%

Connectivity

Inputs

upstream
partner
#NTconns
CB0946
%
In
CV
VP1l+_lvPN (R)5ACh2511.5%0.4
M_lvPNm35 (R)2ACh219.6%0.4
SMP532_b (R)1Glu156.9%0.0
AN05B101 (R)2GABA136.0%0.8
CB2600 (R)3Glu125.5%0.2
SLP064 (R)1Glu104.6%0.0
AN05B101 (L)1GABA83.7%0.0
CB4128 (R)3unc83.7%0.6
SMP532_a (R)1Glu73.2%0.0
aDT4 (L)25-HT73.2%0.4
AN27X009 (R)1ACh62.8%0.0
aMe13 (R)1ACh62.8%0.0
CB4127 (R)4unc62.8%0.6
AN27X009 (L)1ACh52.3%0.0
DN1a (R)1Glu52.3%0.0
CB4156 (R)1unc41.8%0.0
aMe13 (L)1ACh41.8%0.0
DN1pB (R)1Glu41.8%0.0
WED092 (R)1ACh41.8%0.0
SLP322 (R)1ACh31.4%0.0
PRW009 (L)1ACh31.4%0.0
AVLP594 (L)1unc31.4%0.0
CB1059 (R)2Glu31.4%0.3
WED092 (L)1ACh20.9%0.0
CB3308 (R)1ACh20.9%0.0
SLP068 (R)1Glu20.9%0.0
PPL203 (R)1unc20.9%0.0
SLP060 (R)1GABA20.9%0.0
aDT4 (R)25-HT20.9%0.0
SMP276 (R)1Glu10.5%0.0
SLP406 (R)1ACh10.5%0.0
CB2530 (R)1Glu10.5%0.0
SMP243 (R)1ACh10.5%0.0
CB3566 (R)1Glu10.5%0.0
LHPV4c4 (R)1Glu10.5%0.0
CB3556 (R)1ACh10.5%0.0
CB2648 (R)1Glu10.5%0.0
LHPV6f5 (R)1ACh10.5%0.0
LHPV6h1 (R)1ACh10.5%0.0
CB1057 (R)1Glu10.5%0.0
SMP168 (R)1ACh10.5%0.0
SLP281 (L)1Glu10.5%0.0
SLP460 (R)1Glu10.5%0.0
M_vPNml55 (R)1GABA10.5%0.0
CB2298 (R)1Glu10.5%0.0
SLP355 (R)1ACh10.5%0.0
VP1m+VP2_lvPN1 (R)1ACh10.5%0.0
AVLP097 (R)1ACh10.5%0.0
SLP457 (R)1unc10.5%0.0
PRW066 (R)1ACh10.5%0.0
AVLP030 (R)1GABA10.5%0.0
5thsLNv_LNd6 (R)1ACh10.5%0.0
AVLP594 (R)1unc10.5%0.0

Outputs

downstream
partner
#NTconns
CB0946
%
Out
CV
CB4127 (R)5unc3914.7%0.4
SMP286 (R)1GABA3714.0%0.0
CB4124 (R)4GABA2910.9%0.8
AstA1 (R)1GABA238.7%0.0
AstA1 (L)1GABA155.7%0.0
SLP355 (R)1ACh145.3%0.0
CB1949 (R)1unc114.2%0.0
SMP532_b (R)1Glu103.8%0.0
CB4125 (R)2unc93.4%0.3
LHPV6m1 (R)1Glu72.6%0.0
CB1081 (R)2GABA72.6%0.7
SMP527 (R)1ACh62.3%0.0
SLP060 (R)1GABA62.3%0.0
SLP324 (R)1ACh51.9%0.0
SMP532_a (R)1Glu51.9%0.0
SLP266 (R)2Glu51.9%0.6
SLP368 (R)1ACh31.1%0.0
DNpe035 (R)1ACh31.1%0.0
PRW073 (R)1Glu20.8%0.0
SLP429 (R)1ACh20.8%0.0
CB0975 (R)1ACh20.8%0.0
CB4128 (R)1unc20.8%0.0
SMP444 (R)1Glu20.8%0.0
SMP083 (L)1Glu20.8%0.0
SMP285 (R)1GABA20.8%0.0
SMP083 (R)1Glu10.4%0.0
FB6F (R)1Glu10.4%0.0
CB4151 (R)1Glu10.4%0.0
SLP064 (R)1Glu10.4%0.0
SMP304 (R)1GABA10.4%0.0
SMP362 (R)1ACh10.4%0.0
SMP512 (R)1ACh10.4%0.0
CB2539 (R)1GABA10.4%0.0
SMP513 (R)1ACh10.4%0.0
SMP271 (R)1GABA10.4%0.0
SLP068 (R)1Glu10.4%0.0
LPN_a (R)1ACh10.4%0.0
SMP202 (R)1ACh10.4%0.0
CRZ01 (R)1unc10.4%0.0
LHPV5i1 (R)1ACh10.4%0.0
SMP169 (R)1ACh10.4%0.0
SLP244 (R)1ACh10.4%0.0