Male CNS – Cell Type Explorer

Am1

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
153,062
Total Synapses
Right: 79,238 | Left: 73,824
log ratio : -0.10
76,531
Mean Synapses
Right: 79,238 | Left: 73,824
log ratio : -0.10
GABA(88.3% CL)
Neurotransmitter

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LOP103,74680.6%-3.439,61439.4%
ME11,0918.6%-0.886,03624.7%
LO10,1997.9%-0.845,70723.4%
Optic-unspecified3,6342.8%-0.263,03512.4%

Connectivity

Inputs

upstream
partner
#NTconns
Am1
%
In
CV
T5b1715ACh23,92638.1%0.3
T4b1690ACh18,32929.2%0.3
TmY5a1359Glu5,814.59.3%0.4
LPi124GABA2,950.54.7%0.0
DCH2GABA964.51.5%0.0
VCH2GABA737.51.2%0.0
H12Glu700.51.1%0.0
Tm2801ACh6141.0%0.5
Tm3675ACh556.50.9%0.7
OLVC32ACh5310.8%0.0
LPi1433Glu4480.7%0.3
Li382GABA431.50.7%0.0
Mi10373ACh4150.7%0.6
TmY14360unc4010.6%0.7
MeVPOL12ACh3830.6%0.0
Tlp1168Glu310.50.5%0.5
Tlp12130Glu302.50.5%0.7
LPT236ACh2450.4%0.4
Nod52ACh238.50.4%0.0
Y12149Glu221.50.4%0.7
LPC1165ACh183.50.3%0.6
T5d175ACh176.50.3%1.0
T4d155ACh164.50.3%1.1
LPi4a34Glu1590.3%0.4
T4c233ACh1450.2%0.4
T5c218ACh1360.2%0.5
Y14118Glu123.50.2%0.6
TmY3179ACh120.50.2%0.6
MeVC252Glu119.50.2%0.0
Pm727GABA1160.2%0.6
LPT10035ACh115.50.2%0.9
OA-AL2i12unc1090.2%0.0
T2130ACh97.50.2%0.5
OA-AL2i24OA93.50.1%0.1
TmY19a61GABA930.1%0.9
T5a135ACh91.50.1%0.6
T4a106ACh81.50.1%0.8
Pm347GABA78.50.1%0.8
LT662ACh780.1%0.0
Y1385Glu72.50.1%0.7
Tm482ACh710.1%0.7
Mi4105GABA67.50.1%0.5
LLPC348ACh630.1%1.0
LPi2c42Glu630.1%1.0
TmY1578GABA620.1%0.8
LPC246ACh560.1%0.8
Tlp1437Glu550.1%0.6
LPi2b2GABA540.1%0.0
LPi2d40Glu52.50.1%0.6
Mi972Glu51.50.1%0.4
TmY480ACh51.50.1%0.6
Tlp1359Glu50.50.1%0.6
TmY2077ACh500.1%0.5
Y1144Glu49.50.1%1.8
LPi212GABA44.50.1%0.0
Pm1043GABA42.50.1%0.7
T352ACh41.50.1%0.5
TmY1866ACh39.50.1%0.4
LPi341244Glu390.1%0.5
LPi2e31Glu350.1%1.9
Y348ACh29.50.0%0.4
Tm144ACh260.0%0.5
LLPC134ACh24.50.0%0.8
Tm1235ACh21.50.0%0.3
LPi4b2GABA21.50.0%0.0
MeVPLp22Glu200.0%0.0
Tm5Y30ACh190.0%0.4
TmY1614Glu18.50.0%1.2
LPLC126ACh18.50.0%0.5
LPT302ACh180.0%0.0
TmY1722ACh17.50.0%0.8
LOP_unclear3Glu170.0%0.6
LOLP119GABA15.50.0%0.4
Tm2318GABA15.50.0%0.5
MeVC112ACh150.0%0.0
LPT1015ACh140.0%0.2
MeVC262ACh140.0%0.0
Tm3721Glu140.0%0.4
H22ACh13.50.0%0.0
Mi126ACh13.50.0%0.1
T2a20ACh130.0%0.6
LLPC28ACh120.0%0.5
Pm114GABA11.50.0%0.2
LPLC218ACh11.50.0%0.4
TmY9a21ACh11.50.0%0.2
LPi346Glu10.50.0%0.7
LPT11410GABA10.50.0%0.5
LPT1166GABA90.0%0.6
TmY9b16ACh90.0%0.3
LPi3b10Glu8.50.0%0.5
MeLo811GABA80.0%0.4
LPi4313Glu80.0%0.3
Pm115GABA80.0%0.1
MeVC122ACh7.50.0%0.0
HSS2ACh7.50.0%0.0
LPT512Glu7.50.0%0.0
LPi3a11Glu7.50.0%0.6
LPT11113GABA7.50.0%0.2
LPi3c8Glu70.0%0.7
LoVC224DA70.0%0.3
LC14b8ACh70.0%0.5
TmY1311ACh70.0%0.5
LPT492ACh70.0%0.0
LOP_ME_unclear1Glu6.50.0%0.0
LPT1126GABA6.50.0%0.3
MeVPLp12ACh6.50.0%0.0
5-HTPMPV0325-HT6.50.0%0.0
LPT262ACh60.0%0.0
VST24ACh60.0%0.4
LPT602ACh60.0%0.0
LPT572ACh60.0%0.0
DNc022unc60.0%0.0
Li287GABA5.50.0%0.2
MeVP46ACh5.50.0%0.3
Pm411GABA5.50.0%0.0
Tm910ACh5.50.0%0.2
VS4ACh5.50.0%0.6
Li297GABA5.50.0%0.4
MeVPLo13Glu50.0%0.1
TmY1010ACh50.0%0.0
dCal12GABA50.0%0.0
T4_unclear3ACh4.50.0%0.7
LPT542ACh4.50.0%0.0
LPT212ACh4.50.0%0.0
TmY19b6GABA4.50.0%0.3
Li178GABA4.50.0%0.1
LPT592Glu40.0%0.0
Li256GABA40.0%0.2
Tm68ACh40.0%0.0
LPT272ACh40.0%0.0
LPT282ACh40.0%0.0
TmY_unclear1ACh3.50.0%0.0
LPT1132GABA3.50.0%0.7
DNc012unc3.50.0%0.0
TmY217ACh3.50.0%0.0
LOP_LO_unclear1Glu30.0%0.0
Tm5c5Glu30.0%0.0
MeLo96Glu30.0%0.0
LPLC45ACh30.0%0.1
C36GABA30.0%0.0
OLVC11ACh2.50.0%0.0
LPT532GABA2.50.0%0.0
MeLo133Glu2.50.0%0.0
LT332GABA2.50.0%0.0
OLVp_unclear1ACh20.0%0.0
Li311Glu20.0%0.0
ME_LOP_unclear1Glu20.0%0.0
MeVC51ACh20.0%0.0
Pm83GABA20.0%0.4
Li303GABA20.0%0.2
DNp272ACh20.0%0.0
MeLo114Glu20.0%0.0
LoVC211GABA1.50.0%0.0
OLVC21GABA1.50.0%0.0
AN27X0132unc1.50.0%0.3
Tm242ACh1.50.0%0.0
LPT292ACh1.50.0%0.0
V12ACh1.50.0%0.0
LPT1153GABA1.50.0%0.0
LoVC163Glu1.50.0%0.0
Pm61GABA10.0%0.0
LoVC141GABA10.0%0.0
MeVPMe21Glu10.0%0.0
MeLo121Glu10.0%0.0
LC171ACh10.0%0.0
DNp301Glu10.0%0.0
Mi132Glu10.0%0.0
Nod12ACh10.0%0.0
Mi22Glu10.0%0.0
LC42ACh10.0%0.0
C22GABA10.0%0.0
Pm2a2GABA10.0%0.0
LC182ACh10.0%0.0
LC122ACh10.0%0.0
Nod32ACh10.0%0.0
Li152GABA10.0%0.0
LPT222GABA10.0%0.0
LPT502GABA10.0%0.0
MeLo141Glu0.50.0%0.0
OLVC71Glu0.50.0%0.0
AN09A0051unc0.50.0%0.0
Tm341Glu0.50.0%0.0
Tm261ACh0.50.0%0.0
Pm51GABA0.50.0%0.0
Li261GABA0.50.0%0.0
LoVP_unclear1ACh0.50.0%0.0
vCal31ACh0.50.0%0.0
Nod41ACh0.50.0%0.0
LT111GABA0.50.0%0.0
HSE1ACh0.50.0%0.0
vCal21Glu0.50.0%0.0
LPT1101ACh0.50.0%0.0
Tm301GABA0.50.0%0.0
Tm201ACh0.50.0%0.0
Tm391ACh0.50.0%0.0
Tm311GABA0.50.0%0.0
MeLo71ACh0.50.0%0.0
Pm7_Li281GABA0.50.0%0.0
VST11ACh0.50.0%0.0
MeLo101Glu0.50.0%0.0
LoVC61GABA0.50.0%0.0
CT11GABA0.50.0%0.0

Outputs

downstream
partner
#NTconns
Am1
%
Out
CV
TmY14477unc7,434.516.2%0.3
Tm21662ACh3,5387.7%0.5
TmY15209GABA3,2767.1%0.5
T21491ACh2,6315.7%0.5
Tm61340ACh2,3975.2%0.6
Tm31725ACh2,173.54.7%0.5
TmY181105ACh1,620.53.5%0.6
T4c1217ACh1,398.53.0%0.6
LPi212GABA1,303.52.8%0.0
T4d1186ACh1,287.52.8%0.6
Y3594ACh1,243.52.7%0.6
LC4126ACh1,167.52.5%0.3
LPC1224ACh1,0932.4%0.4
DCH2GABA9072.0%0.0
T4b969ACh858.51.9%0.6
LLPC1274ACh851.51.9%0.6
T5c950ACh8401.8%0.6
TmY19a86GABA8101.8%0.7
LPLC1134ACh7841.7%0.5
T5d817ACh6741.5%0.6
LPT236ACh601.51.3%0.2
Tlp1168Glu590.51.3%0.4
T4a748ACh560.51.2%0.5
T5b798ACh559.51.2%0.5
VCH2GABA553.51.2%0.0
Tm2333GABA4631.0%0.4
Y14186Glu440.51.0%0.7
T3559ACh4140.9%0.5
Y11128Glu353.50.8%0.7
LPi2e92Glu279.50.6%0.7
T5a442ACh2740.6%0.4
TmY5a420Glu2670.6%0.4
Pm4109GABA2310.5%0.8
T2a345ACh218.50.5%0.4
TmY3287ACh1910.4%0.5
LPLC482ACh153.50.3%0.8
Tlp1298Glu1370.3%0.9
HSN2ACh135.50.3%0.0
Tm12227ACh134.50.3%0.4
MeVP435ACh1330.3%0.5
LPi1433Glu1080.2%0.5
HST2ACh1050.2%0.0
Pm352GABA1050.2%0.8
Y13107Glu100.50.2%0.6
TmY4145ACh98.50.2%0.5
Tm1695ACh960.2%0.5
LLPC3111ACh940.2%0.6
LPT318ACh90.50.2%0.3
HSE2ACh87.50.2%0.0
LLPC287ACh870.2%1.2
LC12121ACh840.2%0.5
dCal12GABA780.2%0.0
LPi2c49Glu76.50.2%0.6
TmY2082ACh65.50.1%0.9
OA-AL2i24OA560.1%0.1
Tlp1334Glu500.1%1.0
LPLC263ACh500.1%0.8
Tlp1428Glu48.50.1%0.9
Y1251Glu450.1%0.9
Tm180ACh430.1%0.2
TmY1362ACh410.1%0.5
Tm976ACh400.1%0.2
TmY1652Glu35.50.1%0.5
TmY1729ACh34.50.1%0.9
LPi3438Glu33.50.1%0.8
OA-AL2i12unc330.1%0.0
H22ACh32.50.1%0.0
VST27ACh320.1%0.2
LPi4a24Glu31.50.1%0.6
LPT514Glu310.1%0.2
Tm5Y55ACh310.1%0.3
TmY19b23GABA300.1%0.5
LPi124GABA28.50.1%0.2
LPi2d29Glu280.1%0.6
LPT10111ACh280.1%0.4
Nod22GABA260.1%0.0
Tm442ACh25.50.1%0.4
Mi143ACh24.50.1%0.3
LC1836ACh230.1%0.4
LPi3c11Glu220.0%0.4
MeVPOL12ACh220.0%0.0
LPi2b2GABA21.50.0%0.0
Pm1030GABA19.50.0%0.4
vCal12Glu190.0%0.0
LPT262ACh18.50.0%0.0
Pm114GABA17.50.0%0.2
Nod42ACh17.50.0%0.0
TmY9a32ACh17.50.0%0.3
LPC215ACh16.50.0%0.6
Mi1329Glu16.50.0%0.5
VS11ACh160.0%0.5
Tm2424ACh160.0%0.4
LPT10017ACh150.0%0.7
H12Glu14.50.0%0.0
Pm715GABA14.50.0%0.5
LPi3b12Glu140.0%0.6
TmY1016ACh13.50.0%0.6
LC31a13ACh13.50.0%0.8
TmY9b19ACh12.50.0%0.2
Tm2023ACh120.0%0.1
LPi341212Glu11.50.0%0.5
MeTu4c11ACh11.50.0%0.5
LOP_unclear2Glu110.0%0.0
MeVC252Glu110.0%0.0
LPT222GABA110.0%0.0
LPi3a5Glu110.0%1.0
vCal22Glu10.50.0%0.0
Tm3718Glu9.50.0%0.2
Li382GABA90.0%0.0
LPT282ACh90.0%0.0
HSS2ACh8.50.0%0.0
Tm5c15Glu8.50.0%0.3
Pm115GABA8.50.0%0.3
MeLo89GABA80.0%0.4
Li297GABA80.0%0.5
LPi4b2GABA7.50.0%0.0
VST14ACh7.50.0%0.5
TmY2114ACh7.50.0%0.2
Li2811GABA7.50.0%0.3
vCal32ACh70.0%0.0
LT332GABA70.0%0.0
ME_unclear3Glu6.50.0%0.3
Mi1011ACh6.50.0%0.3
C210GABA6.50.0%0.4
MeLo97Glu60.0%0.4
Nod52ACh60.0%0.0
MeVPMe25Glu60.0%0.5
LT662ACh60.0%0.0
Mi411GABA5.50.0%0.0
LPi435Glu50.0%0.5
CT12GABA50.0%0.0
LOLP19GABA50.0%0.2
Nod32ACh4.50.0%0.0
LPT542ACh4.50.0%0.0
Pm2a6GABA4.50.0%0.5
Lawf28ACh4.50.0%0.2
DNc022unc4.50.0%0.0
Tm345Glu4.50.0%0.3
MeLo77ACh4.50.0%0.3
LOP_ME_unclear3Glu40.0%0.5
LPT272ACh40.0%0.0
LPT212ACh40.0%0.0
Li372Glu3.50.0%0.0
LoVC222DA3.50.0%0.0
MeVPLo14Glu3.50.0%0.3
OLVC32ACh3.50.0%0.0
MeLo117Glu3.50.0%0.0
LoVP_unclear1ACh30.0%0.0
Y_unclear1ACh30.0%0.0
LPT1134GABA30.0%0.6
Nod12ACh30.0%0.0
MeLo146Glu30.0%0.0
Mi96Glu30.0%0.0
VSm4ACh30.0%0.3
LOP_LO_unclear1Glu2.50.0%0.0
LPT1114GABA2.50.0%0.3
LoVC212GABA2.50.0%0.0
AN27X0133unc2.50.0%0.3
MeVPLp12ACh2.50.0%0.0
Tm365ACh2.50.0%0.0
Tm295Glu2.50.0%0.0
LPT502GABA2.50.0%0.0
C34GABA2.50.0%0.2
MeLo135Glu2.50.0%0.0
Mi24Glu2.50.0%0.0
Tm5a5ACh2.50.0%0.0
Li255GABA2.50.0%0.0
LpMe_unclear2Glu20.0%0.5
Tm303GABA20.0%0.4
MeVP242ACh20.0%0.0
MeVC112ACh20.0%0.0
Tm384ACh20.0%0.0
Li303GABA20.0%0.0
Li262GABA1.50.0%0.3
Li172GABA1.50.0%0.3
LC232ACh1.50.0%0.3
LPT1142GABA1.50.0%0.3
MeVPMe12Glu1.50.0%0.3
Tm393ACh1.50.0%0.0
MeVPLp22Glu1.50.0%0.0
DNc012unc1.50.0%0.0
LPT602ACh1.50.0%0.0
DNp302Glu1.50.0%0.0
LPT1123GABA1.50.0%0.0
LPT521ACh10.0%0.0
LT111GABA10.0%0.0
Li391GABA10.0%0.0
LC171ACh10.0%0.0
Pm7_Li281GABA10.0%0.0
Tm5b2ACh10.0%0.0
T4_unclear2ACh10.0%0.0
Pm82GABA10.0%0.0
Tm332ACh10.0%0.0
LC10_unclear2ACh10.0%0.0
LC152ACh10.0%0.0
Tm262ACh10.0%0.0
Pm52GABA10.0%0.0
Mi192unc10.0%0.0
V12ACh10.0%0.0
TmY_unclear2ACh10.0%0.0
Pm61GABA0.50.0%0.0
Tm321Glu0.50.0%0.0
LoVC241GABA0.50.0%0.0
LPT531GABA0.50.0%0.0
LPT571ACh0.50.0%0.0
5-HTPMPV0315-HT0.50.0%0.0
Pm91GABA0.50.0%0.0
LPT301ACh0.50.0%0.0
LC10d1ACh0.50.0%0.0
LPT1151GABA0.50.0%0.0
LLPC41ACh0.50.0%0.0
LPT291ACh0.50.0%0.0
LoVC131GABA0.50.0%0.0
MeVC121ACh0.50.0%0.0
LT61a1ACh0.50.0%0.0
MeVP511Glu0.50.0%0.0
MeVC261ACh0.50.0%0.0
MeTu4b1ACh0.50.0%0.0
MeTu4e1ACh0.50.0%0.0
LPC_unclear1ACh0.50.0%0.0
MeTu3c1ACh0.50.0%0.0
Li141Glu0.50.0%0.0
LLPC_unclear1ACh0.50.0%0.0
Li151GABA0.50.0%0.0
LC91ACh0.50.0%0.0