Male CNS – Cell Type Explorer

ATL003

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
4,669
Total Synapses
Right: 2,181 | Left: 2,488
log ratio : 0.19
2,334.5
Mean Synapses
Right: 2,181 | Left: 2,488
log ratio : 0.19
Glu(77.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (11 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
CRE57619.0%0.2467841.3%
SMP53617.7%-0.0452231.8%
ATL89529.6%-5.64181.1%
SIP2468.1%0.6739123.8%
IB49916.5%-inf00.0%
CentralBrain-unspecified2197.2%-4.7780.5%
SLP250.8%-0.12231.4%
SCL200.7%-4.3210.1%
SPS80.3%-inf00.0%
LH20.1%-inf00.0%
aL00.0%inf20.1%

Connectivity

Inputs

upstream
partner
#NTconns
ATL003
%
In
CV
ATL0124ACh18712.8%0.1
CRE0174ACh134.59.2%0.1
ATL0112Glu126.58.7%0.0
ATL0162Glu75.55.2%0.0
LHPV5e32ACh553.8%0.0
ATL0282ACh50.53.5%0.0
LAL0314ACh493.4%0.3
PS2406ACh483.3%0.1
oviIN2GABA44.53.1%0.0
ATL0372ACh38.52.6%0.0
LAL0374ACh352.4%0.1
SMP1126ACh292.0%0.4
ATL0382ACh27.51.9%0.0
PLP2472Glu27.51.9%0.0
WED0762GABA26.51.8%0.0
CB199711Glu241.6%0.3
ATL0332Glu20.51.4%0.0
ATL0342Glu18.51.3%0.0
SMP0814Glu18.51.3%0.4
ATL0392ACh181.2%0.0
PLP0714ACh151.0%0.5
M_l2PNm142ACh13.50.9%0.0
SMP0894Glu12.50.9%0.0
IB0482ACh12.50.9%0.0
CB19565ACh11.50.8%1.0
SMP0173ACh110.8%0.0
AOTU0242ACh110.8%0.0
LAL1482Glu10.50.7%0.0
ATL0422unc8.50.6%0.0
SMP5972ACh8.50.6%0.0
ATL0322unc8.50.6%0.0
ATL0312unc8.50.6%0.0
ATL0012Glu70.5%0.0
ATL0432unc70.5%0.0
ATL0142Glu60.4%0.0
CRE0202ACh60.4%0.0
LAL0225ACh60.4%0.4
LHPV6f18ACh60.4%0.4
CB35232ACh5.50.4%0.0
IB0202ACh5.50.4%0.0
SIP0814ACh5.50.4%0.3
ATL0152ACh5.50.4%0.0
LHPD5f12Glu4.50.3%0.0
ATL0172Glu4.50.3%0.0
CB21175ACh4.50.3%0.1
PLP2314ACh4.50.3%0.3
ATL0272ACh4.50.3%0.0
IB0454ACh40.3%0.3
LHPV10b12ACh40.3%0.0
ATL0082Glu40.3%0.0
CRE0051ACh3.50.2%0.0
SMP4412Glu3.50.2%0.0
CRE039_a3Glu3.50.2%0.4
CRE0183ACh3.50.2%0.1
IB0493ACh3.50.2%0.1
ATL0451Glu30.2%0.0
SLP3612ACh30.2%0.3
ATL0183ACh30.2%0.1
SMP0184ACh30.2%0.4
mALD12GABA30.2%0.0
ATL0412ACh30.2%0.0
CRE003_b4ACh30.2%0.3
PPL2042DA30.2%0.0
OA-VUMa6 (M)1OA2.50.2%0.0
LAL0232ACh2.50.2%0.2
ATL0052Glu2.50.2%0.0
SMP568_a4ACh2.50.2%0.2
ATL0193ACh2.50.2%0.2
SMP3852unc2.50.2%0.0
IB0141GABA20.1%0.0
CL015_b1Glu20.1%0.0
IB0241ACh20.1%0.0
SMP1432unc20.1%0.5
IB0102GABA20.1%0.0
CB26942Glu20.1%0.0
SMP568_c2ACh20.1%0.0
ATL0062ACh20.1%0.0
SMP4093ACh20.1%0.2
CRE1033ACh20.1%0.2
LAL0344ACh20.1%0.0
SMP1422unc20.1%0.0
SIP0872unc20.1%0.0
PS1592ACh20.1%0.0
PPL1071DA1.50.1%0.0
LAL0111ACh1.50.1%0.0
SIP0711ACh1.50.1%0.0
WED1282ACh1.50.1%0.3
SMP016_b2ACh1.50.1%0.0
CRE0112ACh1.50.1%0.0
CB1997_b2Glu1.50.1%0.0
FB2I_b2Glu1.50.1%0.0
SMP248_c3ACh1.50.1%0.0
PLP2461ACh10.1%0.0
SMP4901ACh10.1%0.0
CRE200m1Glu10.1%0.0
PLP0971ACh10.1%0.0
ATL0291ACh10.1%0.0
SMP0221Glu10.1%0.0
SMP248_d1ACh10.1%0.0
PLP0481Glu10.1%0.0
LHPV5m11ACh10.1%0.0
SMP408_a1ACh10.1%0.0
CL1821Glu10.1%0.0
SMP5411Glu10.1%0.0
PS3591ACh10.1%0.0
OA-VPM31OA10.1%0.0
AOTU063_a1Glu10.1%0.0
CB16411Glu10.1%0.0
CB27871ACh10.1%0.0
SMP0121Glu10.1%0.0
AOTU0281ACh10.1%0.0
AOTU0141ACh10.1%0.0
LoVP671ACh10.1%0.0
SLP0701Glu10.1%0.0
CRE0741Glu10.1%0.0
ATL0251ACh10.1%0.0
CB41552GABA10.1%0.0
CRE0952ACh10.1%0.0
LAL0751Glu10.1%0.0
LAL1502Glu10.1%0.0
SMP0582Glu10.1%0.0
SMP1452unc10.1%0.0
LHAV6c12Glu10.1%0.0
SMP1112ACh10.1%0.0
SMP568_b2ACh10.1%0.0
SMP3772ACh10.1%0.0
IB1202Glu10.1%0.0
LHPV4m12ACh10.1%0.0
SLP4611ACh0.50.0%0.0
CRE0161ACh0.50.0%0.0
IB0511ACh0.50.0%0.0
CB32041ACh0.50.0%0.0
AN10B0051ACh0.50.0%0.0
PS2691ACh0.50.0%0.0
ATL0441ACh0.50.0%0.0
CL3571unc0.50.0%0.0
SMP0481ACh0.50.0%0.0
CL2251ACh0.50.0%0.0
CB18461Glu0.50.0%0.0
ATL0131ACh0.50.0%0.0
PAM051DA0.50.0%0.0
SMP0081ACh0.50.0%0.0
FS1B_a1ACh0.50.0%0.0
CRE0931ACh0.50.0%0.0
FB5X1Glu0.50.0%0.0
SMP4521Glu0.50.0%0.0
SMP1801ACh0.50.0%0.0
WED143_c1ACh0.50.0%0.0
SLP3561ACh0.50.0%0.0
CB33911Glu0.50.0%0.0
LAL1491Glu0.50.0%0.0
SMP4581ACh0.50.0%0.0
SMP5881unc0.50.0%0.0
SMP5311Glu0.50.0%0.0
SMP1891ACh0.50.0%0.0
SMP5771ACh0.50.0%0.0
IB1171Glu0.50.0%0.0
SAD0341ACh0.50.0%0.0
ATL0301Glu0.50.0%0.0
SMP1501Glu0.50.0%0.0
LHPV8a11ACh0.50.0%0.0
IB0171ACh0.50.0%0.0
ATL0021Glu0.50.0%0.0
PS1751Glu0.50.0%0.0
CB12271Glu0.50.0%0.0
VES0921GABA0.50.0%0.0
ATL0351Glu0.50.0%0.0
MBON121ACh0.50.0%0.0
SMP371_b1Glu0.50.0%0.0
SMP0101Glu0.50.0%0.0
CB23411ACh0.50.0%0.0
CL0071ACh0.50.0%0.0
CRE0781ACh0.50.0%0.0
ATL0221ACh0.50.0%0.0
SMP371_a1Glu0.50.0%0.0
CB28461ACh0.50.0%0.0
ATL0201ACh0.50.0%0.0
LAL030d1ACh0.50.0%0.0
SLP088_b1Glu0.50.0%0.0
CRE0101Glu0.50.0%0.0
SMP0191ACh0.50.0%0.0
CL1321Glu0.50.0%0.0
CB22301Glu0.50.0%0.0
PLP0281unc0.50.0%0.0
SLP360_c1ACh0.50.0%0.0
LHPV4c1_c1Glu0.50.0%0.0
SMP4051ACh0.50.0%0.0
SMP3621ACh0.50.0%0.0
PLP0261GABA0.50.0%0.0
SMP2831ACh0.50.0%0.0
LoVP241ACh0.50.0%0.0
SMP248_a1ACh0.50.0%0.0
CB18411ACh0.50.0%0.0
CRE0091ACh0.50.0%0.0
LoVP781ACh0.50.0%0.0
CL0081Glu0.50.0%0.0
SMP0381Glu0.50.0%0.0
SMP4041ACh0.50.0%0.0
CL1021ACh0.50.0%0.0
LoVP741ACh0.50.0%0.0
SLP4571unc0.50.0%0.0
LHPV9b11Glu0.50.0%0.0
SMP1811unc0.50.0%0.0
LoVP641Glu0.50.0%0.0
PS1571GABA0.50.0%0.0
SLP0661Glu0.50.0%0.0
CRE0761ACh0.50.0%0.0
CRE0421GABA0.50.0%0.0
PLP2591unc0.50.0%0.0
AOTU063_b1Glu0.50.0%0.0
M_l2PNl201ACh0.50.0%0.0

Outputs

downstream
partner
#NTconns
ATL003
%
Out
CV
SMP4412Glu194.510.2%0.0
SMP5972ACh1447.6%0.0
SIP0814ACh1236.5%0.1
CRE0174ACh91.54.8%0.2
IB0494ACh854.5%0.2
SMP4099ACh814.3%0.9
ATL0152ACh79.54.2%0.0
LAL0226ACh63.53.3%0.2
CB21175ACh402.1%0.5
SIP0705ACh331.7%0.5
ATL0402Glu32.51.7%0.0
CRE0742Glu31.51.7%0.0
LAL0314ACh291.5%0.2
LHPD5f12Glu26.51.4%0.0
CB19565ACh24.51.3%0.5
oviIN2GABA241.3%0.0
CRE0092ACh23.51.2%0.0
ATL0082Glu221.2%0.0
FB5X6Glu191.0%0.7
CB35232ACh18.51.0%0.0
IB0482ACh180.9%0.0
FB4Q_b2Glu170.9%0.0
AOTU063_a2Glu170.9%0.0
LAL0346ACh160.8%0.6
FB5AB2ACh150.8%0.0
SMP0066ACh130.7%0.3
ATL0012Glu110.6%0.0
SMP1126ACh110.6%0.8
FB4Q_c3Glu10.50.6%0.5
SMP0772GABA10.50.6%0.0
CB41555GABA100.5%0.5
ATL0123ACh9.50.5%0.0
LoVP803ACh9.50.5%0.6
SMP3852unc9.50.5%0.0
CB10624Glu90.5%0.5
LHPV5e32ACh7.50.4%0.0
LoVP814ACh7.50.4%0.5
SMP0085ACh7.50.4%0.6
CRE0232Glu7.50.4%0.0
LAL1152ACh70.4%0.0
SMP5412Glu70.4%0.0
SMP1562ACh6.50.3%0.0
ATL0112Glu6.50.3%0.0
CRE0412GABA6.50.3%0.0
FB4N2Glu6.50.3%0.0
CRE039_a4Glu6.50.3%0.5
SMP1422unc6.50.3%0.0
SIP0286GABA6.50.3%0.4
SIP0222ACh60.3%0.0
CB26892ACh60.3%0.0
FB5F2Glu60.3%0.0
ATL0062ACh5.50.3%0.0
CRE0112ACh5.50.3%0.0
CRE1022Glu5.50.3%0.0
PAM083DA5.50.3%0.5
CB11494Glu5.50.3%0.3
CRE0121GABA50.3%0.0
SLP3282ACh50.3%0.6
CB30652GABA50.3%0.0
CB30564Glu50.3%0.0
SMP2042Glu50.3%0.0
AOTU0282ACh50.3%0.0
CRE1072Glu50.3%0.0
ATL0042Glu50.3%0.0
SMP0502GABA50.3%0.0
CL0081Glu4.50.2%0.0
SMP408_a2ACh4.50.2%0.3
ATL0362Glu4.50.2%0.0
LAL0233ACh4.50.2%0.5
LoVP843ACh4.50.2%0.5
CRE0242ACh4.50.2%0.0
ATL0271ACh40.2%0.0
LAL0372ACh40.2%0.0
FB2F_b3Glu40.2%0.5
CRE0783ACh40.2%0.3
CRE0185ACh40.2%0.5
SMP1332Glu40.2%0.0
FB5E2Glu40.2%0.0
SMP0382Glu40.2%0.0
VES0541ACh3.50.2%0.0
ATL0371ACh3.50.2%0.0
SLP0791Glu3.50.2%0.0
FB4X2Glu3.50.2%0.0
FB5B3Glu3.50.2%0.2
CB11283GABA3.50.2%0.2
SMP5952Glu3.50.2%0.0
FB5I2Glu3.50.2%0.0
CB41502ACh3.50.2%0.0
SMP0481ACh30.2%0.0
SMP0191ACh30.2%0.0
SLP0761Glu30.2%0.0
CB41192Glu30.2%0.7
SMP1482GABA30.2%0.3
SMP1451unc30.2%0.0
CB33392ACh30.2%0.0
CRE0762ACh30.2%0.0
FB1H2DA30.2%0.0
CB11483Glu30.2%0.4
SMP0184ACh30.2%0.4
ATL0093GABA30.2%0.1
CRE0422GABA30.2%0.0
ATL0292ACh30.2%0.0
LAL0041ACh2.50.1%0.0
CRE0661ACh2.50.1%0.0
SMP568_c1ACh2.50.1%0.0
CB17331Glu2.50.1%0.0
CB18412ACh2.50.1%0.2
LAL030_a2ACh2.50.1%0.0
LAL0352ACh2.50.1%0.0
FB2M_b2Glu2.50.1%0.0
CRE003_b3ACh2.50.1%0.3
LAL0504GABA2.50.1%0.3
LAL030_b4ACh2.50.1%0.3
CRE0902ACh2.50.1%0.0
SMP3901ACh20.1%0.0
MBON351ACh20.1%0.0
PPL1071DA20.1%0.0
PAM042DA20.1%0.5
FB2M_a2Glu20.1%0.5
CRE0922ACh20.1%0.5
FB4P_a2Glu20.1%0.0
CB41384Glu20.1%0.0
LAL0112ACh20.1%0.0
SIP003_a2ACh20.1%0.0
SMP0102Glu20.1%0.0
CRE0062Glu20.1%0.0
SMP0812Glu20.1%0.0
MBON042Glu20.1%0.0
IB0202ACh20.1%0.0
CB20352ACh20.1%0.0
PLP2472Glu20.1%0.0
CB23571GABA1.50.1%0.0
SLP0781Glu1.50.1%0.0
FB4D_a1Glu1.50.1%0.0
SMP2271Glu1.50.1%0.0
CRE0561GABA1.50.1%0.0
LAL030d1ACh1.50.1%0.0
SMP5711ACh1.50.1%0.0
SMP532_a1Glu1.50.1%0.0
SMP0451Glu1.50.1%0.0
ATL0311unc1.50.1%0.0
SMP153_a1ACh1.50.1%0.0
SMP4571ACh1.50.1%0.0
CB27842GABA1.50.1%0.3
OA-VUMa6 (M)1OA1.50.1%0.0
PLP0262GABA1.50.1%0.3
CL0211ACh1.50.1%0.0
LAL0522Glu1.50.1%0.0
SMP1432unc1.50.1%0.0
SMP4892ACh1.50.1%0.0
SIP0652Glu1.50.1%0.0
CB25502ACh1.50.1%0.0
SMP011_b2Glu1.50.1%0.0
ATL0022Glu1.50.1%0.0
LAL1822ACh1.50.1%0.0
CRE0203ACh1.50.1%0.0
CRE003_a3ACh1.50.1%0.0
SMP1513GABA1.50.1%0.0
FB6A_b1Glu10.1%0.0
SMP5421Glu10.1%0.0
CRE200m1Glu10.1%0.0
CRE0051ACh10.1%0.0
CRE0991ACh10.1%0.0
CB13611Glu10.1%0.0
SIP074_b1ACh10.1%0.0
FB2C1Glu10.1%0.0
LHPV5j11ACh10.1%0.0
LHPD2a4_a1ACh10.1%0.0
FB2F_a1Glu10.1%0.0
SMP1111ACh10.1%0.0
SMP0851Glu10.1%0.0
SMP0821Glu10.1%0.0
FB4F_a1Glu10.1%0.0
FB4J1Glu10.1%0.0
CB32521Glu10.1%0.0
CB39101ACh10.1%0.0
CRE0851ACh10.1%0.0
FB5Y_b1Glu10.1%0.0
P1_8a1ACh10.1%0.0
SLP4731ACh10.1%0.0
LHPV10b11ACh10.1%0.0
FB1G1ACh10.1%0.0
AOTU0351Glu10.1%0.0
SMP1991ACh10.1%0.0
CRE0751Glu10.1%0.0
ATL0281ACh10.1%0.0
SMP1151Glu10.1%0.0
CB20881ACh10.1%0.0
SLP3981ACh10.1%0.0
CB23281Glu10.1%0.0
FB4A_a1Glu10.1%0.0
FB2K1Glu10.1%0.0
CRE0521GABA10.1%0.0
SLP3441Glu10.1%0.0
CB18711Glu10.1%0.0
SMP5671ACh10.1%0.0
FB5V_a1Glu10.1%0.0
SMP1161Glu10.1%0.0
SMP5801ACh10.1%0.0
LoVP741ACh10.1%0.0
SMP2351Glu10.1%0.0
SMP0511ACh10.1%0.0
SMP011_a1Glu10.1%0.0
mALD11GABA10.1%0.0
AVLP0321ACh10.1%0.0
SMP2541ACh10.1%0.0
SMP371_b1Glu10.1%0.0
FB5V_c2Glu10.1%0.0
FB5P2Glu10.1%0.0
PLP2462ACh10.1%0.0
SMP3772ACh10.1%0.0
CRE0132GABA10.1%0.0
SMP248_d2ACh10.1%0.0
SMP0172ACh10.1%0.0
ATL0332Glu10.1%0.0
SIP0322ACh10.1%0.0
SMP0692Glu10.1%0.0
SIP0872unc10.1%0.0
ATL0382ACh10.1%0.0
SLP4611ACh0.50.0%0.0
SMP3761Glu0.50.0%0.0
ATL0431unc0.50.0%0.0
LHPV10d11ACh0.50.0%0.0
LAL0401GABA0.50.0%0.0
SMP5781GABA0.50.0%0.0
SLP088_a1Glu0.50.0%0.0
SIP0041ACh0.50.0%0.0
ATL0131ACh0.50.0%0.0
CB19351Glu0.50.0%0.0
PAM011DA0.50.0%0.0
SIP042_b1Glu0.50.0%0.0
CB21361Glu0.50.0%0.0
PAM061DA0.50.0%0.0
LoVP831ACh0.50.0%0.0
SMP0551Glu0.50.0%0.0
SLP2451ACh0.50.0%0.0
SMP0721Glu0.50.0%0.0
CB33911Glu0.50.0%0.0
FB2F_d1Glu0.50.0%0.0
AOTU0221GABA0.50.0%0.0
SMP1801ACh0.50.0%0.0
CRE0951ACh0.50.0%0.0
aIPg_m21ACh0.50.0%0.0
CRE0191ACh0.50.0%0.0
ATL0391ACh0.50.0%0.0
CB22301Glu0.50.0%0.0
FB2G_a1Glu0.50.0%0.0
SLP0871Glu0.50.0%0.0
SMP0591Glu0.50.0%0.0
PLP0281unc0.50.0%0.0
AOTU0471Glu0.50.0%0.0
SMP248_a1ACh0.50.0%0.0
FB4A_b1Glu0.50.0%0.0
SMP568_a1ACh0.50.0%0.0
AVLP4961ACh0.50.0%0.0
ATL0251ACh0.50.0%0.0
LAL1551ACh0.50.0%0.0
LHPD2c71Glu0.50.0%0.0
LNd_c1ACh0.50.0%0.0
ATL0321unc0.50.0%0.0
ATL0181ACh0.50.0%0.0
AVLP0151Glu0.50.0%0.0
LAL1461Glu0.50.0%0.0
SMP2371ACh0.50.0%0.0
CRE0771ACh0.50.0%0.0
PPL1031DA0.50.0%0.0
SMP1771ACh0.50.0%0.0
OA-VPM31OA0.50.0%0.0
CB26381ACh0.50.0%0.0
ATL0191ACh0.50.0%0.0
SMP4771ACh0.50.0%0.0
SMP0751Glu0.50.0%0.0
ATL0171Glu0.50.0%0.0
SIP0861Glu0.50.0%0.0
ExR315-HT0.50.0%0.0
SMP0911GABA0.50.0%0.0
CRE0261Glu0.50.0%0.0
CB23411ACh0.50.0%0.0
ATL0221ACh0.50.0%0.0
SMP0891Glu0.50.0%0.0
AVLP475_b1Glu0.50.0%0.0
CL0111Glu0.50.0%0.0
SMP371_a1Glu0.50.0%0.0
LAL0321ACh0.50.0%0.0
SMP0091ACh0.50.0%0.0
SMP3231ACh0.50.0%0.0
CB30501ACh0.50.0%0.0
SMP4481Glu0.50.0%0.0
SIP0181Glu0.50.0%0.0
SIP003_b1ACh0.50.0%0.0
SMP016_b1ACh0.50.0%0.0
SMP1501Glu0.50.0%0.0
CRE0101Glu0.50.0%0.0
SMP3701Glu0.50.0%0.0
SMP016_a1ACh0.50.0%0.0
ATL0201ACh0.50.0%0.0
LAL1501Glu0.50.0%0.0
CB11681Glu0.50.0%0.0
SLP0641Glu0.50.0%0.0
SMP248_c1ACh0.50.0%0.0
IB0171ACh0.50.0%0.0
SLP0011Glu0.50.0%0.0
SMP0301ACh0.50.0%0.0
FB2B_a1unc0.50.0%0.0
CB13551ACh0.50.0%0.0
CB39091ACh0.50.0%0.0
SLP360_d1ACh0.50.0%0.0
CRE1031ACh0.50.0%0.0
FB4D_c1Glu0.50.0%0.0
PLP0661ACh0.50.0%0.0
FB4Q_a1Glu0.50.0%0.0
CL086_e1ACh0.50.0%0.0
LAL1751ACh0.50.0%0.0
PLP0711ACh0.50.0%0.0
SMP0531Glu0.50.0%0.0
SLP0751Glu0.50.0%0.0
MeVP351Glu0.50.0%0.0
ATL0411ACh0.50.0%0.0
FB4M1DA0.50.0%0.0
ATL0341Glu0.50.0%0.0
NPFL1-I1unc0.50.0%0.0
M_l2PNm141ACh0.50.0%0.0
SMP4561ACh0.50.0%0.0
MeVC91ACh0.50.0%0.0
AOTU0421GABA0.50.0%0.0
PPL2011DA0.50.0%0.0