Male CNS – Cell Type Explorer

BiT(R)

AKA: aDT-h (Cachero 2010) , aDT6 (Yu 2010) ,

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,255
Total Synapses
Post: 1,614 | Pre: 641
log ratio : -1.33
2,255
Mean Synapses
Post: 1,614 | Pre: 641
log ratio : -1.33
ACh(85.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
PRW53433.1%-7.4830.5%
SMP(R)22113.7%0.2626541.3%
SMP(L)1448.9%0.1916425.6%
CentralBrain-unspecified25816.0%-2.52457.0%
FLA(R)26716.5%-inf00.0%
SLP(R)925.7%0.089715.1%
SLP(L)915.6%-0.446710.5%
AL(R)70.4%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
BiT
%
In
CV
SLP414 (L)6Glu685.2%0.7
SMP306 (R)2GABA675.1%0.2
CB0975 (L)4ACh574.4%0.4
SLP414 (R)4Glu564.3%1.0
CB1379 (L)3ACh554.2%0.1
CB4133 (R)3Glu524.0%0.7
CB4128 (R)4unc503.8%0.2
PRW052 (R)1Glu423.2%0.0
CB4023 (R)5ACh382.9%0.7
PRW004 (M)1Glu362.8%0.0
PRW037 (R)2ACh352.7%0.9
CB4125 (R)2unc342.6%0.9
PRW060 (R)1Glu332.5%0.0
CB4133 (L)4Glu332.5%1.1
SMP740 (L)4Glu332.5%0.4
PRW051 (L)1Glu292.2%0.0
CB4023 (L)4ACh272.1%0.9
PRW075 (R)2ACh262.0%0.3
SMP726m (L)2ACh262.0%0.2
SMP306 (L)2GABA251.9%0.0
SLP441 (L)1ACh221.7%0.0
PRW041 (R)2ACh181.4%0.6
PRW002 (R)1Glu171.3%0.0
SLP441 (R)1ACh171.3%0.0
PRW075 (L)2ACh161.2%0.6
SLP259 (R)2Glu161.2%0.0
CB0943 (L)2ACh151.1%0.5
SMP740 (R)3Glu151.1%0.4
CB4127 (R)5unc151.1%0.5
DNpe041 (R)1GABA141.1%0.0
CB2517 (R)2Glu141.1%0.4
CB0943 (R)2ACh110.8%0.1
ANXXX338 (R)2Glu110.8%0.1
SMP497 (R)2Glu100.8%0.6
SMP302 (R)2GABA100.8%0.4
ANXXX169 (R)3Glu100.8%0.4
CB4022 (L)2ACh80.6%0.8
GNG628 (R)1unc70.5%0.0
PRW051 (R)1Glu70.5%0.0
GNG630 (L)1unc70.5%0.0
DNp48 (L)1ACh70.5%0.0
SMP302 (L)1GABA60.5%0.0
GNG550 (R)15-HT60.5%0.0
SMP497 (L)2Glu60.5%0.7
GNG406 (R)2ACh60.5%0.7
CB4157 (L)3Glu60.5%0.4
CB1024 (R)1ACh50.4%0.0
SLP347 (R)2Glu50.4%0.6
DNd01 (L)2Glu50.4%0.2
SMP483 (L)2ACh50.4%0.2
SLP268 (L)3Glu50.4%0.3
SLP440 (R)1ACh40.3%0.0
CB4125 (L)1unc40.3%0.0
CB1610 (R)1Glu40.3%0.0
SMP286 (R)1GABA40.3%0.0
PRW060 (L)1Glu40.3%0.0
CB4157 (R)2Glu40.3%0.5
SMP095 (L)2Glu40.3%0.5
GNG572 (R)2unc40.3%0.0
SMP305 (R)1unc30.2%0.0
CB3084 (R)1Glu30.2%0.0
FLA004m (L)1ACh30.2%0.0
FLA004m (R)1ACh30.2%0.0
CB1406 (R)1Glu30.2%0.0
SMP716m (L)1ACh30.2%0.0
FLA018 (R)1unc30.2%0.0
SLP259 (L)1Glu30.2%0.0
PRW061 (L)1GABA30.2%0.0
BiT (L)1ACh30.2%0.0
5-HTPMPD01 (L)15-HT30.2%0.0
DNp48 (R)1ACh30.2%0.0
AN05B101 (R)1GABA30.2%0.0
SLP268 (R)2Glu30.2%0.3
PRW016 (R)2ACh30.2%0.3
PRW073 (L)1Glu20.2%0.0
SLP440 (L)1ACh20.2%0.0
CB1617 (R)1Glu20.2%0.0
SLP217 (R)1Glu20.2%0.0
SMP299 (R)1GABA20.2%0.0
CB1949 (R)1unc20.2%0.0
SLP347 (L)1Glu20.2%0.0
SMP261 (L)1ACh20.2%0.0
SMP535 (L)1Glu20.2%0.0
ANXXX136 (R)1ACh20.2%0.0
PRW074 (R)1Glu20.2%0.0
PRW002 (L)1Glu20.2%0.0
DNpe035 (L)1ACh20.2%0.0
SMP285 (R)1GABA20.2%0.0
FB7G (R)2Glu20.2%0.0
SMP297 (R)2GABA20.2%0.0
PRW017 (R)1ACh10.1%0.0
FB7A (L)1Glu10.1%0.0
SLP273 (R)1ACh10.1%0.0
AN27X018 (L)1Glu10.1%0.0
SMP187 (L)1ACh10.1%0.0
SIP078 (L)1ACh10.1%0.0
LHPV5e2 (L)1ACh10.1%0.0
SMP539 (R)1Glu10.1%0.0
GNG289 (R)1ACh10.1%0.0
CB4122 (L)1Glu10.1%0.0
SMP483 (R)1ACh10.1%0.0
CB2517 (L)1Glu10.1%0.0
SMP352 (R)1ACh10.1%0.0
FS4A (R)1ACh10.1%0.0
FS4A (L)1ACh10.1%0.0
CB2814 (R)1Glu10.1%0.0
CB3043 (L)1ACh10.1%0.0
CB2479 (R)1ACh10.1%0.0
SMP738 (R)1unc10.1%0.0
SMP107 (R)1Glu10.1%0.0
CB1008 (R)1ACh10.1%0.0
CB3050 (R)1ACh10.1%0.0
CB3541 (L)1ACh10.1%0.0
SMP737 (R)1unc10.1%0.0
FB7B (L)1unc10.1%0.0
PRW033 (R)1ACh10.1%0.0
SMP087 (L)1Glu10.1%0.0
ANXXX169 (L)1Glu10.1%0.0
PRW034 (R)1ACh10.1%0.0
CB2636 (R)1ACh10.1%0.0
CB4022 (R)1ACh10.1%0.0
PRW021 (R)1unc10.1%0.0
DNg03 (R)1ACh10.1%0.0
PRW022 (R)1GABA10.1%0.0
SMP026 (L)1ACh10.1%0.0
GNG446 (R)1ACh10.1%0.0
ANXXX150 (L)1ACh10.1%0.0
CB1081 (L)1GABA10.1%0.0
SLP372 (R)1ACh10.1%0.0
PRW053 (R)1ACh10.1%0.0
SMP741 (R)1unc10.1%0.0
SMP505 (R)1ACh10.1%0.0
PRW001 (R)1unc10.1%0.0
DN1pB (L)1Glu10.1%0.0
DN1pB (R)1Glu10.1%0.0
CB4128 (L)1unc10.1%0.0
SLP068 (L)1Glu10.1%0.0
PAL01 (R)1unc10.1%0.0
PRW062 (R)1ACh10.1%0.0
SMP743 (L)1ACh10.1%0.0
DNge150 (M)1unc10.1%0.0
FLA020 (L)1Glu10.1%0.0
GNG323 (M)1Glu10.1%0.0

Outputs

downstream
partner
#NTconns
BiT
%
Out
CV
SLP347 (R)2Glu524.0%0.3
SLP268 (L)6Glu503.9%0.7
FB7L (L)2Glu493.8%0.1
SMP305 (R)2unc433.3%0.4
CB1406 (R)3Glu403.1%0.1
SLP268 (R)4Glu372.9%0.5
SMP297 (R)4GABA362.8%0.4
SLP347 (L)2Glu342.6%0.1
FB7L (R)2Glu332.6%0.2
CB1897 (L)4ACh302.3%0.2
SLP211 (R)1ACh282.2%0.0
CB4023 (R)4ACh272.1%0.7
SMP297 (L)4GABA272.1%0.3
SMP305 (L)2unc262.0%0.3
FB8E (R)2Glu262.0%0.0
FB8E (L)3Glu262.0%0.3
SMP505 (R)1ACh201.5%0.0
CB1897 (R)4ACh201.5%1.2
SMP497 (R)2Glu191.5%0.1
SMP535 (R)2Glu181.4%0.9
SLP259 (R)2Glu181.4%0.3
SLP397 (L)1ACh171.3%0.0
CB1406 (L)2Glu171.3%0.6
CB4022 (L)2ACh161.2%0.2
FB8I (L)2Glu161.2%0.2
FB8H (R)2Glu151.2%0.5
SLP414 (R)4Glu151.2%0.3
FB8G (L)3Glu141.1%0.5
PRW004 (M)1Glu131.0%0.0
SLP394 (R)1ACh131.0%0.0
CB2814 (R)2Glu131.0%0.2
FB8G (R)2Glu131.0%0.1
FB7G (R)2Glu131.0%0.1
FB8H (L)2Glu120.9%0.5
CB2814 (L)3Glu110.9%0.5
CB4122 (R)2Glu100.8%0.8
CB4126 (R)2GABA100.8%0.8
FB7A (R)3Glu100.8%0.8
FB8I (R)2Glu100.8%0.0
SMP304 (L)1GABA90.7%0.0
CB4133 (L)4Glu90.7%1.0
SLP372 (L)2ACh90.7%0.3
SLP397 (R)1ACh80.6%0.0
SMP338 (L)1Glu80.6%0.0
LoVP64 (R)1Glu80.6%0.0
SMP483 (R)2ACh80.6%0.5
SMP338 (R)2Glu80.6%0.0
SLP414 (L)3Glu80.6%0.5
SMP483 (L)1ACh70.5%0.0
SMP269 (R)1ACh70.5%0.0
CB4023 (L)2ACh70.5%0.7
FB7A (L)1Glu60.5%0.0
CB3084 (R)1Glu60.5%0.0
SLP259 (L)1Glu60.5%0.0
SLP396 (R)1ACh60.5%0.0
SMP560 (R)1ACh60.5%0.0
FB7B (R)1unc60.5%0.0
SLP149 (L)1ACh60.5%0.0
SMP505 (L)1ACh60.5%0.0
BiT (L)1ACh60.5%0.0
FB6H (R)1unc60.5%0.0
SMP304 (R)2GABA60.5%0.7
SLP115 (L)2ACh60.5%0.3
FB8F_b (L)3Glu60.5%0.4
FB7G (L)2Glu60.5%0.0
SMP187 (L)1ACh50.4%0.0
SLP440 (R)1ACh50.4%0.0
SLP024 (L)1Glu50.4%0.0
FB7B (L)1unc50.4%0.0
SLP211 (L)1ACh50.4%0.0
SLP068 (R)1Glu50.4%0.0
FS4A (L)2ACh50.4%0.6
SMP299 (R)2GABA50.4%0.2
SMP095 (R)1Glu40.3%0.0
SMP560 (L)1ACh40.3%0.0
SMP702m (L)2Glu40.3%0.5
CB1610 (R)2Glu40.3%0.5
CB4133 (R)3Glu40.3%0.4
CB4022 (R)2ACh40.3%0.0
SLP273 (R)1ACh30.2%0.0
CB2479 (R)1ACh30.2%0.0
FB6H (L)1unc30.2%0.0
SMP598 (L)1Glu30.2%0.0
CB3043 (L)1ACh30.2%0.0
FB5G_b (R)1Glu30.2%0.0
SMP702m (R)1Glu30.2%0.0
SLP273 (L)1ACh30.2%0.0
SMP187 (R)1ACh30.2%0.0
PRW032 (R)1ACh30.2%0.0
SLP394 (L)1ACh30.2%0.0
CB1858 (R)1unc30.2%0.0
CB1610 (L)2Glu30.2%0.3
SLP372 (R)2ACh30.2%0.3
SLP102 (R)1Glu20.2%0.0
IPC (R)1unc20.2%0.0
CB4139 (L)1ACh20.2%0.0
SMP484 (R)1ACh20.2%0.0
CB4122 (L)1Glu20.2%0.0
SMP337 (L)1Glu20.2%0.0
CB2572 (R)1ACh20.2%0.0
FB8F_b (R)1Glu20.2%0.0
SMP125 (L)1Glu20.2%0.0
CB4126 (L)1GABA20.2%0.0
SMP220 (R)1Glu20.2%0.0
CB0024 (R)1Glu20.2%0.0
SMP538 (R)1Glu20.2%0.0
CB2572 (L)1ACh20.2%0.0
CB2479 (L)1ACh20.2%0.0
SLP149 (R)1ACh20.2%0.0
CB1081 (L)1GABA20.2%0.0
SMP096 (R)1Glu20.2%0.0
SLP115 (R)1ACh20.2%0.0
SLP376 (R)1Glu20.2%0.0
SMP582 (R)1ACh20.2%0.0
PRW001 (R)1unc20.2%0.0
SMP183 (R)1ACh20.2%0.0
CB3614 (R)1ACh20.2%0.0
SMP034 (L)1Glu20.2%0.0
SMP202 (L)1ACh20.2%0.0
PRW058 (R)1GABA20.2%0.0
SLP244 (R)1ACh20.2%0.0
DGI (R)1Glu20.2%0.0
FLA020 (R)1Glu20.2%0.0
CB3541 (L)2ACh20.2%0.0
CB1008 (R)2ACh20.2%0.0
CB4128 (R)2unc20.2%0.0
DN1pB (L)2Glu20.2%0.0
FS4C (L)1ACh10.1%0.0
GNG289 (R)1ACh10.1%0.0
ANXXX338 (R)1Glu10.1%0.0
SLP387 (R)1Glu10.1%0.0
SLP439 (R)1ACh10.1%0.0
SLP396 (L)1ACh10.1%0.0
PRW073 (R)1Glu10.1%0.0
SMP598 (R)1Glu10.1%0.0
FS4A (R)1ACh10.1%0.0
SMP167 (R)1unc10.1%0.0
SMP497 (L)1Glu10.1%0.0
CB4110 (R)1ACh10.1%0.0
CB3498 (R)1ACh10.1%0.0
SAF (R)1Glu10.1%0.0
CB3357 (R)1ACh10.1%0.0
SLP441 (L)1ACh10.1%0.0
SMP025 (R)1Glu10.1%0.0
SIP077 (L)1ACh10.1%0.0
CB1858 (L)1unc10.1%0.0
CB1081 (R)1GABA10.1%0.0
FLA004m (L)1ACh10.1%0.0
SMP535 (L)1Glu10.1%0.0
CB2539 (L)1GABA10.1%0.0
SMP086 (L)1Glu10.1%0.0
SMP529 (R)1ACh10.1%0.0
CB1352 (R)1Glu10.1%0.0
SMP565 (R)1ACh10.1%0.0
CB1537 (R)1ACh10.1%0.0
SIP077 (R)1ACh10.1%0.0
SMP743 (R)1ACh10.1%0.0
SMP269 (L)1ACh10.1%0.0
SMP741 (R)1unc10.1%0.0
PRW001 (L)1unc10.1%0.0
PRW074 (L)1Glu10.1%0.0
DN1pB (R)1Glu10.1%0.0
CSD (L)15-HT10.1%0.0
IPC (L)1unc10.1%0.0
CB2636 (R)1ACh10.1%0.0
SMP744 (R)1ACh10.1%0.0
GNG090 (R)1GABA10.1%0.0
LoVP64 (L)1Glu10.1%0.0