Male CNS – Cell Type Explorer

ATL013(L)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
729
Total Synapses
Post: 307 | Pre: 422
log ratio : 0.46
364.5
Mean Synapses
Post: 153.5 | Pre: 211
log ratio : 0.46
ACh(89.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (14 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(L)8327.0%0.078720.6%
CentralBrain-unspecified4314.0%0.847718.2%
ATL(L)8929.0%-1.62296.9%
SMP(R)144.6%2.729221.8%
ATL(R)134.2%2.306415.2%
SIP(L)113.6%1.35286.6%
PLP(L)278.8%-inf00.0%
SLP(L)20.7%3.32204.7%
SCL(L)123.9%-2.0030.7%
SIP(R)82.6%-1.4230.7%
CRE(L)10.3%3.1792.1%
CRE(R)10.3%3.1792.1%
IB20.7%-1.0010.2%
CA(L)10.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
ATL013
%
In
CV
PLP247 (L)1Glu18.513.9%0.0
PLP247 (R)1Glu11.58.6%0.0
M_lvPNm48 (L)2ACh8.56.4%0.5
ATL013 (R)2ACh8.56.4%0.1
ATL041 (R)1ACh6.54.9%0.0
PS157 (L)1GABA6.54.9%0.0
ATL013 (L)2ACh64.5%0.2
PLP071 (L)2ACh4.53.4%0.3
SMP183 (L)1ACh2.51.9%0.0
CB2870 (R)1ACh2.51.9%0.0
M_lvPNm47 (L)1ACh21.5%0.0
ATL030 (L)1Glu21.5%0.0
CB2870 (L)1ACh21.5%0.0
ExR3 (R)15-HT21.5%0.0
ATL020 (L)1ACh1.51.1%0.0
SMP441 (L)1Glu1.51.1%0.0
WED182 (L)1ACh1.51.1%0.0
FB6M (R)2Glu1.51.1%0.3
PLP071 (R)2ACh1.51.1%0.3
ATL025 (R)1ACh10.7%0.0
ATL008 (R)1Glu10.7%0.0
FS4C (R)1ACh10.7%0.0
ATL032 (R)1unc10.7%0.0
SMP045 (R)1Glu10.7%0.0
M_l2PNm14 (L)1ACh10.7%0.0
CB4019 (L)1ACh10.7%0.0
ATL007 (R)1Glu10.7%0.0
CB1654 (L)1ACh10.7%0.0
FB2I_a (L)1Glu10.7%0.0
SMP409 (L)2ACh10.7%0.0
SMP045 (L)1Glu10.7%0.0
ATL042 (L)1unc10.7%0.0
ExR3 (L)15-HT10.7%0.0
M_l2PNm16 (L)2ACh10.7%0.0
FS4B (L)2ACh10.7%0.0
SLP359 (R)2ACh10.7%0.0
SLP457 (L)2unc10.7%0.0
FB7A (L)1Glu0.50.4%0.0
LHAV6c1 (L)1Glu0.50.4%0.0
SMP595 (L)1Glu0.50.4%0.0
FB6M (L)1Glu0.50.4%0.0
PPL105 (L)1DA0.50.4%0.0
ATL019 (L)1ACh0.50.4%0.0
CB1617 (L)1Glu0.50.4%0.0
FS2 (L)1ACh0.50.4%0.0
LHPV5g1_a (L)1ACh0.50.4%0.0
CB4156 (L)1unc0.50.4%0.0
ATL028 (L)1ACh0.50.4%0.0
LHPV5e2 (R)1ACh0.50.4%0.0
SMP239 (L)1ACh0.50.4%0.0
ER3d_a (R)1GABA0.50.4%0.0
FB2I_a (R)1Glu0.50.4%0.0
SMP183 (R)1ACh0.50.4%0.0
M_l2PNm14 (R)1ACh0.50.4%0.0
CSD (R)15-HT0.50.4%0.0
ATL023 (L)1Glu0.50.4%0.0
ER3a_c (R)1GABA0.50.4%0.0
LHPV2i1 (L)1ACh0.50.4%0.0
PPL204 (R)1DA0.50.4%0.0
CB2787 (L)1ACh0.50.4%0.0
FS3_d (R)1ACh0.50.4%0.0
FS4A (L)1ACh0.50.4%0.0
FS1B_b (R)1ACh0.50.4%0.0
SMP018 (L)1ACh0.50.4%0.0
CB4201 (L)1ACh0.50.4%0.0
SMP016_a (L)1ACh0.50.4%0.0
ATL009 (L)1GABA0.50.4%0.0
CB1849 (L)1ACh0.50.4%0.0
SMP408_a (L)1ACh0.50.4%0.0
CB1818 (R)1ACh0.50.4%0.0
ATL005 (R)1Glu0.50.4%0.0
ATL039 (L)1ACh0.50.4%0.0
ATL022 (L)1ACh0.50.4%0.0
PLP156 (R)1ACh0.50.4%0.0
ATL026 (R)1ACh0.50.4%0.0
LHPD5f1 (L)1Glu0.50.4%0.0
ATL025 (L)1ACh0.50.4%0.0
ATL027 (R)1ACh0.50.4%0.0
ATL003 (L)1Glu0.50.4%0.0
MeVP34 (L)1ACh0.50.4%0.0
ATL041 (L)1ACh0.50.4%0.0
ATL008 (L)1Glu0.50.4%0.0
SLP457 (R)1unc0.50.4%0.0
SMP181 (L)1unc0.50.4%0.0
SMP237 (L)1ACh0.50.4%0.0
LHAV3p1 (L)1Glu0.50.4%0.0

Outputs

downstream
partner
#NTconns
ATL013
%
Out
CV
FB2I_a (R)5Glu41.512.7%0.2
FB2I_a (L)5Glu24.57.5%0.5
PLP247 (R)1Glu15.54.8%0.0
FB1G (R)1ACh144.3%0.0
FB1G (L)1ACh10.53.2%0.0
PLP247 (L)1Glu103.1%0.0
FB6M (R)2Glu9.52.9%0.5
ATL013 (R)2ACh92.8%0.2
SMP388 (R)1ACh8.52.6%0.0
ATL013 (L)2ACh61.8%0.2
SAF (L)2Glu61.8%0.3
AOTU047 (L)1Glu5.51.7%0.0
FB6M (L)2Glu5.51.7%0.6
SMP409 (L)2ACh51.5%0.8
SMP409 (R)2ACh51.5%0.6
FB1D (L)2Glu51.5%0.0
FS4B (L)4ACh4.51.4%0.4
FS4B (R)4ACh4.51.4%0.5
CB4157 (L)2Glu41.2%0.2
CB4155 (L)3GABA41.2%0.5
AOTU041 (R)2GABA3.51.1%0.7
SMP388 (L)1ACh30.9%0.0
LHPV5l1 (L)1ACh30.9%0.0
LAL013 (L)1ACh2.50.8%0.0
LHPV3c1 (R)1ACh2.50.8%0.0
FB2E (R)1Glu2.50.8%0.0
SAF (R)2Glu2.50.8%0.2
CB1685 (L)3Glu2.50.8%0.3
ATL020 (L)2ACh20.6%0.5
SMP188 (L)1ACh20.6%0.0
LHPD2d2 (R)1Glu20.6%0.0
LHPV6m1 (R)1Glu20.6%0.0
CL234 (R)1Glu20.6%0.0
SIP064 (R)1ACh20.6%0.0
FB2D (R)2Glu20.6%0.5
SMP166 (R)1GABA1.50.5%0.0
SLP414 (L)1Glu1.50.5%0.0
FB1E_b (L)1Glu1.50.5%0.0
FB4L (R)1DA1.50.5%0.0
SLP322 (R)1ACh1.50.5%0.0
SMP183 (R)1ACh1.50.5%0.0
LAL013 (R)1ACh1.50.5%0.0
SA2_b (L)2Glu1.50.5%0.3
ATL025 (L)1ACh1.50.5%0.0
SMP045 (L)1Glu1.50.5%0.0
FS1B_b (L)3ACh1.50.5%0.0
SMP167 (R)2unc1.50.5%0.3
CRE108 (R)1ACh10.3%0.0
IB018 (R)1ACh10.3%0.0
SMP142 (L)1unc10.3%0.0
SMP305 (L)1unc10.3%0.0
SLP444 (R)1unc10.3%0.0
ATL014 (L)1Glu10.3%0.0
ATL043 (L)1unc10.3%0.0
SIP086 (R)1Glu10.3%0.0
SLP398 (L)1ACh10.3%0.0
SMP408_c (L)1ACh10.3%0.0
CB4183 (L)1ACh10.3%0.0
SMP239 (L)1ACh10.3%0.0
CB1744 (R)1ACh10.3%0.0
CL234 (L)1Glu10.3%0.0
ExR3 (L)15-HT10.3%0.0
MeVC27 (L)1unc10.3%0.0
SLP457 (L)1unc10.3%0.0
SMP374 (L)2Glu10.3%0.0
SMP374 (R)1Glu10.3%0.0
ATL025 (R)1ACh10.3%0.0
IB047 (L)1ACh10.3%0.0
SLP322 (L)2ACh10.3%0.0
FS4A (L)2ACh10.3%0.0
CB4155 (R)2GABA10.3%0.0
SMP018 (R)2ACh10.3%0.0
ATL009 (L)1GABA10.3%0.0
FS2 (L)2ACh10.3%0.0
FS3_d (R)2ACh10.3%0.0
PS258 (L)1ACh0.50.2%0.0
SMP155 (R)1GABA0.50.2%0.0
SMP017 (R)1ACh0.50.2%0.0
LHPV5a3 (L)1ACh0.50.2%0.0
FB5Z (R)1Glu0.50.2%0.0
FB8A (L)1Glu0.50.2%0.0
SA2_c (L)1Glu0.50.2%0.0
FB9B_d (L)1Glu0.50.2%0.0
CB1617 (L)1Glu0.50.2%0.0
CB4156 (L)1unc0.50.2%0.0
CB4133 (L)1Glu0.50.2%0.0
SMP180 (L)1ACh0.50.2%0.0
SMP408_b (L)1ACh0.50.2%0.0
FB6T (L)1Glu0.50.2%0.0
LHPV5e2 (R)1ACh0.50.2%0.0
SLP273 (L)1ACh0.50.2%0.0
CB1212 (L)1Glu0.50.2%0.0
M_lvPNm47 (L)1ACh0.50.2%0.0
ATL009 (R)1GABA0.50.2%0.0
CL008 (R)1Glu0.50.2%0.0
SLP359 (R)1ACh0.50.2%0.0
SMP373 (R)1ACh0.50.2%0.0
LAL147_a (L)1Glu0.50.2%0.0
ATL012 (R)1ACh0.50.2%0.0
VP2+Z_lvPN (L)1ACh0.50.2%0.0
SMP188 (R)1ACh0.50.2%0.0
SIP026 (R)1Glu0.50.2%0.0
SMP505 (L)1ACh0.50.2%0.0
CL136 (R)1ACh0.50.2%0.0
SMP235 (L)1Glu0.50.2%0.0
SMP384 (R)1unc0.50.2%0.0
CL010 (R)1Glu0.50.2%0.0
LHPV3c1 (L)1ACh0.50.2%0.0
DGI (R)1Glu0.50.2%0.0
SIP029 (R)1ACh0.50.2%0.0
OA-VPM3 (R)1OA0.50.2%0.0
ER3a_c (R)1GABA0.50.2%0.0
SMP490 (R)1ACh0.50.2%0.0
SMP178 (L)1ACh0.50.2%0.0
ExR7 (R)1ACh0.50.2%0.0
FB5W_a (L)1Glu0.50.2%0.0
ExR3 (R)15-HT0.50.2%0.0
SMP048 (L)1ACh0.50.2%0.0
PPL104 (L)1DA0.50.2%0.0
SIP066 (L)1Glu0.50.2%0.0
SMP238 (R)1ACh0.50.2%0.0
ATL007 (L)1Glu0.50.2%0.0
FS3_c (L)1ACh0.50.2%0.0
CB4157 (R)1Glu0.50.2%0.0
M_lPNm12 (L)1ACh0.50.2%0.0
FS4C (R)1ACh0.50.2%0.0
SMP167 (L)1unc0.50.2%0.0
SMP016_a (L)1ACh0.50.2%0.0
FS3_b (L)1ACh0.50.2%0.0
PFL3 (L)1ACh0.50.2%0.0
SA2_a (L)1Glu0.50.2%0.0
SMP408_a (R)1ACh0.50.2%0.0
SMP166 (L)1GABA0.50.2%0.0
CB3113 (R)1ACh0.50.2%0.0
SMP257 (L)1ACh0.50.2%0.0
CB2937 (L)1Glu0.50.2%0.0
ATL039 (L)1ACh0.50.2%0.0
SMP441 (L)1Glu0.50.2%0.0
WED143_d (L)1ACh0.50.2%0.0
SMP145 (L)1unc0.50.2%0.0
SMP187 (R)1ACh0.50.2%0.0
SMP239 (R)1ACh0.50.2%0.0
FB3C (L)1GABA0.50.2%0.0
PLP026 (L)1GABA0.50.2%0.0
SMP189 (R)1ACh0.50.2%0.0
ATL044 (R)1ACh0.50.2%0.0
PLP071 (R)1ACh0.50.2%0.0
CRE078 (R)1ACh0.50.2%0.0
FB2A (R)1DA0.50.2%0.0
ATL032 (R)1unc0.50.2%0.0
SMP045 (R)1Glu0.50.2%0.0
ATL003 (L)1Glu0.50.2%0.0
MeVP34 (L)1ACh0.50.2%0.0
SIP064 (L)1ACh0.50.2%0.0
CL008 (L)1Glu0.50.2%0.0
ATL041 (R)1ACh0.50.2%0.0
SMP183 (L)1ACh0.50.2%0.0
FB4C (L)1Glu0.50.2%0.0
ATL041 (L)1ACh0.50.2%0.0
ATL030 (L)1Glu0.50.2%0.0
SMP185 (R)1ACh0.50.2%0.0
SMP272 (L)1ACh0.50.2%0.0
LHPV5e3 (R)1ACh0.50.2%0.0
ATL002 (L)1Glu0.50.2%0.0
CSD (R)15-HT0.50.2%0.0
IB018 (L)1ACh0.50.2%0.0