Male CNS – Cell Type Explorer

ATL003(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,488
Total Synapses
Post: 1,646 | Pre: 842
log ratio : -0.97
2,488
Mean Synapses
Post: 1,646 | Pre: 842
log ratio : -0.97
Glu(77.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
CRE(L)32419.7%0.1535942.6%
ATL(L)57434.9%-5.71111.3%
SMP(L)27316.6%-0.0127132.2%
SIP(L)1297.8%0.5919423.0%
IB23114.0%-inf00.0%
CentralBrain-unspecified1026.2%-5.0930.4%
SCL(L)100.6%-inf00.0%
SLP(L)30.2%0.4240.5%

Connectivity

Inputs

upstream
partner
#NTconns
ATL003
%
In
CV
ATL012 (L)2ACh1529.5%0.2
CRE017 (L)2ACh1418.8%0.1
ATL011 (L)1Glu915.7%0.0
ATL012 (R)2ACh613.8%0.4
ATL016 (L)1Glu583.6%0.0
LAL031 (L)2ACh583.6%0.2
ATL011 (R)1Glu503.1%0.0
oviIN (L)1GABA412.6%0.0
PS240 (L)3ACh412.6%0.1
ATL016 (R)1Glu342.1%0.0
ATL028 (L)1ACh342.1%0.0
ATL038 (L)1ACh332.1%0.0
ATL037 (L)1ACh332.1%0.0
LAL037 (L)2ACh332.1%0.2
ATL028 (R)1ACh322.0%0.0
LHPV5e3 (L)1ACh301.9%0.0
SMP112 (L)3ACh281.8%0.7
LHPV5e3 (R)1ACh251.6%0.0
ATL037 (R)1ACh241.5%0.0
CB1997 (R)5Glu201.3%0.4
ATL033 (L)1Glu191.2%0.0
WED076 (L)1GABA171.1%0.0
SMP089 (R)2Glu171.1%0.1
ATL034 (L)1Glu150.9%0.0
PLP247 (R)1Glu140.9%0.0
LAL148 (L)1Glu140.9%0.0
PLP247 (L)1Glu140.9%0.0
IB048 (L)1ACh120.8%0.0
ATL001 (L)1Glu120.8%0.0
ATL042 (L)1unc110.7%0.0
SMP081 (L)2Glu110.7%0.6
ATL039 (R)1ACh100.6%0.0
WED076 (R)1GABA100.6%0.0
ATL039 (L)1ACh90.6%0.0
oviIN (R)1GABA90.6%0.0
PLP071 (L)2ACh90.6%0.3
PS240 (R)3ACh90.6%0.5
CRE020 (L)1ACh80.5%0.0
SMP017 (L)1ACh80.5%0.0
CB3523 (L)1ACh80.5%0.0
SMP597 (L)1ACh80.5%0.0
ATL014 (L)1Glu80.5%0.0
CB1956 (L)2ACh80.5%0.8
AOTU024 (R)1ACh70.4%0.0
ATL043 (L)1unc70.4%0.0
ATL038 (R)1ACh70.4%0.0
ATL032 (R)1unc70.4%0.0
M_l2PNm14 (L)1ACh70.4%0.0
CRE005 (R)1ACh60.4%0.0
SMP441 (L)1Glu60.4%0.0
LHPD5f1 (L)1Glu60.4%0.0
ATL017 (L)1Glu60.4%0.0
ATL031 (R)1unc60.4%0.0
SMP081 (R)2Glu60.4%0.0
LHPV6f1 (L)3ACh60.4%0.4
ATL015 (L)1ACh50.3%0.0
ATL034 (R)1Glu50.3%0.0
LHPV10b1 (L)1ACh50.3%0.0
ATL033 (R)1Glu50.3%0.0
OA-VUMa6 (M)1OA50.3%0.0
LAL022 (L)2ACh50.3%0.2
LAL023 (L)2ACh50.3%0.2
ATL018 (L)2ACh50.3%0.2
IB014 (R)1GABA40.3%0.0
ATL031 (L)1unc40.3%0.0
IB020 (L)1ACh40.3%0.0
mALD1 (R)1GABA40.3%0.0
SIP081 (L)2ACh40.3%0.5
PLP231 (L)2ACh40.3%0.5
IB045 (R)2ACh40.3%0.5
LHPV6f1 (R)3ACh40.3%0.4
IB010 (L)1GABA30.2%0.0
ATL017 (R)1Glu30.2%0.0
PPL107 (L)1DA30.2%0.0
LAL011 (L)1ACh30.2%0.0
CB2694 (R)1Glu30.2%0.0
IB024 (L)1ACh30.2%0.0
ATL027 (R)1ACh30.2%0.0
ATL032 (L)1unc30.2%0.0
ATL027 (L)1ACh30.2%0.0
IB048 (R)1ACh30.2%0.0
AOTU024 (L)1ACh30.2%0.0
CB2117 (L)2ACh30.2%0.3
CRE003_b (L)2ACh30.2%0.3
PLP246 (L)1ACh20.1%0.0
SMP490 (R)1ACh20.1%0.0
CRE200m (L)1Glu20.1%0.0
PLP097 (L)1ACh20.1%0.0
ATL029 (L)1ACh20.1%0.0
IB049 (L)1ACh20.1%0.0
SMP022 (L)1Glu20.1%0.0
ATL019 (L)1ACh20.1%0.0
SMP248_d (L)1ACh20.1%0.0
SMP017 (R)1ACh20.1%0.0
PLP048 (L)1Glu20.1%0.0
LHPV5m1 (L)1ACh20.1%0.0
SMP016_b (L)1ACh20.1%0.0
CRE003_b (R)1ACh20.1%0.0
SMP408_a (L)1ACh20.1%0.0
CRE039_a (R)1Glu20.1%0.0
CL182 (L)1Glu20.1%0.0
CRE018 (L)1ACh20.1%0.0
PPL204 (L)1DA20.1%0.0
SMP568_a (R)1ACh20.1%0.0
PLP231 (R)1ACh20.1%0.0
SMP385 (R)1unc20.1%0.0
SMP541 (L)1Glu20.1%0.0
PS359 (R)1ACh20.1%0.0
OA-VPM3 (R)1OA20.1%0.0
SMP248_c (L)2ACh20.1%0.0
CB4155 (L)2GABA20.1%0.0
CRE095 (L)2ACh20.1%0.0
LAL150 (L)2Glu20.1%0.0
CRE103 (L)2ACh20.1%0.0
SMP143 (L)2unc20.1%0.0
SLP461 (L)1ACh10.1%0.0
SMP058 (L)1Glu10.1%0.0
CRE016 (L)1ACh10.1%0.0
IB051 (L)1ACh10.1%0.0
CB3204 (R)1ACh10.1%0.0
AN10B005 (L)1ACh10.1%0.0
SMP018 (L)1ACh10.1%0.0
PS269 (L)1ACh10.1%0.0
SMP145 (R)1unc10.1%0.0
ATL006 (L)1ACh10.1%0.0
ATL044 (L)1ACh10.1%0.0
PPL204 (R)1DA10.1%0.0
SMP142 (L)1unc10.1%0.0
CL357 (L)1unc10.1%0.0
SMP048 (L)1ACh10.1%0.0
ATL018 (R)1ACh10.1%0.0
ATL025 (R)1ACh10.1%0.0
CL225 (R)1ACh10.1%0.0
CB1846 (L)1Glu10.1%0.0
ATL013 (L)1ACh10.1%0.0
LHAV6c1 (L)1Glu10.1%0.0
PAM05 (L)1DA10.1%0.0
SMP008 (L)1ACh10.1%0.0
FS1B_a (R)1ACh10.1%0.0
CRE093 (L)1ACh10.1%0.0
SMP409 (L)1ACh10.1%0.0
FB5X (L)1Glu10.1%0.0
SMP452 (L)1Glu10.1%0.0
SMP180 (L)1ACh10.1%0.0
LAL034 (L)1ACh10.1%0.0
WED143_c (R)1ACh10.1%0.0
ATL005 (R)1Glu10.1%0.0
SMP111 (L)1ACh10.1%0.0
CB1997_b (R)1Glu10.1%0.0
SLP356 (L)1ACh10.1%0.0
CB3391 (L)1Glu10.1%0.0
LAL075 (R)1Glu10.1%0.0
SMP145 (L)1unc10.1%0.0
SMP568_b (R)1ACh10.1%0.0
FB2I_b (L)1Glu10.1%0.0
LAL149 (L)1Glu10.1%0.0
SMP568_a (L)1ACh10.1%0.0
IB045 (L)1ACh10.1%0.0
SMP458 (L)1ACh10.1%0.0
SMP568_c (L)1ACh10.1%0.0
SMP588 (R)1unc10.1%0.0
SMP377 (L)1ACh10.1%0.0
SMP531 (L)1Glu10.1%0.0
SMP189 (L)1ACh10.1%0.0
SMP577 (R)1ACh10.1%0.0
IB117 (L)1Glu10.1%0.0
SAD034 (L)1ACh10.1%0.0
ATL041 (L)1ACh10.1%0.0
ATL030 (L)1Glu10.1%0.0
SMP150 (L)1Glu10.1%0.0
LHPV8a1 (L)1ACh10.1%0.0
IB017 (L)1ACh10.1%0.0
ATL002 (L)1Glu10.1%0.0
SMP385 (L)1unc10.1%0.0
SIP087 (L)1unc10.1%0.0
IB120 (R)1Glu10.1%0.0
PS175 (L)1Glu10.1%0.0
IB120 (L)1Glu10.1%0.0
ATL042 (R)1unc10.1%0.0
PS159 (L)1ACh10.1%0.0
CRE011 (L)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
ATL003
%
Out
CV
SMP441 (L)1Glu21510.6%0.0
SMP597 (L)1ACh1447.1%0.0
SIP081 (L)2ACh1346.6%0.1
IB049 (L)2ACh1105.4%0.1
CRE017 (L)2ACh844.1%0.2
SMP409 (L)4ACh814.0%0.6
ATL015 (L)1ACh803.9%0.0
LAL022 (L)3ACh733.6%0.3
CB2117 (L)2ACh482.4%0.5
ATL040 (L)1Glu391.9%0.0
CB1956 (L)2ACh381.9%0.4
LAL031 (L)2ACh361.8%0.3
CRE074 (L)1Glu321.6%0.0
FB5X (L)3Glu321.6%0.7
LHPD5f1 (L)1Glu281.4%0.0
IB048 (L)1ACh281.4%0.0
CB3523 (L)1ACh271.3%0.0
SIP070 (L)2ACh261.3%0.4
CRE009 (L)1ACh241.2%0.0
LAL034 (L)4ACh231.1%0.6
AOTU063_a (L)1Glu221.1%0.0
oviIN (L)1GABA170.8%0.0
ATL001 (L)1Glu160.8%0.0
SMP006 (L)3ACh140.7%0.3
LoVP80 (L)2ACh130.6%0.8
SMP156 (L)1ACh120.6%0.0
FB5AB (L)1ACh120.6%0.0
CB4155 (L)3GABA120.6%0.6
FB4Q_b (L)1Glu110.5%0.0
CRE012 (L)1GABA100.5%0.0
SIP022 (L)1ACh100.5%0.0
CRE041 (L)1GABA100.5%0.0
LoVP81 (L)2ACh100.5%0.8
SLP328 (L)2ACh100.5%0.6
SMP112 (L)3ACh100.5%1.0
FB4N (L)1Glu90.4%0.0
SMP077 (L)1GABA90.4%0.0
LHPV5e3 (L)1ACh90.4%0.0
CRE011 (L)1ACh90.4%0.0
SMP008 (L)3ACh90.4%0.9
SMP408_a (L)2ACh90.4%0.3
ATL008 (R)1Glu80.4%0.0
ATL027 (L)1ACh80.4%0.0
SMP541 (L)1Glu80.4%0.0
CRE023 (L)1Glu80.4%0.0
LAL023 (L)2ACh80.4%0.8
PAM08 (L)2DA80.4%0.8
LoVP84 (L)2ACh80.4%0.8
CB3056 (L)2Glu80.4%0.0
LAL037 (L)1ACh70.3%0.0
SMP204 (L)1Glu70.3%0.0
AOTU028 (L)1ACh70.3%0.0
LAL115 (R)1ACh70.3%0.0
ATL008 (L)1Glu70.3%0.0
CRE107 (L)1Glu70.3%0.0
CRE078 (L)2ACh70.3%0.4
ATL004 (L)1Glu60.3%0.0
FB5F (L)1Glu60.3%0.0
SIP028 (L)2GABA60.3%0.3
CB1149 (L)2Glu60.3%0.3
SMP148 (L)2GABA60.3%0.3
SMP142 (L)1unc50.2%0.0
FB4X (L)1Glu50.2%0.0
LAL004 (L)1ACh50.2%0.0
CB3339 (L)1ACh50.2%0.0
FB4Q_c (L)1Glu50.2%0.0
CRE066 (L)1ACh50.2%0.0
SMP568_c (L)1ACh50.2%0.0
CRE009 (R)1ACh50.2%0.0
SMP385 (L)1unc50.2%0.0
CRE076 (L)1ACh50.2%0.0
CB1148 (L)2Glu50.2%0.6
SMP018 (L)3ACh50.2%0.6
ATL009 (L)2GABA50.2%0.2
CB1841 (L)2ACh50.2%0.2
LAL030_a (L)1ACh40.2%0.0
SMP142 (R)1unc40.2%0.0
SMP133 (L)1Glu40.2%0.0
LAL035 (L)1ACh40.2%0.0
FB5B (L)1Glu40.2%0.0
CRE039_a (R)1Glu40.2%0.0
CB1128 (L)1GABA40.2%0.0
ATL012 (L)1ACh40.2%0.0
FB5E (L)1Glu40.2%0.0
FB2M_b (L)1Glu40.2%0.0
CRE024 (R)1ACh40.2%0.0
CB2689 (L)1ACh40.2%0.0
SMP038 (L)1Glu40.2%0.0
SMP050 (L)1GABA40.2%0.0
oviIN (R)1GABA40.2%0.0
PAM04 (L)2DA40.2%0.5
CRE003_b (L)2ACh40.2%0.5
LAL050 (L)3GABA40.2%0.4
FB4P_a (L)2Glu40.2%0.0
CB4138 (L)4Glu40.2%0.0
CB2357 (L)1GABA30.1%0.0
SMP145 (R)1unc30.1%0.0
ATL029 (L)1ACh30.1%0.0
LAL011 (L)1ACh30.1%0.0
SMP595 (L)1Glu30.1%0.0
SIP003_a (R)1ACh30.1%0.0
SLP078 (L)1Glu30.1%0.0
CB4150 (L)1ACh30.1%0.0
CRE090 (L)1ACh30.1%0.0
FB4D_a (L)1Glu30.1%0.0
FB5I (L)1Glu30.1%0.0
CB2784 (L)2GABA30.1%0.3
CB1062 (R)2Glu30.1%0.3
CRE018 (L)2ACh30.1%0.3
MBON04 (L)1Glu20.1%0.0
FB6A_b (L)1Glu20.1%0.0
CRE042 (L)1GABA20.1%0.0
SMP542 (L)1Glu20.1%0.0
CRE200m (L)1Glu20.1%0.0
CRE005 (R)1ACh20.1%0.0
CRE099 (L)1ACh20.1%0.0
CB1361 (L)1Glu20.1%0.0
SIP074_b (L)1ACh20.1%0.0
FB2C (L)1Glu20.1%0.0
LHPV5j1 (L)1ACh20.1%0.0
LHPD2a4_a (L)1ACh20.1%0.0
FB2F_a (L)1Glu20.1%0.0
SMP111 (L)1ACh20.1%0.0
SMP085 (L)1Glu20.1%0.0
LAL052 (L)1Glu20.1%0.0
SMP082 (L)1Glu20.1%0.0
FB4F_a (L)1Glu20.1%0.0
FB4J (L)1Glu20.1%0.0
CB3252 (L)1Glu20.1%0.0
CB3910 (L)1ACh20.1%0.0
LAL115 (L)1ACh20.1%0.0
CRE085 (L)1ACh20.1%0.0
FB5Y_b (L)1Glu20.1%0.0
P1_8a (L)1ACh20.1%0.0
SLP473 (L)1ACh20.1%0.0
CRE102 (L)1Glu20.1%0.0
SMP143 (L)1unc20.1%0.0
IB020 (L)1ACh20.1%0.0
SMP385 (R)1unc20.1%0.0
LHPV10b1 (L)1ACh20.1%0.0
FB1G (L)1ACh20.1%0.0
AOTU035 (L)1Glu20.1%0.0
SMP199 (L)1ACh20.1%0.0
OA-VUMa6 (M)1OA20.1%0.0
CRE020 (L)2ACh20.1%0.0
SLP461 (L)1ACh10.0%0.0
SMP376 (L)1Glu10.0%0.0
FB5P (L)1Glu10.0%0.0
PLP246 (L)1ACh10.0%0.0
ATL043 (L)1unc10.0%0.0
LHPV10d1 (R)1ACh10.0%0.0
SMP254 (L)1ACh10.0%0.0
ATL036 (L)1Glu10.0%0.0
PLP247 (R)1Glu10.0%0.0
FB1H (L)1DA10.0%0.0
SMP011_b (L)1Glu10.0%0.0
ATL006 (L)1ACh10.0%0.0
SMP371_b (R)1Glu10.0%0.0
LAL040 (L)1GABA10.0%0.0
FB2F_b (L)1Glu10.0%0.0
SMP578 (L)1GABA10.0%0.0
SLP088_a (L)1Glu10.0%0.0
SMP377 (L)1ACh10.0%0.0
SIP004 (L)1ACh10.0%0.0
SMP081 (L)1Glu10.0%0.0
CRE013 (L)1GABA10.0%0.0
SMP248_d (L)1ACh10.0%0.0
SMP017 (L)1ACh10.0%0.0
ATL013 (L)1ACh10.0%0.0
CRE003_a (L)1ACh10.0%0.0
CB1935 (L)1Glu10.0%0.0
PAM01 (L)1DA10.0%0.0
SIP042_b (L)1Glu10.0%0.0
CB2136 (L)1Glu10.0%0.0
PAM06 (L)1DA10.0%0.0
LoVP83 (L)1ACh10.0%0.0
SMP055 (L)1Glu10.0%0.0
SLP245 (L)1ACh10.0%0.0
SMP072 (L)1Glu10.0%0.0
CB3391 (L)1Glu10.0%0.0
FB2F_d (L)1Glu10.0%0.0
CB2035 (L)1ACh10.0%0.0
AOTU022 (L)1GABA10.0%0.0
SMP180 (L)1ACh10.0%0.0
CRE095 (L)1ACh10.0%0.0
aIPg_m2 (L)1ACh10.0%0.0
CRE019 (L)1ACh10.0%0.0
CB3065 (L)1GABA10.0%0.0
ATL039 (L)1ACh10.0%0.0
CB2230 (L)1Glu10.0%0.0
ATL033 (L)1Glu10.0%0.0
FB2G_a (L)1Glu10.0%0.0
SLP087 (L)1Glu10.0%0.0
SMP059 (R)1Glu10.0%0.0
SIP032 (L)1ACh10.0%0.0
PLP028 (L)1unc10.0%0.0
LAL030_b (L)1ACh10.0%0.0
AOTU047 (L)1Glu10.0%0.0
SMP248_a (L)1ACh10.0%0.0
FB4A_b (L)1Glu10.0%0.0
SMP568_a (R)1ACh10.0%0.0
SMP069 (L)1Glu10.0%0.0
SMP489 (L)1ACh10.0%0.0
AVLP496 (L)1ACh10.0%0.0
ATL025 (L)1ACh10.0%0.0
SIP087 (R)1unc10.0%0.0
ATL011 (L)1Glu10.0%0.0
SIP065 (L)1Glu10.0%0.0
LAL155 (R)1ACh10.0%0.0
ATL038 (L)1ACh10.0%0.0
LHPD2c7 (L)1Glu10.0%0.0
LNd_c (L)1ACh10.0%0.0
ATL032 (L)1unc10.0%0.0
ATL018 (L)1ACh10.0%0.0
AVLP015 (L)1Glu10.0%0.0
LAL146 (L)1Glu10.0%0.0
SMP151 (R)1GABA10.0%0.0
SMP010 (L)1Glu10.0%0.0
CL021 (R)1ACh10.0%0.0
PLP247 (L)1Glu10.0%0.0
LHPV5e3 (R)1ACh10.0%0.0
SMP237 (L)1ACh10.0%0.0
ATL002 (L)1Glu10.0%0.0
CRE077 (L)1ACh10.0%0.0
LAL182 (L)1ACh10.0%0.0
SIP087 (L)1unc10.0%0.0
PPL103 (L)1DA10.0%0.0
SMP177 (R)1ACh10.0%0.0
OA-VPM3 (R)1OA10.0%0.0